Clone BS07107 Report

Search the DGRC for BS07107

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:71
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptEogt-RA
Protein status:BS07107.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07107.3prime Sequence

910 bp (808 high quality bases) assembled on 2006-01-06

> BS07107.3prime
ATGGTCTAGAAAGCTTCTACAGCTCGTTGCGCTGCGTTTTGGAGGGATTT
TCTGATGCCCGTCGGGGGAATTCCTTGTGGGAAAGAATTTCCTCGGCTGC
TCCATCGACAAGATGCACAAATTCCTTCACATCAAAGCTATAATTGGTAA
ACTTGGCGTGTGCGCCGCCCTCGGGATGATGACCCTCGTCCTGTGGGTAC
ACCAAGTCCCGCTGCTCCCAAGTGCGGTAGCGAACGCCACGTAGGCGAGC
CAAGTCCTTGTAGCAATTCGGATCCTCGCAGTTGTACAGCTCAAAAATGC
AGGCCCAGTTGGGCAGGAAGAGCAAGTGCGTCAGGCCAGCGCCATGCATG
CCGATGAGTATGTCCGTGTTCCGTGTGATGGCCAACTGGTTGGTAAAGGG
GAGCCTTTCATAGGAAACACGCTGTACATCGTACTTATCGTTGGCCTCCA
GGGGGGCCAGCAGCTCGTCTTCATTCAGCACTTGCCGGTACTTTGTGCGA
CGCGATAGATATGTTATTCTGATCTTTTGCTGTGGCGGCTTGTAGGGAAT
CTGCAGGCGGTGCAGAATGAACTCGGAGAAGGCGCGGAAGAGTCCACTAT
TCGAGCAGCCTTGGATTATGGGTGTATTGTAGAATAAGCCAAAGATCATC
CTGGGCAGCAGCGGCAGCACAACGTTCTTGAAGCATACCCGCTTGCCCTC
CACATCGCTGAGTGTCCATACTGGTCGTTGCGAGAAGGCCTTAAATGTGT
CCCTGAAGGGCGAATCGTACGGATAGGTCTCCCATATAAGTATCTGCACA
TCCGTGTTGAAGGCCGCCGGATGCGACTGGTTGACAAAGAGCGAGGCATA
CAGGTTGAAGAAGTCGCAGAAATGATGATACATGTTGTACGTGGCATCGA
TTTTCATGAT

BS07107.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG9867-PA 1563 CG9867-RA 670..1563 910..17 4470 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1869 CG9867-RA 907..1801 910..16 4475 100 Minus
Eogt-RB 1806 CG9867-RB 844..1738 910..16 4475 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2382615..2383005 406..16 1955 100 Minus
2L 23513712 2L 2382003..2382296 910..617 1470 100 Minus
2L 23513712 2L 2382349..2382561 616..404 1065 100 Minus
Blast to na_te.dros performed on 2015-02-12 00:34:40 has no hits.

BS07107.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:18 Download gff for BS07107.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 670..1563 17..910 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:38 Download gff for BS07107.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 670..1563 17..910 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:45:15 Download gff for BS07107.3prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 844..1738 16..910 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:04:14 Download gff for BS07107.3prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 844..1738 16..910 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:04:14 Download gff for BS07107.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 2382617..2383005 16..404 100   Minus
2L 2382003..2382296 617..910 100 -> Minus
2L 2382349..2382560 405..616 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:45:15 Download gff for BS07107.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2382003..2382296 617..910 100 -> Minus
arm_2L 2382349..2382560 405..616 100 -> Minus
arm_2L 2382617..2383005 16..404 100   Minus

BS07107.5prime Sequence

854 bp (814 high quality bases) assembled on 2006-01-06

> BS07107.5prime
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTA

BS07107.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9867-PA 1563 CG9867-RA 1..838 17..854 4190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:33:12
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1869 CG9867-RA 238..1075 17..854 4190 100 Plus
Eogt-RB 1806 CG9867-RB 175..1012 17..854 4190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:33:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2381334..2382171 17..854 4190 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:33:10 has no hits.

