Clone Sequence Records
BS07043.3prime Sequence
956 bp (819 high quality bases) assembled on 2006-01-06
> BS07043.3prime
ATGGTCTAGAAAGCTTCTAGGTGCGGAACTTGACGCTCTTCGTGACGCCG
GCCTTGATGCCGGACAATTCGCCGCCGTAGCGCTGCAGCTCCTTGCGCAC
CGTGCGCACGGCTCCCTTGCGCCGGATGAGCGCCTTTCGGTATTTGCCGC
GATGCTTAACGCGCGGATTGCGCAGCTCCTTTTTGCGGTGCGGCGTGAGG
CCCTTGTTCTTGGCCATCTGATAGGTGATGCCGCGTCGCGCATCCTCCTC
TTCCTCCTCCTCACCAGCCTCCTCTTGCAGATCCTTCTCCTTACTCTCAG
CATCGTCATCGTCATCATTATCATCATCATCGGAGCTCACTGACGCCTGC
TGGCCATCGTTGTACTTGTTGAGTATCTGCAGCTTAGCCTTGCGCTGTGC
CACATCCAGCACGGTGAATGCATCGCCATCTTCAATCCTCTCCAGCAGCG
CCTCCAGCTGCGGTCGAATGTATTCCTCGTAGCGCGGCTTAAGCTCCTCG
ATCAGATCCTTGAGTTGCACCAGCCGCCTAATCACCGGATGGGCCTTGAC
GTCGATGCGACGTGCCTTGAGCAGCAGATAGAAAGCCACATTGGAGCAGT
AGGTGGTGAGCACGGTGTGGCAGAGTCCGGCATATTGCAGCGCCGGCACC
ATGGGCACATCGTGTTTGCGAACGTAGTTGAGCACCGGTTTCAATAGGTT
CTTCACCTCGTCGAGATGCTGTTGAAAATCCTGGGTGAGAATGATGAACT
CCGGCGACTCACTGTGCATCAGCTGTCGTCGCTCGCGTTCTGATAGGCCG
GCCAGATCGCTGGTCACTTTGGTTATATGGCTCAGCTCGTTGTCATCACT
GCTGCCTGCGGGCGCTGCTTCTACATTGTCCAGCTGGAAATCGGCCTCGC
TCATGCGCTTGGGCAGACGCAGCTGGATCTTTTTGGGCTCCTCCTCCTCG
GCGCGT
BS07043.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4202-PA | 1287 | Sas10-RA | 348..1287 | 956..17 | 4650 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 00:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas10-RA | 1663 | CG4202-RA | 443..1382 | 956..17 | 4670 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 00:50:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5317851..5318790 | 956..17 | 4670 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-09 00:50:51 has no hits.
BS07043.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:00:13 Download gff for
BS07043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-PA | 348..1287 | 17..956 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:45:47 Download gff for
BS07043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4202-PA | 348..1287 | 17..956 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:49:04 Download gff for
BS07043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 443..1385 | 10..956 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:04:35 Download gff for
BS07043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 443..1385 | 10..956 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:04:35 Download gff for
BS07043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5317851..5318793 | 10..956 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:49:04 Download gff for
BS07043.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5211884..5212826 | 10..956 | 99 | | Minus |
BS07043.5prime Sequence
864 bp (863 high quality bases) assembled on 2006-01-06
> BS07043.5prime
GAAGTTATCAGTCGACATGGACAGCGACGGTGACGACTACGTGATGAGCG
GCTCCGACCAGGAGTACGATGACGAGGAGCGCGAAATACTCGAAGATCTG
CGCAAGCAGCGCAAAAAGCCACATGATCCCGTCCAGGAAGTGCTCGGTTT
CAGTGATGATGACGACGACGACGACGACGACGACGAGGAGGAGCAGCAGG
ATGTGGCGGAACTGATGCGCGACAGTGACATCGAGGGCGCCGAAGACGAT
GACCGCGATCTGCCCAACACCATGGACTGGGGCAGCAAACGGAGCACGTA
CTACAACACCGACTTTGTGGACCAGGACTACAGCAGCTACAATGCCCAGG
AGGAGGAGCAGGCACGCGCCGAGGAGGAGGAGGCCAAAAAGATCCAGCTG
CGTCTGGCCAAGCGCATGAGCGAGGCCGATTTCCAGCTGGACAATGTAGA
AGCAGCGCCCGCAGGCAGCAGTGATGACAACGAGCTGAGCCATATAACCA
AAGTGACCAGCGATCTGGCCGGCCTATCAGAACGCGAGCGACGACAGCTG
ATGCACAGTGAGTCGCCGGAGTTCATCATTCTCACCCAGGATTTTCAACA
GCATCTCGACGAGGTGAAGAACCTATTGAAACCGGTGCTCAACTACGTTC
GCAAACACGATGTGCCCATGGTGCCGGCGCTGCAATATGCCGGACTCTGC
CACACCGTGCTCACCACCTACTGCTCCAATGTGGCTTTCTATCTGCTGCT
CAAGGCACGTCGCATCGACGTCAAGGCCCATCCGGTGATTAGGCGGCTGG
TGCAACTCAAGGATCTGATCGAGGAGCTTAAGCCGCGCTACGAGGAATAC
ATTCGACCGCAGCT
BS07043.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4202-PA | 1287 | Sas10-RA | 1..848 | 17..864 | 4240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:26:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas10-RA | 1663 | CG4202-RA | 96..943 | 17..864 | 4240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:26:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5317504..5318351 | 17..864 | 4240 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:26:06 has no hits.
