Clone Sequence Records
BS07107.3prime Sequence
910 bp (808 high quality bases) assembled on 2006-01-06
> BS07107.3prime
ATGGTCTAGAAAGCTTCTACAGCTCGTTGCGCTGCGTTTTGGAGGGATTT
TCTGATGCCCGTCGGGGGAATTCCTTGTGGGAAAGAATTTCCTCGGCTGC
TCCATCGACAAGATGCACAAATTCCTTCACATCAAAGCTATAATTGGTAA
ACTTGGCGTGTGCGCCGCCCTCGGGATGATGACCCTCGTCCTGTGGGTAC
ACCAAGTCCCGCTGCTCCCAAGTGCGGTAGCGAACGCCACGTAGGCGAGC
CAAGTCCTTGTAGCAATTCGGATCCTCGCAGTTGTACAGCTCAAAAATGC
AGGCCCAGTTGGGCAGGAAGAGCAAGTGCGTCAGGCCAGCGCCATGCATG
CCGATGAGTATGTCCGTGTTCCGTGTGATGGCCAACTGGTTGGTAAAGGG
GAGCCTTTCATAGGAAACACGCTGTACATCGTACTTATCGTTGGCCTCCA
GGGGGGCCAGCAGCTCGTCTTCATTCAGCACTTGCCGGTACTTTGTGCGA
CGCGATAGATATGTTATTCTGATCTTTTGCTGTGGCGGCTTGTAGGGAAT
CTGCAGGCGGTGCAGAATGAACTCGGAGAAGGCGCGGAAGAGTCCACTAT
TCGAGCAGCCTTGGATTATGGGTGTATTGTAGAATAAGCCAAAGATCATC
CTGGGCAGCAGCGGCAGCACAACGTTCTTGAAGCATACCCGCTTGCCCTC
CACATCGCTGAGTGTCCATACTGGTCGTTGCGAGAAGGCCTTAAATGTGT
CCCTGAAGGGCGAATCGTACGGATAGGTCTCCCATATAAGTATCTGCACA
TCCGTGTTGAAGGCCGCCGGATGCGACTGGTTGACAAAGAGCGAGGCATA
CAGGTTGAAGAAGTCGCAGAAATGATGATACATGTTGTACGTGGCATCGA
TTTTCATGAT
BS07107.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9867-PA | 1563 | CG9867-RA | 670..1563 | 910..17 | 4470 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:34:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1869 | CG9867-RA | 907..1801 | 910..16 | 4475 | 100 | Minus |
Eogt-RB | 1806 | CG9867-RB | 844..1738 | 910..16 | 4475 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:34:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2382615..2383005 | 406..16 | 1955 | 100 | Minus |
2L | 23513712 | 2L | 2382003..2382296 | 910..617 | 1470 | 100 | Minus |
2L | 23513712 | 2L | 2382349..2382561 | 616..404 | 1065 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:34:40 has no hits.
BS07107.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:18 Download gff for
BS07107.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 670..1563 | 17..910 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:38 Download gff for
BS07107.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 670..1563 | 17..910 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:45:15 Download gff for
BS07107.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 844..1738 | 16..910 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:04:14 Download gff for
BS07107.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 844..1738 | 16..910 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:04:14 Download gff for
BS07107.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2382617..2383005 | 16..404 | 100 | | Minus |
2L | 2382003..2382296 | 617..910 | 100 | -> | Minus |
2L | 2382349..2382560 | 405..616 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:45:15 Download gff for
BS07107.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2382003..2382296 | 617..910 | 100 | -> | Minus |
arm_2L | 2382349..2382560 | 405..616 | 100 | -> | Minus |
arm_2L | 2382617..2383005 | 16..404 | 100 | | Minus |
BS07107.5prime Sequence
854 bp (814 high quality bases) assembled on 2006-01-06
> BS07107.5prime
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTA
BS07107.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9867-PA | 1563 | CG9867-RA | 1..838 | 17..854 | 4190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:33:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1869 | CG9867-RA | 238..1075 | 17..854 | 4190 | 100 | Plus |
Eogt-RB | 1806 | CG9867-RB | 175..1012 | 17..854 | 4190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:33:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2381334..2382171 | 17..854 | 4190 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:33:10 has no hits.