BS07107.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:19 Download gff for BS07107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 1..837 17..853 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:39 Download gff for BS07107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 1..837 17..853 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:34:44 Download gff for BS07107.5prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1011 17..853 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:50:03 Download gff for BS07107.5prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1011 17..853 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:50:03 Download gff for BS07107.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2381334..2382170 17..853 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:34:44 Download gff for BS07107.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2381334..2382170 17..853 100   Plus

BS07107.complete Sequence

1595 bp (1595 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635730

> BS07107.complete
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTAAGGCCTTCTCGCAACGACCAGTATGGACACTCAGCGATGTGGAGGG
CAAGCGGGTATGCTTCAAGAACGTTGTGCTGCCGCTGCTGCCCAGGATGA
TCTTTGGCTTATTCTACAATACACCCATAATCCAAGGCTGCTCGAATAGT
GGACTCTTCCGCGCCTTCTCCGAGTTCATTCTGCACCGCCTGCAGATTCC
CTACAAGCCGCCACAGCAAAAGATCAGAATAACATATCTATCGCGTCGCA
CAAAGTACCGGCAAGTGCTGAATGAAGACGAGCTGCTGGCCCCCCTGGAG
GCCAACGATAAGTACGATGTACAGCGTGTTTCCTATGAAAGGCTCCCCTT
TACCAACCAGTTGGCCATCACACGGAACACGGACATACTCATCGGCATGC
ATGGCGCTGGCCTGACGCACTTGCTCTTCCTGCCCAACTGGGCCTGCATT
TTTGAGCTGTACAACTGCGAGGATCCGAATTGCTACAAGGACTTGGCTCG
CCTACGTGGCGTTCGCTACCGCACTTGGGAGCAGCGGGACTTGGTGTACC
CACAGGACGAGGGTCATCATCCCGAGGGCGGCGCACACGCCAAGTTTACC
AATTATAGCTTTGATGTGAAGGAATTTGTGCATCTTGTCGATGGAGCAGC
CGAGGAAATTCTTTCCCACAAGGAATTCCCCCGACGGGCATCAGAAAATC
CCTCCAAAACGCAGCGCAACGAGCTGTAGAAGCTTTCTAGACCAT

BS07107.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:12:56
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1563 CG9867-PA 1..1563 17..1579 7815 100 Plus
Eogt-RB 1563 CG9867-PB 1..1563 17..1579 7815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1869 CG9867-RA 238..1801 17..1580 7820 100 Plus
Eogt-RB 1806 CG9867-RB 175..1738 17..1580 7820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2381334..2382296 17..979 4815 100 Plus
2L 23513712 2L 2382615..2383005 1190..1580 1955 100 Plus
2L 23513712 2L 2382349..2382561 980..1192 1065 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:12:55 has no hits.

BS07107.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:53 Download gff for BS07107.complete
Subject Subject Range Query Range Percent Splice Strand
CG9867-RA 1..1563 17..1579 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:49:25 Download gff for BS07107.complete
Subject Subject Range Query Range Percent Splice Strand
CG9867-RA 195..1758 17..1580 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:56 Download gff for BS07107.complete
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1737 17..1579 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:54 Download gff for BS07107.complete
Subject Subject Range Query Range Percent Splice Strand
CG9867-RA 195..1758 17..1580 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:21 Download gff for BS07107.complete
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1737 17..1579 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:21 Download gff for BS07107.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2381334..2382296 17..979 100 -> Plus
2L 2382349..2382560 980..1191 100 -> Plus
2L 2382617..2383004 1192..1579 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:56 Download gff for BS07107.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2381334..2382296 17..979 100 -> Plus
arm_2L 2382349..2382560 980..1191 100 -> Plus
arm_2L 2382617..2383004 1192..1579 100   Plus

BS07107.pep Sequence

Translation from 16 to 1578

> BS07107.pep
MPILPILIGILHLSLAEDAKHLDGFSLPSLPSEHLIRYLNTFPKLKQQLP
TNLTGKGTISSACWGHERDCTPAGRFQTPQCPGEHTGWARSKEAQVRTFY
NQADFGYIQEQLSQLTPQCVPTYLGDSSLECTHYLRFCRGRNLLFDFRGL
EQREERIRYHMDVLGPGQLLGHCKLNRTRLSGEMEHIGSALQSWGPELRN
FDVLPHPVLESGLCDVVVNTPTFIMKIDATYNMYHHFCDFFNLYASLFVN
QSHPAAFNTDVQILIWETYPYDSPFRDTFKAFSQRPVWTLSDVEGKRVCF
KNVVLPLLPRMIFGLFYNTPIIQGCSNSGLFRAFSEFILHRLQIPYKPPQ
QKIRITYLSRRTKYRQVLNEDELLAPLEANDKYDVQRVSYERLPFTNQLA
ITRNTDILIGMHGAGLTHLLFLPNWACIFELYNCEDPNCYKDLARLRGVR
YRTWEQRDLVYPQDEGHHPEGGAHAKFTNYSFDVKEFVHLVDGAAEEILS
HKEFPRRASENPSKTQRNEL*

BS07107.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:39
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-PA 520 CG9867-PA 1..520 1..520 2822 100 Plus
Eogt-PB 520 CG9867-PB 1..520 1..520 2822 100 Plus