Clone BS07074 Report

Search the DGRC for BS07074

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:70
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG7148-RA
Protein status:BS07074.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07074.3prime Sequence

943 bp (841 high quality bases) assembled on 2006-01-06

> BS07074.3prime
ATGGTCTAGAAAGCTTTCAGTGAAATTCAAATTGGTATCCGCGGTCCACA
AAGCTCAGACCGCGTTCCGAGTCGACTGGAAAGTCGGCGGTGAAGACAAT
ATATCCTCTATATTCCAAAGAGCTCTTTAGGTTCGCTCTATCCACAAAGT
CCTCAAAGCCACTTAGGTCGTAGTAGAGCTTCAGAGGTGGCGAACGTCCA
ACTCCCGTCTTCTGCTTGAACGGCTCCCGCCGCTTAAGAATACTCAAGGC
CCGTGGCAAAAATGTTGGCGTCAGATTTCGGCAGTAGGACACGTCGAGGT
GTTCCAATCGTGGACAGAGTTCCACGAATTCTAAGAGGATTTCGTCGCTT
AGGTCATTCCAGTTGCGCACGCAGAGCAGCTGCAGCTCTGTCATACAGGT
ATAGCGCTTTAGGTAGTCTGCCGAATGAGTCCAGCTGCAAATGGCCAGGC
GCTTCAGCCTGCGATGCGTCCAGATGGGCAGCTTCTCATCCCAGCCCGGT
TCAAGGGGCATATAGTACCCGTCCACGGCAAAGCCGACGATGTCCTTGGC
CTTGAAAGCCATGATCTCGTAGAACTCGCTGACCTCGCGGATCTTGTGGT
CATAGCTATCCGGACTGACCAGCGGGGGGATATGCCACTCGTTGTCCAGC
AGCACCACCAGTTTCCTGAGGGAGGGCAGCTCCAGAACGGCGGGTAGAAT
GGGTTTCAAGGTGGCCAGATTGAGCTTAAGATCAGTGAGGTTCTTAAAGC
TCTGCAGGCAGTTTCCCAGCTGAAGTTTACTGATCATATCGTACGTCCTA
ATGTCCAGGACCCGAAGATCGTGCAGCGTGCGGCACACCTCGTCCAGGTA
CTTCTGCTGCAGCTCAAACGCCTTGTGCTGGTCCTCGTAGAGGTGCAGCT
CCTGCANGTGCTGGAAGTTGGATAGGTACCGCCCGTCGATGGG

BS07074.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 1365 CG7148-RA 439..1365 943..17 4616 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1594 CG7148-RA 596..1522 943..17 4624 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21830790..21831487 134..831 3490 100 Plus
3L 28110227 3L 21830616..21830733 17..134 590 100 Plus
3L 28110227 3L 21831546..21831658 831..943 554 99.1 Plus
Blast to na_te.dros performed on 2015-02-10 19:01:39 has no hits.

BS07074.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:01:15 Download gff for BS07074.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 439..1365 17..943 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:47:16 Download gff for BS07074.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 439..1365 17..943 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:09:56 Download gff for BS07074.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 596..1525 12..943 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:22:31 Download gff for BS07074.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 596..1525 12..943 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:22:31 Download gff for BS07074.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21830613..21830732 12..133 97 <- Plus
3L 21830790..21831486 134..830 100 <- Plus
3L 21831546..21831658 831..943 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:09:56 Download gff for BS07074.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21823713..21823832 12..133 97 <- Plus
arm_3L 21823890..21824586 134..830 100 <- Plus
arm_3L 21824646..21824758 831..943 99   Plus

