Clone BS07051 Report

Search the DGRC for BS07051

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:70
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptatl-RA
Protein status:BS07051.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07051.3prime Sequence

873 bp (784 high quality bases) assembled on 2006-01-06

> BS07051.3prime
ATGGTCTAGAAAGCTTTCATGACCGCTTCACCTTGCCATTGGACGCATTC
ACCGAGGTCTGGGAGCGGTAGGAGGCTGCGCCTCCGCCGACAGCCATTTC
GGTCGCATGAGTGGCAACATGGTGGATGCCCTTCTCCATGCAGCCGTGAT
AGATGGGTCGCATGAATTTCTCCCACAATAGCGTTGCAAAGTCATCCAAC
TTGCCGCCAAAGTCGCTGAGCTCTCCGCTATATCTAATGTAGGCCCACAG
AGCCAGCGTTAGAAGCGCCACACCCATAACCAGGTTGCAGAAGTTGGCGA
ACGTATAGAGACCCACCAATCCAAAGATGCCGCTAAGGATGTACATGATG
ACGGCGCAGGCGAAGTACACCGCCGGTGTCCGTGCTGCCTTAAAGATGTT
CTTGCTCTCGTTGTGTGCTTGGTAGTTGGTGAAGACCTCCTCAAGATCAT
CTTCCAGTTGCTTGCGGAATTTCTCGGTGAACTCCTCACCACCCATCTTG
CGCTTGGCGGCGAACTGGAACAGTGCCTTGTCCTTCACCCGCAGGTGCTC
CGTCTGGAGATGGGCGGTGCTTAAGTACGGCCGCGTTCCACCGCACACCT
CCTCCATGAGCTGTCCGTACAGCTCCTTGGCGGCGGCCACGGCAGTCAAA
TGGTTAGCCTCTGCGGTGGCCACCAGCATGCTCTTCGGCTCGGGCAGCTC
GTTGCCCTTGTAGATGTTCATGTACGATTGGAAGTACTGGATGAGATCGC
GGGCCCGCACCCGCTGTCCGCTGATCTCCTTGTAGACAAGGTTGTCCGGT
GCCAGCAGCATGGGCACCAGGGAGCGCAGGCTACTCTTAAACTCGGGCGT
GATGTCCTGCAGCCGACCGTCAA

BS07051.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG6668-PA 1626 atl-RA 770..1626 873..17 4285 100 Minus
CG6668-PB 1626 atl-RB 770..1626 873..17 4285 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
atl-RC 2907 CG6668-RC 1044..1900 873..17 4285 100 Minus
atl-RB 3207 CG6668-RB 1344..2200 873..17 4285 100 Minus
atl-RA 2889 CG6668-RA 1026..1882 873..17 4285 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24632731..24633370 873..234 3200 100 Minus
3R 32079331 3R 24633558..24633707 166..17 750 100 Minus
3R 32079331 3R 24633431..24633499 235..167 345 100 Minus
Blast to na_te.dros performed on 2015-02-11 10:05:20 has no hits.

BS07051.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:00:30 Download gff for BS07051.3prime
Subject Subject Range Query Range Percent Splice Strand
atl-PA 772..1626 17..871 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:46:13 Download gff for BS07051.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6668-PB 772..1626 17..871 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:02:40 Download gff for BS07051.3prime
Subject Subject Range Query Range Percent Splice Strand
atl-RA 1028..1882 17..871 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:03:31 Download gff for BS07051.3prime
Subject Subject Range Query Range Percent Splice Strand
atl-RA 1028..1882 17..871 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:03:31 Download gff for BS07051.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24633558..24633707 17..166 100   Minus
3R 24632733..24633370 234..871 100 -> Minus
3R 24633433..24633499 167..233 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:02:40 Download gff for BS07051.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20458455..20459092 234..871 100 -> Minus
arm_3R 20459155..20459221 167..233 100 -> Minus
arm_3R 20459280..20459429 17..166 100   Minus

