Clone Sequence Records
BS07103.3prime Sequence
537 bp (536 high quality bases) assembled on 2006-01-06
> BS07103.3prime
ATGGTCTAGAAAGCTTCTATAAGACCTTCTTCATGTATTTCTTTTTGGCA
TTTTGCAAGCTGGGCAGCTCACAGTGGCGCGGCCCATACATTGTAATGGG
AGCGCAGTACTCGTAGCCAATGCGTTCGTAGAATCCATCCTGGTCGATGG
TGGACAGATATATGGTCTTGAGGTCCAGCACGACGCGGCAATAGTCCTCG
GCGAACTTCATGATCAGCTTGCCGAATCCCTGGCCACGGTGCCGCTTGTC
CACCACCACGGACTCGACGAAGCAGGCCTTCTTCTTGGAATTGATCGGGC
TGAGCTTGAGGTGAGCGATCACGCGGCACATTCCCTCGGTGGTCAGCACC
AGGCTGCAGGGTAGGCTGTCACAGGAGGCCTCCAGGGAGCGCATGCGCGC
CGTTTCCGATCGTGGCCACTCTGCGTTGATTAGGGCGCAAGTGTCTTTCA
TAAGCTCCGGGTAGTTGTGAATGGGAACCACATTGAACGGGCTGCCGCTG
ACATTGAATGGAGGAAGCCCCATGTCGACTGATAACT
BS07103.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-PA | 507 | CG8481-RA | 1..507 | 523..17 | 2535 | 100 | Minus |
| CG8481-PB | 537 | CG8481-RB | 34..537 | 520..17 | 2520 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RA | 1412 | CG8481-RA | 305..812 | 523..16 | 2540 | 100 | Minus |
| CG8481-RB | 1506 | CG8481-RB | 402..906 | 520..16 | 2525 | 100 | Minus |
| MED6-RB | 1758 | CG9473-RB | 1..63 | 459..521 | 315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 14:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9768922..9769427 | 521..16 | 2530 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 14:15:36 has no hits.
BS07103.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:08 Download gff for
BS07103.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-PA | 1..507 | 17..523 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:27 Download gff for
BS07103.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-PA | 1..507 | 17..523 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 03:03:47 Download gff for
BS07103.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 298..812 | 16..532 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:05:16 Download gff for
BS07103.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 298..812 | 16..532 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:05:16 Download gff for
BS07103.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9768911..9769427 | 16..534 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 03:03:47 Download gff for
BS07103.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5594633..5595149 | 16..534 | 99 | | Minus |
BS07103.5prime Sequence
537 bp (536 high quality bases) assembled on 2006-01-06
> BS07103.5prime
GAAGTTATCAGTCGACATGGGGCTTCCTCCATTCAATGTCAGCGGCAGCC
CGTTCAATGTGGTTCCCATTCACAACTACCCGGAGCTTATGAAAGACACT
TGCGCCCTAATCAACGCAGAGTGGCCACGATCGGAAACGGCGCGCATGCG
CTCCCTGGAGGCCTCCTGTGACAGCCTACCCTGCAGCCTGGTGCTGACCA
CCGAGGGAATGTGCCGCGTGATCGCTCACCTCAAGCTCAGCCCGATCAAT
TCCAAGAAGAAGGCCTGCTTCGTCGAGTCCGTGGTGGTGGACAAGCGGCA
CCGTGGCCAGGGATTCGGCAAGCTGATCATGAAGTTCGCCGAGGACTATT
GCCGCGTCGTGCTGGACCTCAAGACCATATATCTGTCCACCATCGACCAG
GATGGATTCTACGAACGCATTGGCTACGAGTACTGCGCTCCCATTACAAT
GTATGGGCCGCGCCACTGTGAGCTGCCCAGCTTGCAAAATGCCAAAAAGA
AATACATGAAGAAGGTCTTATAGAAGCTTTCTAGACC
BS07103.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-PA | 507 | CG8481-RA | 1..507 | 17..523 | 2535 | 100 | Plus |
| CG8481-PB | 537 | CG8481-RB | 34..537 | 20..523 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 21:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RA | 1412 | CG8481-RA | 305..812 | 17..524 | 2540 | 100 | Plus |
| CG8481-RB | 1506 | CG8481-RB | 402..906 | 20..524 | 2525 | 100 | Plus |
| MED6-RB | 1758 | CG9473-RB | 1..63 | 81..19 | 315 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 21:43:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9768922..9769427 | 19..524 | 2530 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 21:43:45 has no hits.