BS07074.5prime Sequence

940 bp (843 high quality bases) assembled on 2006-01-06

> BS07074.5prime
GAAGTTATCAGTCGACATGGCTTCCGAGCCGAGATCCCTAATTCTGCAAT
TGGACGACGACTGTCTGGCCGAGATTTTCGATCGCTTGCAGGACCTGCCG
TCGGAAGTGTCCTTCGCGAGGACTTGCCGGCGAGTGCAGTACATATGTCT
GAGCAAGTGGCGCACCAGCCATGCCTACGAGCAACTGGATCTGGAGAAGT
GGCGGGTACTGTTACCCAATCATGAAGACCTGGTCTACTTCCTAACCCAA
ATGCGTCCGTACATCAGAGAAATGGGCGGCAGCAGCTGTCTGTGCTCCAT
TCTAAAAGATCTGGACGAAATGCACATTGCAGAGCTGCCCATGGTGACCA
GCTTCTACTACGACCCAGACGGCGTCGATTGCTATCCCACGAACCGAAGC
ATCCGCAAGCTGGCCCGCCTGCTGCCGGGCTTGAAAAAGTTGCGCCTTAC
CACACCCATCGACGGGCGGTACCTATCCAACTTCCAGCACCTGCAGGAGC
TGCACCTCTACGAGGACCAGCACAAGGCGTTTGAGCTGCAGCAGAAGTAC
CTGGACGAGGTGTGCCGCACGCTGCACGATCTTCGGGTCCTGGACATTAG
GACGTACGATATGATCAGTAAACTTCAGCTGGGAAACTGCCTGCAGAGCT
TTAAGAACCTCACTGATCTTAAGCTCAATCTGGCCACCTTGAAACCCATT
CTACCCGCCGTTCTGGAGCTGCCCTCCCTCAGGAAACTGGTGGTGCTGCT
GGACAACGAGTGGCATATCCCCCCGCTGGTCAGTCCGGATAGCTATGACC
ACAAGATCCGCGAGGTCAGCGAGTTCTACGAGATCATGGCTTTCAGGGCC
AGGACATCGTCGGGCTTGCCGTGGACGGGTACTATATGCCCCTTTGAACC
GGGCTGGGATGAGAAGCTGCCCATCTGGACGCATCGCAGG

BS07074.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 1365 CG7148-RA 1..835 17..851 4125 99.7 Plus
CG7148-PA 1365 CG7148-RA 878..924 894..940 235 100 Plus
CG7148-PA 1365 CG7148-RA 836..879 851..894 170 95.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1594 CG7148-RA 157..1081 16..940 4520 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21831546..21832097 567..16 2745 99.8 Minus
3L 28110227 3L 21831114..21831487 940..567 1730 98.7 Minus
Blast to na_te.dros performed on 2015-02-11 18:25:50 has no hits.

BS07074.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:01:16 Download gff for BS07074.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 1..924 17..940 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:47:17 Download gff for BS07074.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 1..924 17..940 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:28:10 Download gff for BS07074.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 157..1081 16..940 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:55:41 Download gff for BS07074.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 157..1081 16..940 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:55:41 Download gff for BS07074.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21831114..21831486 568..940 98 <- Minus
3L 21831546..21832097 16..567 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:28:10 Download gff for BS07074.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21824214..21824586 568..940 98 <- Minus
arm_3L 21824646..21825197 16..567 99 -> Minus

