Clone BS07083 Report

Search the DGRC for BS07083

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:70
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptUgt35b-RA
Protein status:BS07083.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07083.3prime Sequence

811 bp (810 high quality bases) assembled on 2006-01-06

> BS07083.3prime
ATGGTCTAGAAAGCTTTTACTTCGATTTTAGCTTTTTCTTTGCATTTCCA
AAATCCGTAAGCTTGCCAAGGACTCCCACAATGATCGCAACAAGTAGAAG
AGCTCCGCCCAAAAGGACTCCAATGACATCCAGGCTGTGGTAGGCGAAGA
AACCCAAATCCTGGCCAGCCACTCTCATGTGGTAGGCACCTTTGTGCCGC
AGAACGTATTCCGTCCACCAAATGGCGGTGTCCAGTGGACTCATTGGCTG
ATCACGATATCGTTCCGACATCTGCCTAGCAATCTGCGCAAATCTCGGCT
CCTTGAGCAATATCTCGATGGTCTCCTTAAGTTCCTGCTGTGTCATTGTC
GTGTGATCGAGTCCCAATCCAAAACCCGCCTGCGTGGCCCGCCTTACATT
CAGGAATTGATCGTAAAAGAAGGGCAGACCCAAGACCGGTTTGCCATGAT
GAATGCTCTCGATGGTGCTCAACAATCCGCCGTGGGTGATAAAGAGCTTG
ACCTTGGGATGGGCCAGGATATCCGGCTGAGGAAACCATTTGCTGATAAA
AACATTGGACGGTTTGCCAGGCAACTTGTCGTCCTCGAATTTCCAGAGCA
CTCGCTGCGGCAAGCTGGCGAAGGTTTTTAGGATAAGATCTTTCCTATCT
GCCGGTAGATCCTTACTGAGAACATTAGAGCCCAGTGAAAAGTATATCAC
ACCGTGCTCTCCGGAACCTTGAATAAACTCTTCCAAGTCCTTGGGCAGAG
GAGCCGGCTTGTGGGATATGTGCAGACCTCCAACCTCGATCATGTTCGGA
ACGTACGGACG

BS07083.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG6649-PA 1551 Ugt35b-RA 757..1551 811..17 3975 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35b-RA 1672 CG6649-RA 793..1587 811..17 3975 100 Minus
CG31002-RA 1663 CG31002-RA 990..1204 622..408 355 77.7 Minus
Ugt35a-RA 1781 CG6644-RA 1011..1182 627..456 335 79.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11168588..11169382 17..811 3975 100 Plus
3R 32079331 3R 31394041..31394255 408..622 355 77.7 Plus
3R 32079331 3R 11171416..11171587 456..627 335 79.7 Plus
3R 32079331 3R 11127133..11127320 438..625 280 76.6 Plus
3R 32079331 3R 11164841..11165060 405..624 275 75 Plus
3R 32079331 3R 11177240..11177331 264..173 190 80.4 Minus
Blast to na_te.dros performed on 2015-02-12 03:59:48 has no hits.

BS07083.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:01:34 Download gff for BS07083.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6649-PA 757..1551 17..811 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:47:43 Download gff for BS07083.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6649-PA 757..1551 17..811 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:58:54 Download gff for BS07083.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 793..1599 8..811 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:59:07 Download gff for BS07083.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 793..1599 8..811 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:59:07 Download gff for BS07083.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11168576..11169382 8..811 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:58:54 Download gff for BS07083.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6994298..6995104 8..811 99   Plus

BS07083.5prime Sequence

933 bp (820 high quality bases) assembled on 2006-01-06

> BS07083.5prime
GAAGTTATCAGTCGACATGCTCGCTCTACGGATAGGTTTTTTGTTACTAA
CTCTGCCAGCTTCTATGCAAGCTGCCAGGATATTGGCTATATTTCCGTTT
CCGGGGCCATCACAGTATATTAATGTGGTACCTTATTTAAAGGAACTGGC
TAATCGGGGTCACCAGGTGACCTCGGTTAATGCGTTTCCGCAAAAGAAAC
CAGTGGTTAACTTCAGAGATGTGTTTATCCCAGATGTATTTAACAATTAT
AAGGAATTGATAAACGAACTGAGCGGACCAATGAATTTGTGGCAAGAGAA
CAACTTCATCAATAAATTCTTTGTAAGCGTTACACGCTGTGTTCTTACCA
ACAAAGAGGTTACAGAAACCCTTTTGCCACCGGGAAAGGATCATTTCGAT
CTTATAATTGTAGAGGCTCTACGCTCGGATGCCTACTATGGATTCGCGGC
CCACTTCAATGCACCTATAATTGGCATATCCACCTTTGGAACTGATTGGA
ATATTGATGCGCTAGTGGGCAATGAATCTCCTCTATCGTATACTCCGCTA
GCAACGGGGGGTCTTACGGATCGAATGACTTTCTTGGAGCGTCTGTCCAA
CTTTGTGGATACTACGGTTGCCTGGCTTAACTACAGATTTGTTCATATGT
CAGAGCAGGAGAAAATGTATGCGAAATACTTTCCCGAGGCCTCGAAAAGG
GTTCAACTCACCGATTTGAATAGAAACTTCTCGCTAGTATTGCTGAATCA
GCACTTTTCGTTGAGCTTCCCGCGTCCGTACGTTCCGAACATGATCGAGG
TTGGAGGTCTGCACATATCCCACAAGCCGGCTCCTCTGCCCAAGGACTTG
GAAGAGTTTATTCAAGGTTCGGGAGAGCACGGTGTGATATACTTTTCACT
GGGCTCTAATGTTCTCAGTAAAGATCTACGGGC