BS07107.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:19 Download gff for
BS07107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 1..837 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:39 Download gff for
BS07107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 1..837 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:44 Download gff for
BS07107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1011 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:50:03 Download gff for
BS07107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1011 | 17..853 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:50:03 Download gff for
BS07107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2381334..2382170 | 17..853 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:44 Download gff for
BS07107.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2381334..2382170 | 17..853 | 100 | | Plus |
BS07107.complete Sequence
1595 bp (1595 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635730
> BS07107.complete
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTAAGGCCTTCTCGCAACGACCAGTATGGACACTCAGCGATGTGGAGGG
CAAGCGGGTATGCTTCAAGAACGTTGTGCTGCCGCTGCTGCCCAGGATGA
TCTTTGGCTTATTCTACAATACACCCATAATCCAAGGCTGCTCGAATAGT
GGACTCTTCCGCGCCTTCTCCGAGTTCATTCTGCACCGCCTGCAGATTCC
CTACAAGCCGCCACAGCAAAAGATCAGAATAACATATCTATCGCGTCGCA
CAAAGTACCGGCAAGTGCTGAATGAAGACGAGCTGCTGGCCCCCCTGGAG
GCCAACGATAAGTACGATGTACAGCGTGTTTCCTATGAAAGGCTCCCCTT
TACCAACCAGTTGGCCATCACACGGAACACGGACATACTCATCGGCATGC
ATGGCGCTGGCCTGACGCACTTGCTCTTCCTGCCCAACTGGGCCTGCATT
TTTGAGCTGTACAACTGCGAGGATCCGAATTGCTACAAGGACTTGGCTCG
CCTACGTGGCGTTCGCTACCGCACTTGGGAGCAGCGGGACTTGGTGTACC
CACAGGACGAGGGTCATCATCCCGAGGGCGGCGCACACGCCAAGTTTACC
AATTATAGCTTTGATGTGAAGGAATTTGTGCATCTTGTCGATGGAGCAGC
CGAGGAAATTCTTTCCCACAAGGAATTCCCCCGACGGGCATCAGAAAATC
CCTCCAAAACGCAGCGCAACGAGCTGTAGAAGCTTTCTAGACCAT
BS07107.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:12:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1563 | CG9867-PA | 1..1563 | 17..1579 | 7815 | 100 | Plus |
Eogt-RB | 1563 | CG9867-PB | 1..1563 | 17..1579 | 7815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1869 | CG9867-RA | 238..1801 | 17..1580 | 7820 | 100 | Plus |
Eogt-RB | 1806 | CG9867-RB | 175..1738 | 17..1580 | 7820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2381334..2382296 | 17..979 | 4815 | 100 | Plus |
2L | 23513712 | 2L | 2382615..2383005 | 1190..1580 | 1955 | 100 | Plus |
2L | 23513712 | 2L | 2382349..2382561 | 980..1192 | 1065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:12:55 has no hits.
BS07107.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:53 Download gff for
BS07107.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-RA | 1..1563 | 17..1579 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:49:25 Download gff for
BS07107.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-RA | 195..1758 | 17..1580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:56 Download gff for
BS07107.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1737 | 17..1579 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:54 Download gff for
BS07107.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-RA | 195..1758 | 17..1580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:21 Download gff for
BS07107.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1737 | 17..1579 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:21 Download gff for
BS07107.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2381334..2382296 | 17..979 | 100 | -> | Plus |
2L | 2382349..2382560 | 980..1191 | 100 | -> | Plus |
2L | 2382617..2383004 | 1192..1579 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:56 Download gff for
BS07107.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2381334..2382296 | 17..979 | 100 | -> | Plus |
arm_2L | 2382349..2382560 | 980..1191 | 100 | -> | Plus |
arm_2L | 2382617..2383004 | 1192..1579 | 100 | | Plus |
BS07107.pep Sequence
Translation from 16 to 1578
> BS07107.pep
MPILPILIGILHLSLAEDAKHLDGFSLPSLPSEHLIRYLNTFPKLKQQLP
TNLTGKGTISSACWGHERDCTPAGRFQTPQCPGEHTGWARSKEAQVRTFY
NQADFGYIQEQLSQLTPQCVPTYLGDSSLECTHYLRFCRGRNLLFDFRGL
EQREERIRYHMDVLGPGQLLGHCKLNRTRLSGEMEHIGSALQSWGPELRN
FDVLPHPVLESGLCDVVVNTPTFIMKIDATYNMYHHFCDFFNLYASLFVN
QSHPAAFNTDVQILIWETYPYDSPFRDTFKAFSQRPVWTLSDVEGKRVCF
KNVVLPLLPRMIFGLFYNTPIIQGCSNSGLFRAFSEFILHRLQIPYKPPQ
QKIRITYLSRRTKYRQVLNEDELLAPLEANDKYDVQRVSYERLPFTNQLA
ITRNTDILIGMHGAGLTHLLFLPNWACIFELYNCEDPNCYKDLARLRGVR
YRTWEQRDLVYPQDEGHHPEGGAHAKFTNYSFDVKEFVHLVDGAAEEILS
HKEFPRRASENPSKTQRNEL*
BS07107.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-PA | 520 | CG9867-PA | 1..520 | 1..520 | 2822 | 100 | Plus |
Eogt-PB | 520 | CG9867-PB | 1..520 | 1..520 | 2822 | 100 | Plus |