Clone Sequence Records
BS07083.3prime Sequence
811 bp (810 high quality bases) assembled on 2006-01-06
> BS07083.3prime
ATGGTCTAGAAAGCTTTTACTTCGATTTTAGCTTTTTCTTTGCATTTCCA
AAATCCGTAAGCTTGCCAAGGACTCCCACAATGATCGCAACAAGTAGAAG
AGCTCCGCCCAAAAGGACTCCAATGACATCCAGGCTGTGGTAGGCGAAGA
AACCCAAATCCTGGCCAGCCACTCTCATGTGGTAGGCACCTTTGTGCCGC
AGAACGTATTCCGTCCACCAAATGGCGGTGTCCAGTGGACTCATTGGCTG
ATCACGATATCGTTCCGACATCTGCCTAGCAATCTGCGCAAATCTCGGCT
CCTTGAGCAATATCTCGATGGTCTCCTTAAGTTCCTGCTGTGTCATTGTC
GTGTGATCGAGTCCCAATCCAAAACCCGCCTGCGTGGCCCGCCTTACATT
CAGGAATTGATCGTAAAAGAAGGGCAGACCCAAGACCGGTTTGCCATGAT
GAATGCTCTCGATGGTGCTCAACAATCCGCCGTGGGTGATAAAGAGCTTG
ACCTTGGGATGGGCCAGGATATCCGGCTGAGGAAACCATTTGCTGATAAA
AACATTGGACGGTTTGCCAGGCAACTTGTCGTCCTCGAATTTCCAGAGCA
CTCGCTGCGGCAAGCTGGCGAAGGTTTTTAGGATAAGATCTTTCCTATCT
GCCGGTAGATCCTTACTGAGAACATTAGAGCCCAGTGAAAAGTATATCAC
ACCGTGCTCTCCGGAACCTTGAATAAACTCTTCCAAGTCCTTGGGCAGAG
GAGCCGGCTTGTGGGATATGTGCAGACCTCCAACCTCGATCATGTTCGGA
ACGTACGGACG
BS07083.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6649-PA | 1551 | Ugt35b-RA | 757..1551 | 811..17 | 3975 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:59:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35b-RA | 1672 | CG6649-RA | 793..1587 | 811..17 | 3975 | 100 | Minus |
CG31002-RA | 1663 | CG31002-RA | 990..1204 | 622..408 | 355 | 77.7 | Minus |
Ugt35a-RA | 1781 | CG6644-RA | 1011..1182 | 627..456 | 335 | 79.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:59:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11168588..11169382 | 17..811 | 3975 | 100 | Plus |
3R | 32079331 | 3R | 31394041..31394255 | 408..622 | 355 | 77.7 | Plus |
3R | 32079331 | 3R | 11171416..11171587 | 456..627 | 335 | 79.7 | Plus |
3R | 32079331 | 3R | 11127133..11127320 | 438..625 | 280 | 76.6 | Plus |
3R | 32079331 | 3R | 11164841..11165060 | 405..624 | 275 | 75 | Plus |
3R | 32079331 | 3R | 11177240..11177331 | 264..173 | 190 | 80.4 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:59:48 has no hits.
BS07083.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:01:34 Download gff for
BS07083.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6649-PA | 757..1551 | 17..811 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:47:43 Download gff for
BS07083.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6649-PA | 757..1551 | 17..811 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:58:54 Download gff for
BS07083.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 793..1599 | 8..811 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:59:07 Download gff for
BS07083.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 793..1599 | 8..811 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:59:07 Download gff for
BS07083.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11168576..11169382 | 8..811 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:58:54 Download gff for
BS07083.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6994298..6995104 | 8..811 | 99 | | Plus |
BS07083.5prime Sequence
933 bp (820 high quality bases) assembled on 2006-01-06
> BS07083.5prime
GAAGTTATCAGTCGACATGCTCGCTCTACGGATAGGTTTTTTGTTACTAA
CTCTGCCAGCTTCTATGCAAGCTGCCAGGATATTGGCTATATTTCCGTTT
CCGGGGCCATCACAGTATATTAATGTGGTACCTTATTTAAAGGAACTGGC
TAATCGGGGTCACCAGGTGACCTCGGTTAATGCGTTTCCGCAAAAGAAAC
CAGTGGTTAACTTCAGAGATGTGTTTATCCCAGATGTATTTAACAATTAT
AAGGAATTGATAAACGAACTGAGCGGACCAATGAATTTGTGGCAAGAGAA
CAACTTCATCAATAAATTCTTTGTAAGCGTTACACGCTGTGTTCTTACCA
ACAAAGAGGTTACAGAAACCCTTTTGCCACCGGGAAAGGATCATTTCGAT
CTTATAATTGTAGAGGCTCTACGCTCGGATGCCTACTATGGATTCGCGGC
CCACTTCAATGCACCTATAATTGGCATATCCACCTTTGGAACTGATTGGA
ATATTGATGCGCTAGTGGGCAATGAATCTCCTCTATCGTATACTCCGCTA
GCAACGGGGGGTCTTACGGATCGAATGACTTTCTTGGAGCGTCTGTCCAA
CTTTGTGGATACTACGGTTGCCTGGCTTAACTACAGATTTGTTCATATGT
CAGAGCAGGAGAAAATGTATGCGAAATACTTTCCCGAGGCCTCGAAAAGG
GTTCAACTCACCGATTTGAATAGAAACTTCTCGCTAGTATTGCTGAATCA
GCACTTTTCGTTGAGCTTCCCGCGTCCGTACGTTCCGAACATGATCGAGG
TTGGAGGTCTGCACATATCCCACAAGCCGGCTCCTCTGCCCAAGGACTTG
GAAGAGTTTATTCAAGGTTCGGGAGAGCACGGTGTGATATACTTTTCACT
GGGCTCTAATGTTCTCAGTAAAGATCTACGGGC
BS07083.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6649-PA | 1551 | Ugt35b-RA | 1..913 | 17..929 | 4515 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:06:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35b-RA | 1672 | CG6649-RA | 37..953 | 17..933 | 4540 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:06:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11169222..11169914 | 933..241 | 3360 | 99 | Minus |
3R | 32079331 | 3R | 11169973..11170210 | 254..17 | 1190 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:06:26 has no hits.