BS07051.5prime Sequence

862 bp (767 high quality bases) assembled on 2006-01-06

> BS07051.5prime
GAAGTTATCAGTCGACATGGGCGGATCGGCAGTGCAGGTGATCAACGCCT
CCGAGGAGCACACATTTGTGCTCAACGAGGATGCGCTGAGTGAGGTCCTA
ATGCGGGATGAGGTCAAGGATCGGTTCGTCTGCGTTGTCTCCGTGGCTGG
AGCCTTCCGAAAGGGCAAGAGCTTCCTGCTGGACTTTTTTCTGCGCTATA
TGTATTCAAAGTATGTGCATCACGATGCGACAGACTGGCTGGGAGGCGAA
TCAGATCCGCTGGAGGGTTTCTCCTGGCGCGGCGGATCTGAGCGCGACAC
CACCGGCATTCTCATGTGGTCCGACATATTCCTGCACGACTATCCCAACG
GCGACAAGATAGCCATCATTCTGCTGGACACACAGGGCGCCTTCGACAGC
CAGAGCACGGTGCGCGATTGTGCCACCGTTTTTGCGTTGAGCACAATGCT
GTCCTCGGTGCAGATATACAACCTGTCACAGAACATCCAGGAGGACGACC
TGCAGCACCTGCAGCTCTTCACTGAGTATGGTCGCCTCGCGCTGGCCGAC
ACCGGCAAAAAGCCGTTCCAGCGTCTGCAGTTCCTCGTCCGGGACTGGAG
CTTTCCCTACGAGGCGGAATATGGTGCACTGGGCGGGGATAAGATTCTGA
AACGACGTCTGGAGGTGTCCGACAAACAGCACCCAGAACTACAGTCCCTG
CGTCGCCACATTTCGTCCTGTTTCACGGAGGTGGCCTGCTTCCTGATGCC
CCATCCAGGTCTCAATGTGGCCACCAATCCTAAATTTGACGGTCGGCTGC
AGGACATCACGCCCGAGTTTAAGAGTAGCCTGCGCTCCCTGGTGCCCATG
CTGCTGGCACCG

BS07051.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG6668-PA 1626 atl-RA 1..846 17..862 4230 100 Plus
CG6668-PB 1626 atl-RB 1..846 17..862 4230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:37:23
Subject Length Description Subject Range Query Range Score Percent Strand
atl-RC 2907 CG6668-RC 275..1120 17..862 4230 100 Plus
atl-RB 3207 CG6668-RB 575..1420 17..862 4230 100 Plus
atl-RA 2889 CG6668-RA 257..1102 17..862 4230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24632155..24632807 210..862 3265 100 Plus
3R 32079331 3R 24631897..24632091 17..211 975 100 Plus
Blast to na_te.dros performed on 2015-02-12 12:37:20 has no hits.

BS07051.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:00:31 Download gff for BS07051.5prime
Subject Subject Range Query Range Percent Splice Strand
atl-PA 1..846 17..862 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:46:15 Download gff for BS07051.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6668-PB 1..846 17..862 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:02:09 Download gff for BS07051.5prime
Subject Subject Range Query Range Percent Splice Strand
atl-RA 253..1102 9..862 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:08:52 Download gff for BS07051.5prime
Subject Subject Range Query Range Percent Splice Strand
atl-RA 253..1102 9..862 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:08:52 Download gff for BS07051.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24631893..24632091 16..211 98 -> Plus
3R 24632157..24632807 212..862 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:02:09 Download gff for BS07051.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20457615..20457813 16..211 98 -> Plus
arm_3R 20457879..20458529 212..862 100   Plus

BS07051.complete Sequence

1658 bp (1658 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635706

> BS07051.complete
GAAGTTATCAGTCGACATGGGCGGATCGGCAGTGCAGGTGATCAACGCCT
CCGAGGAGCACACATTTGTGCTCAACGAGGATGCGCTGAGTGAGGTCCTA
ATGCGGGATGAGGTCAAGGATCGGTTCGTCTGCGTTGTCTCCGTGGCTGG
AGCCTTCCGAAAGGGCAAGAGCTTCCTGCTGGACTTTTTTCTGCGCTATA
TGTATTCAAAGTATGTGCATCACGATGCGACAGACTGGCTGGGAGGCGAA
TCAGATCCGCTGGAGGGTTTCTCCTGGCGCGGCGGATCTGAGCGCGACAC
CACCGGCATTCTCATGTGGTCCGACATATTCCTGCACGACTATCCCAACG
GCGACAAGATAGCCATCATTCTGCTGGACACACAGGGCGCCTTCGACAGC
CAGAGCACGGTGCGCGATTGTGCCACCGTTTTTGCGTTGAGCACAATGCT
GTCCTCGGTGCAGATATACAACCTGTCACAGAACATCCAGGAGGACGACC
TGCAGCACCTGCAGCTCTTCACTGAGTATGGTCGCCTCGCGCTGGCCGAC
ACCGGCAAAAAGCCGTTCCAGCGTCTGCAGTTCCTCGTCCGGGACTGGAG
CTTTCCCTACGAGGCGGAATATGGTGCACTGGGCGGGGATAAGATTCTGA
AACGACGTCTGGAGGTGTCCGACAAACAGCACCCAGAACTACAGTCCCTG
CGTCGCCACATTTCGTCCTGTTTCACGGAGGTGGCCTGCTTCCTGATGCC
CCATCCAGGTCTCAATGTGGCCACCAATCCTAAATTTGACGGTCGGCTGC
AGGACATCACGCCCGAGTTTAAGAGTAGCCTGCGCTCCCTGGTGCCCATG
CTGCTGGCACCGGACAACCTTGTCTACAAGGAGATCAGCGGACAGCGGGT
GCGGGCCCGCGATCTCATCCAGTACTTCCAATCGTACATGAACATCTACA
AGGGCAACGAGCTGCCCGAGCCGAAGAGCATGCTGGTGGCCACCGCAGAG
GCTAACCATTTGACTGCCGTGGCCGCCGCCAAGGAGCTGTACGGACAGCT
CATGGAGGAGGTGTGCGGTGGAACGCGGCCGTACTTAAGCACCGCCCATC
TCCAGACGGAGCACCTGCGGGTGAAGGACAAGGCACTGTTCCAGTTCGCC
GCCAAGCGCAAGATGGGTGGTGAGGAGTTCACCGAGAAATTCCGCAAGCA
ACTGGAAGATGATCTTGAGGAGGTCTTCACCAACTACCAAGCACACAACG
AGAGCAAGAACATCTTTAAGGCAGCACGGACACCGGCGGTGTACTTCGCC
TGCGCCGTCATCATGTACATCCTTAGCGGCATCTTTGGATTGGTGGGTCT
CTATACGTTCGCCAACTTCTGCAACCTGGTTATGGGTGTGGCGCTTCTAA
CGCTGGCTCTGTGGGCCTACATTAGATATAGCGGAGAGCTCAGCGACTTT
GGCGGCAAGTTGGATGACTTTGCAACGCTATTGTGGGAGAAATTCATGCG
ACCCATCTATCACGGCTGCATGGAGAAGGGCATCCACCATGTTGCCACTC
ATGCGACCGAAATGGCTGTCGGCGGAGGCGCAGCCTCCTACCGCTCCCAG
ACCTCGGTGAATGCGTCCAATGGCAAGGTGAAGCGGTCATGAAAGCTTTC
TAGACCAT