BS07083.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:39:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG6649-PA 1551 Ugt35b-RA 1..913 17..929 4515 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35b-RA 1672 CG6649-RA 37..953 17..933 4540 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11169222..11169914 933..241 3360 99 Minus
3R 32079331 3R 11169973..11170210 254..17 1190 100 Minus
Blast to na_te.dros performed on 2015-02-12 19:06:26 has no hits.

BS07083.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:01:35 Download gff for BS07083.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6649-PA 1..917 17..933 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:47:44 Download gff for BS07083.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6649-PA 1..917 17..933 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:40:40 Download gff for BS07083.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 34..953 14..933 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:35:49 Download gff for BS07083.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 34..953 14..933 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:35:49 Download gff for BS07083.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11169222..11169900 255..933 99 <- Minus
3R 11169973..11170213 14..254 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:40:40 Download gff for BS07083.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6994944..6995622 255..933 99 <- Minus
arm_3R 6995695..6995935 14..254 99   Minus

BS07083.complete Sequence

1583 bp (1583 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635722

> BS07083.complete
GAAGTTATCAGTCGACATGCTCGCTCTACGGATAGGTTTTTTGTTACTAA
CTCTGCCAGCTTCTATGCAAGCTGCCAGGATATTGGCTATATTTCCGTTT
CCGGGGCCATCACAGTATATTAATGTGGTACCTTATTTAAAGGAACTGGC
TAATCGGGGTCACCAGGTGACCTCGGTTAATGCGTTTCCGCAAAAGAAAC
CAGTGGTTAACTTCAGAGATGTGTTTATCCCAGATGTATTTAACAATTAT
AAGGAATTGATAAACGAACTGAGCGGACCAATGAATTTGTGGCAAGAGAA
CAACTTCATCAATAAATTCTTTGTAAGCGTTACACGCTGTGTTCTTACCA
ACAAAGAGGTTACAGAAACCCTTTTGCCACCGGGAAAGGATCATTTCGAT
CTTATAATTGTAGAGGCTCTACGCTCGGATGCCTACTATGGATTCGCGGC
CCACTTCAATGCACCTATAATTGGCATATCCACCTTTGGAACTGATTGGA
ATATTGATGCGCTAGTGGGCAATGAATCTCCTCTATCGTATACTCCGCTA
GCAACGGGGGGTCTTACGGATCGAATGACTTTCTTGGAGCGTCTGTCCAA
CTTTGTGGATACTACGGTTGCCTGGCTTAACTACAGATTTGTTCATATGT
CAGAGCAGGAGAAAATGTATGCGAAATACTTTCCCGAGGCCTCGAAAAGG
GTTCAACTCACCGATTTGAATAGAAACTTCTCGCTAGTATTGCTGAATCA
GCACTTTTCGTTGAGCTTCCCGCGTCCGTACGTTCCGAACATGATCGAGG
TTGGAGGTCTGCACATATCCCACAAGCCGGCTCCTCTGCCCAAGGACTTG
GAAGAGTTTATTCAAGGTTCCGGAGAGCACGGTGTGATATACTTTTCACT
GGGCTCTAATGTTCTCAGTAAGGATCTACCGGCAGATAGGAAAGATCTTA
TCCTAAAAACCTTCGCCAGCTTGCCGCAGCGAGTGCTCTGGAAATTCGAG
GACGACAAGTTGCCTGGCAAACCGTCCAATGTTTTTATCAGCAAATGGTT
TCCTCAGCCGGATATCCTGGCCCATCCCAAGGTCAAGCTCTTTATCACCC
ACGGCGGATTGTTGAGCACCATCGAGAGCATTCATCATGGCAAACCGGTC
TTGGGTCTGCCCTTCTTTTACGATCAATTCCTGAATGTAAGGCGGGCCAC
GCAGGCGGGTTTTGGATTGGGACTCGATCACACGACAATGACACAGCAGG
AACTTAAGGAGACCATCGAGATATTGCTCAAGGAGCCGAGATTTGCGCAG
ATTGCTAGGCAGATGTCGGAACGATATCGTGATCAGCCAATGAGTCCACT
GGACACCGCCATTTGGTGGACGGAATACGTTCTGCGGCACAAAGGTGCCT
ACCACATGAGAGTGGCTGGCCAGGATTTGGGTTTCTTCGCCTACCACAGC
CTGGATGTCATTGGAGTCCTTTTGGGCGGAGCTCTTCTACTTGTTGCGAT
CATTGTGGGAGTCCTTGGCAAGCTTACGGATTTTGGAAATGCAAAGAAAA
AGCTAAAATCGAAGTAAAAGCTTTCTAGACCAT