BS07083.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:01:35 Download gff for
BS07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6649-PA | 1..917 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:47:44 Download gff for
BS07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6649-PA | 1..917 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:40:40 Download gff for
BS07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 34..953 | 14..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:35:49 Download gff for
BS07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 34..953 | 14..933 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:35:49 Download gff for
BS07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11169222..11169900 | 255..933 | 99 | <- | Minus |
3R | 11169973..11170213 | 14..254 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:40:40 Download gff for
BS07083.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6994944..6995622 | 255..933 | 99 | <- | Minus |
arm_3R | 6995695..6995935 | 14..254 | 99 | | Minus |
BS07083.complete Sequence
1583 bp (1583 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635722
> BS07083.complete
GAAGTTATCAGTCGACATGCTCGCTCTACGGATAGGTTTTTTGTTACTAA
CTCTGCCAGCTTCTATGCAAGCTGCCAGGATATTGGCTATATTTCCGTTT
CCGGGGCCATCACAGTATATTAATGTGGTACCTTATTTAAAGGAACTGGC
TAATCGGGGTCACCAGGTGACCTCGGTTAATGCGTTTCCGCAAAAGAAAC
CAGTGGTTAACTTCAGAGATGTGTTTATCCCAGATGTATTTAACAATTAT
AAGGAATTGATAAACGAACTGAGCGGACCAATGAATTTGTGGCAAGAGAA
CAACTTCATCAATAAATTCTTTGTAAGCGTTACACGCTGTGTTCTTACCA
ACAAAGAGGTTACAGAAACCCTTTTGCCACCGGGAAAGGATCATTTCGAT
CTTATAATTGTAGAGGCTCTACGCTCGGATGCCTACTATGGATTCGCGGC
CCACTTCAATGCACCTATAATTGGCATATCCACCTTTGGAACTGATTGGA
ATATTGATGCGCTAGTGGGCAATGAATCTCCTCTATCGTATACTCCGCTA
GCAACGGGGGGTCTTACGGATCGAATGACTTTCTTGGAGCGTCTGTCCAA
CTTTGTGGATACTACGGTTGCCTGGCTTAACTACAGATTTGTTCATATGT
CAGAGCAGGAGAAAATGTATGCGAAATACTTTCCCGAGGCCTCGAAAAGG
GTTCAACTCACCGATTTGAATAGAAACTTCTCGCTAGTATTGCTGAATCA
GCACTTTTCGTTGAGCTTCCCGCGTCCGTACGTTCCGAACATGATCGAGG
TTGGAGGTCTGCACATATCCCACAAGCCGGCTCCTCTGCCCAAGGACTTG
GAAGAGTTTATTCAAGGTTCCGGAGAGCACGGTGTGATATACTTTTCACT
GGGCTCTAATGTTCTCAGTAAGGATCTACCGGCAGATAGGAAAGATCTTA
TCCTAAAAACCTTCGCCAGCTTGCCGCAGCGAGTGCTCTGGAAATTCGAG
GACGACAAGTTGCCTGGCAAACCGTCCAATGTTTTTATCAGCAAATGGTT
TCCTCAGCCGGATATCCTGGCCCATCCCAAGGTCAAGCTCTTTATCACCC
ACGGCGGATTGTTGAGCACCATCGAGAGCATTCATCATGGCAAACCGGTC
TTGGGTCTGCCCTTCTTTTACGATCAATTCCTGAATGTAAGGCGGGCCAC
GCAGGCGGGTTTTGGATTGGGACTCGATCACACGACAATGACACAGCAGG
AACTTAAGGAGACCATCGAGATATTGCTCAAGGAGCCGAGATTTGCGCAG
ATTGCTAGGCAGATGTCGGAACGATATCGTGATCAGCCAATGAGTCCACT
GGACACCGCCATTTGGTGGACGGAATACGTTCTGCGGCACAAAGGTGCCT
ACCACATGAGAGTGGCTGGCCAGGATTTGGGTTTCTTCGCCTACCACAGC
CTGGATGTCATTGGAGTCCTTTTGGGCGGAGCTCTTCTACTTGTTGCGAT
CATTGTGGGAGTCCTTGGCAAGCTTACGGATTTTGGAAATGCAAAGAAAA
AGCTAAAATCGAAGTAAAAGCTTTCTAGACCAT
BS07083.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:34:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35b-RA | 1551 | CG6649-PA | 1..1551 | 17..1567 | 7755 | 100 | Plus |
CG31002-RA | 1566 | CG31002-PA | 940..1154 | 962..1176 | 355 | 77.7 | Plus |