BS07043.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:00:13 Download gff for
BS07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-PA | 1..848 | 17..864 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:45:50 Download gff for
BS07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4202-PA | 1..848 | 17..864 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:28:14 Download gff for
BS07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 91..943 | 10..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:56:53 Download gff for
BS07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 91..943 | 10..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:56:53 Download gff for
BS07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5317499..5318351 | 10..864 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:28:14 Download gff for
BS07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5211532..5212384 | 10..864 | 99 | | Plus |
BS07043.complete Sequence
1319 bp (1319 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635702
> BS07043.complete
GAAGTTATCAGTCGACATGGACAGCGACGGTGACGACTACGTGATGAGCG
GCTCCGACCAGGAGTACGATGACGAGGAGCGCGAAATACTCGAAGATCTG
CGCAAGCAGCGCAAAAAGCCACATGATCCCGTCCAGGAAGTGCTCGGTTT
CAGTGATGATGACGACGACGACGACGACGACGACGAGGAGGAGCAGCAGG
ATGTGGCGGAACTGATGCGCGACAGTGACATCGAGGGCGCCGAAGACGAT
GACCGCGATCTGCCCAACACCATGGACTGGGGCAGCAAACGGAGCACGTA
CTACAACACCGACTTTGTGGACCAGGACTACAGCAGCTACAATGCCCAGG
AGGAGGAGCAGGCACGCGCCGAGGAGGAGGAGGCCAAAAAGATCCAGCTG
CGTCTGGCCAAGCGCATGAGCGAGGCCGATTTCCAGCTGGACAATGTAGA
AGCAGCGCCCGCAGGCAGCAGTGATGACAACGAGCTGAGCCATATAACCA
AAGTGACCAGCGATCTGGCCGGCCTATCAGAACGCGAGCGACGACAGCTG
ATGCACAGTGAGTCGCCGGAGTTCATCATTCTCACCCAGGATTTTCAACA
GCATCTCGACGAGGTGAAGAACCTATTGAAACCGGTGCTCAACTACGTTC
GCAAACACGATGTGCCCATGGTGCCGGCGCTGCAATATGCCGGACTCTGC
CACACCGTGCTCACCACCTACTGCTCCAATGTGGCTTTCTATCTGCTGCT
CAAGGCACGTCGCATCGACGTCAAGGCCCATCCGGTGATTAGGCGGCTGG
TGCAACTCAAGGATCTGATCGAGGAGCTTAAGCCGCGCTACGAGGAATAC
ATTCGACCGCAGCTGGAGGCGCTGCTGGAGAGGATTGAAGATGGCGATGC
ATTCACCGTGCTGGATGTGGCACAGCGCAAGGCTAAGCTGCAGATACTCA
ACAAGTACAACGATGGCCAGCAGGCGTCAGTGAGCTCCGATGATGATGAT
AATGATGACGATGACGATGCTGAGAGTAAGGAGAAGGATCTGCAAGAGGA
GGCTGGTGAGGAGGAGGAAGAGGAGGATGCGCGACGCGGCATCACCTATC
AGATGGCCAAGAACAAGGGCCTCACGCCGCACCGCAAAAAGGAGCTGCGC
AATCCGCGCGTTAAGCATCGCGGCAAATACCGAAAGGCGCTCATCCGGCG
CAAGGGAGCCGTGCGCACGGTGCGCAAGGAGCTGCAGCGCTACGGCGGCG
AATTGTCCGGCATCAAGGCCGGCGTCACGAAGAGCGTCAAGTTCCGCACC
TAGAAGCTTTCTAGACCAT
BS07043.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:23:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas10-RA | 1287 | CG4202-PA | 1..1287 | 17..1303 | 6435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas10-RA | 1663 | CG4202-RA | 96..1382 | 17..1303 | 6435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:23:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5317504..5318790 | 17..1303 | 6435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:23:49 has no hits.
BS07043.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:06 Download gff for
BS07043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 1..1287 | 17..1303 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:19 Download gff for
BS07043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 71..1365 | 10..1310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:18:10 Download gff for
BS07043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 96..1382 | 17..1303 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:06 Download gff for
BS07043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 71..1365 | 10..1310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:41 Download gff for
BS07043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas10-RA | 96..1382 | 17..1303 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:20:41 Download gff for
BS07043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5317504..5318790 | 17..1303 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:18:10 Download gff for
BS07043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5211537..5212823 | 17..1303 | 100 | | Plus |
BS07043.pep Sequence
Translation from 16 to 1302
> BS07043.pep
MDSDGDDYVMSGSDQEYDDEEREILEDLRKQRKKPHDPVQEVLGFSDDDD
DDDDDDEEEQQDVAELMRDSDIEGAEDDDRDLPNTMDWGSKRSTYYNTDF
VDQDYSSYNAQEEEQARAEEEEAKKIQLRLAKRMSEADFQLDNVEAAPAG
SSDDNELSHITKVTSDLAGLSERERRQLMHSESPEFIILTQDFQQHLDEV
KNLLKPVLNYVRKHDVPMVPALQYAGLCHTVLTTYCSNVAFYLLLKARRI
DVKAHPVIRRLVQLKDLIEELKPRYEEYIRPQLEALLERIEDGDAFTVLD
VAQRKAKLQILNKYNDGQQASVSSDDDDNDDDDDAESKEKDLQEEAGEEE
EEEDARRGITYQMAKNKGLTPHRKKELRNPRVKHRGKYRKALIRRKGAVR
TVRKELQRYGGELSGIKAGVTKSVKFRT*
BS07043.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas10-PA | 428 | CG4202-PA | 1..428 | 1..428 | 2202 | 100 | Plus |