BS07083.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35b-RA 1551 CG6649-PA 1..1551 17..1567 7755 100 Plus
CG31002-RA 1566 CG31002-PA 940..1154 962..1176 355 77.7 Plus
Ugt35a-RA 1614 CG6644-PA 971..1142 957..1128 335 79.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35b-RA 1672 CG6649-RA 37..1587 17..1567 7755 100 Plus
CG31002-RA 1663 CG31002-RA 990..1204 962..1176 355 77.7 Plus
Ugt35a-RA 1781 CG6644-RA 1011..1182 957..1128 335 79.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11168588..11169914 1567..241 6575 99.7 Minus
3R 32079331 3R 11169973..11170210 254..17 1190 100 Minus
3R 32079331 3R 31394041..31394255 1176..962 355 77.7 Minus
3R 32079331 3R 11171416..11171587 1128..957 335 79.7 Minus
3R 32079331 3R 11127133..11127527 1146..749 320 72.6 Minus
3R 32079331 3R 11164841..11165060 1179..960 275 75 Minus
3R 32079331 3R 11177240..11177331 1320..1411 190 80.4 Plus
Blast to na_te.dros performed on 2014-11-27 13:34:43 has no hits.

BS07083.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:13 Download gff for BS07083.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 1..1551 17..1567 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:27 Download gff for BS07083.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 21..1586 14..1576 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:01 Download gff for BS07083.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 37..1585 17..1565 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:13 Download gff for BS07083.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 21..1586 14..1576 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:04 Download gff for BS07083.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35b-RA 37..1585 17..1565 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:04 Download gff for BS07083.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11168590..11169900 255..1565 100 <- Minus
3R 11169973..11170210 17..254 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:01 Download gff for BS07083.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6994312..6995622 255..1565 100 <- Minus
arm_3R 6995695..6995932 17..254 100   Minus

BS07083.pep Sequence

Translation from 16 to 1566

> BS07083.pep
MLALRIGFLLLTLPASMQAARILAIFPFPGPSQYINVVPYLKELANRGHQ
VTSVNAFPQKKPVVNFRDVFIPDVFNNYKELINELSGPMNLWQENNFINK
FFVSVTRCVLTNKEVTETLLPPGKDHFDLIIVEALRSDAYYGFAAHFNAP
IIGISTFGTDWNIDALVGNESPLSYTPLATGGLTDRMTFLERLSNFVDTT
VAWLNYRFVHMSEQEKMYAKYFPEASKRVQLTDLNRNFSLVLLNQHFSLS
FPRPYVPNMIEVGGLHISHKPAPLPKDLEEFIQGSGEHGVIYFSLGSNVL
SKDLPADRKDLILKTFASLPQRVLWKFEDDKLPGKPSNVFISKWFPQPDI
LAHPKVKLFITHGGLLSTIESIHHGKPVLGLPFFYDQFLNVRRATQAGFG
LGLDHTTMTQQELKETIEILLKEPRFAQIARQMSERYRDQPMSPLDTAIW
WTEYVLRHKGAYHMRVAGQDLGFFAYHSLDVIGVLLGGALLLVAIIVGVL
GKLTDFGNAKKKLKSK*

BS07083.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35b-PA 516 CG6649-PA 1..516 1..516 2700 100 Plus
CG31002-PA 521 CG31002-PA 4..498 6..500 1451 53.7 Plus
Ugt86De-PA 527 CG6653-PA 5..502 1..497 1431 53.2 Plus
Ugt86Dg-PB 527 CG17200-PB 1..498 1..500 1401 52.1 Plus
Ugt86Dd-PB 517 CG6633-PB 18..507 14..512 1334 53.3 Plus