Ugt35a-RA | 1614 | CG6644-PA | 971..1142 | 957..1128 | 335 | 79.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:34:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35b-RA | 1672 | CG6649-RA | 37..1587 | 17..1567 | 7755 | 100 | Plus |
CG31002-RA | 1663 | CG31002-RA | 990..1204 | 962..1176 | 355 | 77.7 | Plus |
Ugt35a-RA | 1781 | CG6644-RA | 1011..1182 | 957..1128 | 335 | 79.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:34:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11168588..11169914 | 1567..241 | 6575 | 99.7 | Minus |
3R | 32079331 | 3R | 11169973..11170210 | 254..17 | 1190 | 100 | Minus |
3R | 32079331 | 3R | 31394041..31394255 | 1176..962 | 355 | 77.7 | Minus |
3R | 32079331 | 3R | 11171416..11171587 | 1128..957 | 335 | 79.7 | Minus |
3R | 32079331 | 3R | 11127133..11127527 | 1146..749 | 320 | 72.6 | Minus |
3R | 32079331 | 3R | 11164841..11165060 | 1179..960 | 275 | 75 | Minus |
3R | 32079331 | 3R | 11177240..11177331 | 1320..1411 | 190 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:34:43 has no hits.
BS07083.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:13 Download gff for
BS07083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 1..1551 | 17..1567 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:27 Download gff for
BS07083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 21..1586 | 14..1576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:01 Download gff for
BS07083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 37..1585 | 17..1565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:13 Download gff for
BS07083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 21..1586 | 14..1576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:04 Download gff for
BS07083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35b-RA | 37..1585 | 17..1565 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:04 Download gff for
BS07083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11168590..11169900 | 255..1565 | 100 | <- | Minus |
3R | 11169973..11170210 | 17..254 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:01 Download gff for
BS07083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6994312..6995622 | 255..1565 | 100 | <- | Minus |
arm_3R | 6995695..6995932 | 17..254 | 100 | | Minus |
BS07083.pep Sequence
Translation from 16 to 1566
> BS07083.pep
MLALRIGFLLLTLPASMQAARILAIFPFPGPSQYINVVPYLKELANRGHQ
VTSVNAFPQKKPVVNFRDVFIPDVFNNYKELINELSGPMNLWQENNFINK
FFVSVTRCVLTNKEVTETLLPPGKDHFDLIIVEALRSDAYYGFAAHFNAP
IIGISTFGTDWNIDALVGNESPLSYTPLATGGLTDRMTFLERLSNFVDTT
VAWLNYRFVHMSEQEKMYAKYFPEASKRVQLTDLNRNFSLVLLNQHFSLS
FPRPYVPNMIEVGGLHISHKPAPLPKDLEEFIQGSGEHGVIYFSLGSNVL
SKDLPADRKDLILKTFASLPQRVLWKFEDDKLPGKPSNVFISKWFPQPDI
LAHPKVKLFITHGGLLSTIESIHHGKPVLGLPFFYDQFLNVRRATQAGFG
LGLDHTTMTQQELKETIEILLKEPRFAQIARQMSERYRDQPMSPLDTAIW
WTEYVLRHKGAYHMRVAGQDLGFFAYHSLDVIGVLLGGALLLVAIIVGVL
GKLTDFGNAKKKLKSK*
BS07083.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35b-PA | 516 | CG6649-PA | 1..516 | 1..516 | 2700 | 100 | Plus |
CG31002-PA | 521 | CG31002-PA | 4..498 | 6..500 | 1451 | 53.7 | Plus |
Ugt86De-PA | 527 | CG6653-PA | 5..502 | 1..497 | 1431 | 53.2 | Plus |
Ugt86Dg-PB | 527 | CG17200-PB | 1..498 | 1..500 | 1401 | 52.1 | Plus |
Ugt86Dd-PB | 517 | CG6633-PB | 18..507 | 14..512 | 1334 | 53.3 | Plus |