BS07051.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
atl-RC 1626 CG6668-PC 1..1626 17..1642 8130 100 Plus
atl-RB 1626 CG6668-PB 1..1626 17..1642 8130 100 Plus
atl-RA 1626 CG6668-PA 1..1626 17..1642 8130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
atl-RC 2907 CG6668-RC 275..1900 17..1642 8130 100 Plus
atl-RB 3207 CG6668-RB 575..2200 17..1642 8130 100 Plus
atl-RA 2889 CG6668-RA 257..1882 17..1642 8130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24632155..24633370 210..1425 6080 100 Plus
3R 32079331 3R 24631897..24632091 17..211 975 100 Plus
3R 32079331 3R 24633558..24633707 1493..1642 750 100 Plus
3R 32079331 3R 24633431..24633499 1424..1492 345 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:55:56 has no hits.

BS07051.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:16 Download gff for BS07051.complete
Subject Subject Range Query Range Percent Splice Strand
atl-RB 1..1626 17..1642 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:49:51 Download gff for BS07051.complete
Subject Subject Range Query Range Percent Splice Strand
atl-RB 566..2195 9..1642 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:41:44 Download gff for BS07051.complete
Subject Subject Range Query Range Percent Splice Strand
atl-RA 257..1881 17..1641 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:16 Download gff for BS07051.complete
Subject Subject Range Query Range Percent Splice Strand
atl-RB 566..2195 9..1642 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:11:08 Download gff for BS07051.complete
Subject Subject Range Query Range Percent Splice Strand
atl-RA 257..1881 17..1641 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:11:08 Download gff for BS07051.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24631897..24632091 17..211 100 -> Plus
3R 24632157..24633370 212..1425 100 -> Plus
3R 24633433..24633499 1426..1492 100 -> Plus
3R 24633558..24633706 1493..1641 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:41:44 Download gff for BS07051.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20457619..20457813 17..211 100 -> Plus
arm_3R 20457879..20459092 212..1425 100 -> Plus
arm_3R 20459155..20459221 1426..1492 100 -> Plus
arm_3R 20459280..20459428 1493..1641 100   Plus

BS07051.pep Sequence

Translation from 16 to 1641

> BS07051.pep
MGGSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKG
KSFLLDFFLRYMYSKYVHHDATDWLGGESDPLEGFSWRGGSERDTTGILM
WSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVFALSTMLSSVQI
YNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYEA
EYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLN
VATNPKFDGRLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDL
IQYFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVC
GGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDL
EEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFAN
FCNLVMGVALLTLALWAYIRYSGELSDFGGKLDDFATLLWEKFMRPIYHG
CMEKGIHHVATHATEMAVGGGAASYRSQTSVNASNGKVKRS*

BS07051.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:23:36
Subject Length Description Subject Range Query Range Score Percent Strand
atl-PC 541 CG6668-PC 1..541 1..541 2819 100 Plus
atl-PB 541 CG6668-PB 1..541 1..541 2819 100 Plus
atl-PA 541 CG6668-PA 1..541 1..541 2819 100 Plus