BS07074.complete Sequence

1397 bp (1397 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635718

> BS07074.complete
GAAGTTATCAGTCGACATGGCTTCCGAGCCGAGATCCCTAATTCTGCAAT
TGGACGACGACTGTCTGGCCGAGATTTTCGATCGCTTGCAGGACCTGCCG
TCGGAAGTGTCCTTCGCGAGGACTTGCCGGCGAGTGCAGTACATATGTCT
GAGCAAGTGGCGCACCAGCCATGCCTACGAGCAACTGGATCTGGAGAAGT
GGCGGGTACTGTTACCCAATCATGAAGACCTGGTCTACTTCCTAACCCAA
ATGCGTCCGTACATCAGAGAAATGGGCGGCAGCAGCTGTCTGTGCTCCAT
TCTAAAAGATCTGGACGAAATGCACATTGCAGAGCTGCCCATGGTGACCA
GCTTCTACTACGACCCAGACGGCGTCGATTGCTATCCCACGAACCGAAGC
ATCCGCAAGCTGGCCCGCCTGCTGCCGGGCTTGAAAAAGTTGCGCCTTAC
CACACCCATCGACGGGCGGTACCTATCCAACTTCCAGCACCTGCAGGAGC
TGCACCTCTACGAGGACCAGCACAAGGCGTTTGAGCTGCAGCAGAAGTAC
CTGGACGAGGTGTGCCGCACGCTGCACGATCTTCGGGTCCTGGACATTAG
GACGTACGATATGATCAGTAAACTTCAGCTGGGAAACTGCCTGCAGAGCT
TTAAGAACCTCACTGATCTTAAGCTCAATCTGGCCACCTTGAAACCCATT
CTACCCGCCGTTCTGGAGCTGCCCTCCCTCAGGAAACTGGTGGTGCTGCT
GGACAACGAGTGGCATATCCCCCCGCTGGTCAGTCCGGATAGCTATGACC
ACAAGATCCGCGAGGTCAGCGAGTTCTACGAGATCATGGCTTTCAAGGCC
AAGGACATCGTCGGCTTTGCCGTGGACGGGTACTATATGCCCCTTGAACC
GGGCTGGGATGAGAAGCTGCCCATCTGGACGCATCGCAGGCTGAAGCGCC
TGGCCATTTGCAGCTGGACTCATTCGGCAGACTACCTAAAGCGCTATACC
TGTATGACAGAGCTGCAGCTGCTCTGCGTGCGCAACTGGAATGACCTAAG
CGACGAAATCCTCTTAGAATTCGTGGAACTCTGTCCACGATTGGAACACC
TCGACGTGTCCTACTGCCGAAATCTGACGCCAACATTTTTGCCACGGGCC
TTGAGTATTCTTAAGCGGCGGGAGCCGTTCAAGCAGAAGACGGGAGTTGG
ACGTTCGCCACCTCTGAAGCTCTACTACGACCTAAGTGGCTTTGAGGACT
TTGTGGATAGAGCGAACCTAAAGAGCTCTTTGGAATATAGAGGATATATT
GTCTTCACCGCCGACTTTCCAGTCGACTCGGAACGCGGTCTGAGCTTTGT
GGACCGCGGATACCAATTTGAATTTCACTGAAAGCTTTCTAGACCAT

BS07074.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:37:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1365 CG7148-PA 1..1365 17..1381 6810 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1594 CG7148-RA 157..1522 16..1381 6815 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:37:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21830790..21831487 1264..567 3490 100 Minus
3L 28110227 3L 21831546..21832097 567..16 2745 99.8 Minus
3L 28110227 3L 21830616..21830733 1381..1264 590 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:37:09 has no hits.

BS07074.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:11 Download gff for BS07074.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1365 17..1381 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:25 Download gff for BS07074.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 109..1477 16..1386 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:43 Download gff for BS07074.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 158..1521 17..1380 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:12 Download gff for BS07074.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 109..1477 16..1386 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:43 Download gff for BS07074.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 158..1521 17..1380 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:43 Download gff for BS07074.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21830617..21830732 1265..1380 100 <- Minus
3L 21830790..21831486 568..1264 100 <- Minus
3L 21831546..21832096 17..567 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:43 Download gff for BS07074.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21823717..21823832 1265..1380 100 <- Minus
arm_3L 21823890..21824586 568..1264 100 <- Minus
arm_3L 21824646..21825196 17..567 99   Minus

BS07074.pep Sequence

Translation from 16 to 1380

> BS07074.pep
MASEPRSLILQLDDDCLAEIFDRLQDLPSEVSFARTCRRVQYICLSKWRT
SHAYEQLDLEKWRVLLPNHEDLVYFLTQMRPYIREMGGSSCLCSILKDLD
EMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRLTTPIDG
RYLSNFQHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMI
SKLQLGNCLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLVVLLDNEWH
IPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEK
LPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQLLCVRNWNDLSDEILL
EFVELCPRLEHLDVSYCRNLTPTFLPRALSILKRREPFKQKTGVGRSPPL
KLYYDLSGFEDFVDRANLKSSLEYRGYIVFTADFPVDSERGLSFVDRGYQ
FEFH*

BS07074.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 454 CG7148-PA 1..454 1..454 2419 100 Plus
CG14317-PA 448 CG14317-PA 43..374 19..362 247 25.2 Plus