BS07103.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:09 Download gff for
BS07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-PA | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:28 Download gff for
BS07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-PA | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 20:27:42 Download gff for
BS07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 298..812 | 8..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:39:59 Download gff for
BS07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 298..812 | 8..524 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:39:59 Download gff for
BS07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9768911..9769427 | 6..524 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 20:27:42 Download gff for
BS07103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5594633..5595149 | 6..524 | 99 | | Plus |
BS07103.complete Sequence
539 bp (539 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635728
> BS07103.complete
GAAGTTATCAGTCGACATGGGGCTTCCTCCATTCAATGTCAGCGGCAGCC
CGTTCAATGTGGTTCCCATTCACAACTACCCGGAGCTTATGAAAGACACT
TGCGCCCTAATCAACGCAGAGTGGCCACGATCGGAAACGGCGCGCATGCG
CTCCCTGGAGGCCTCCTGTGACAGCCTACCCTGCAGCCTGGTGCTGACCA
CCGAGGGAATGTGCCGCGTGATCGCTCACCTCAAGCTCAGCCCGATCAAT
TCCAAGAAGAAGGCCTGCTTCGTCGAGTCCGTGGTGGTGGACAAGCGGCA
CCGTGGCCAGGGATTCGGCAAGCTGATCATGAAGTTCGCCGAGGACTATT
GCCGCGTCGTGCTGGACCTCAAGACCATATATCTGTCCACCATCGACCAG
GATGGATTCTACGAACGCATTGGCTACGAGTACTGCGCTCCCATTACAAT
GTATGGGCCGCGCCACTGTGAGCTGCCCAGCTTGCAAAATGCCAAAAAGA
AATACATGAAGAAGGTCTTATAGAAGCTTTCTAGACCAT
BS07103.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:32:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RA | 507 | CG8481-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
| CG8481-RB | 537 | CG8481-PB | 34..537 | 20..523 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:33:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RA | 1412 | CG8481-RA | 305..812 | 17..524 | 2540 | 100 | Plus |
| CG8481-RB | 1506 | CG8481-RB | 402..906 | 20..524 | 2525 | 100 | Plus |
| MED6-RB | 1758 | CG9473-RB | 1..63 | 81..19 | 315 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9768922..9769427 | 19..524 | 2530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:32:58 has no hits.
BS07103.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:23 Download gff for
BS07103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:29:04 Download gff for
BS07103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 281..795 | 8..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:08 Download gff for
BS07103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 305..811 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:23 Download gff for
BS07103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 281..795 | 8..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:06 Download gff for
BS07103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 305..811 | 17..523 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:06 Download gff for
BS07103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9768921..9769426 | 17..523 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:08 Download gff for
BS07103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5594643..5595148 | 17..523 | 99 | | Plus |
BS07103.pep Sequence
Translation from 16 to 522
> BS07103.pep
MGLPPFNVSGSPFNVVPIHNYPELMKDTCALINAEWPRSETARMRSLEAS
CDSLPCSLVLTTEGMCRVIAHLKLSPINSKKKACFVESVVVDKRHRGQGF
GKLIMKFAEDYCRVVLDLKTIYLSTIDQDGFYERIGYEYCAPITMYGPRH
CELPSLQNAKKKYMKKVL*
BS07103.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:49:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-PA | 168 | CG8481-PA | 1..168 | 1..168 | 898 | 100 | Plus |
| CG8481-PB | 178 | CG8481-PB | 12..178 | 2..168 | 893 | 100 | Plus |
