Clone Sequence Records
BS07110.5prime Sequence
483 bp (482 high quality bases) assembled on 2006-01-06
> BS07110.5prime
GAAGTTATCAGTCGACATGTCTGCGCTGTTCCGTCTGACCAACCGCGCCG
TGGCGCTGCAGCGTTCCCTGGTCGCCAACCAGGCGGCAGTGGTGCGGGCA
ATCAACACGTCGCCGAAGAAGGATGAGACCATCACGGCCCCCACTTCACT
TACGACCGAGGACTTTGCCAATCCGAGTCCCAAGAACTGGCAGAGCTACG
GATTCGACTACAAGGACCAGGTGGAGGATCGCAAGGCCACCAAGTCGACG
TTCTTCGTTACGGTGACACTGTGCCTGGTGTGGGGCAGCTTCTACTGGGC
CTACCTGCCCGACACTCAGTTCCGCAACTGGGCCCAGCGTGAGGGCTTCT
TGGAGCTGCGTCGCCGCGAACTGGCCGGCGTGGATTTGGTCAGCCCCAAC
TACGTGGACCCCGCCAGCATTACACTGCCCTCGGACGAGGATCTGGGCGA
CACCGAGATCATCATCTAAAAGCTTTCTAGACC
BS07110.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6008-PA | 453 | NP15.6-RA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:15:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 648 | CG6008-RA | 81..534 | 17..470 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 14:15:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19027448..19027901 | 17..470 | 2270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 14:15:42 has no hits.
BS07110.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:25 Download gff for
BS07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:49 Download gff for
BS07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 03:03:50 Download gff for
BS07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 93..557 | 13..480 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:05:37 Download gff for
BS07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 77..541 | 13..480 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:05:37 Download gff for
BS07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19027444..19027908 | 13..480 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 03:03:50 Download gff for
BS07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14853166..14853630 | 13..480 | 98 | | Plus |
BS07110.3prime Sequence
483 bp (482 high quality bases) assembled on 2006-01-06
> BS07110.3prime
ATGGTCTAGAAAGCTTTTAGATGATGATCTCGGTGTCGCCCAGATCCTCG
TCCGAGGGCAGTGTAATGCTGGCGGGGTCCACGTAGTTGGGGCTGACCAA
ATCCACGCCGGCCAGTTCGCGGCGACGCAGCTCCAAGAAGCCCTCACGCT
GGGCCCAGTTGCGGAACTGAGTGTCGGGCAGGTAGGCCCAGTAGAAGCTG
CCCCACACCAGGCACAGTGTCACCGTAACGAAGAACGTCGACTTGGTGGC
CTTGCGATCCTCCACCTGGTCCTTGTAGTCGAATCCGTAGCTCTGCCAGT
TCTTGGGACTCGGATTGGCAAAGTCCTCGGTCGTAAGTGAAGTGGGGGCC
GTGATGGTCTCATCCTTCTTCGGCGACGTGTTGATTGCCCGCACCACTGC
CGCCTGGTTGGCGACCAGGGAACGCTGCAGCGCCACGGCGCGGTTGGTCA
GACGGAACAGCGCAGACATGTCGACTGATAACT
BS07110.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6008-PA | 453 | NP15.6-RA | 1..453 | 469..17 | 2265 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:19:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 648 | CG6008-RA | 81..534 | 469..16 | 2270 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 14:18:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19027448..19027901 | 469..16 | 2270 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 14:19:02 has no hits.
BS07110.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:24 Download gff for
BS07110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 17..469 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:48 Download gff for
BS07110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 17..469 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:02:01 Download gff for
BS07110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 93..557 | 6..473 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:33:41 Download gff for
BS07110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 77..541 | 6..473 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:33:41 Download gff for
BS07110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19027444..19027908 | 6..473 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:02:01 Download gff for
BS07110.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14853166..14853630 | 6..473 | 98 | | Minus |
BS07110.complete Sequence
485 bp (485 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635732
> BS07110.complete
GAAGTTATCAGTCGACATGTCTGCGCTGTTCCGTCTGACCAACCGCGCCG
TGGCGCTGCAGCGTTCCCTGGTCGCCAACCAGGCGGCAGTGGTGCGGGCA
ATCAACACGTCGCCGAAGAAGGATGAGACCATCACGGCCCCCACTTCACT
TACGACCGAGGACTTTGCCAATCCGAGTCCCAAGAACTGGCAGAGCTACG
GATTCGACTACAAGGACCAGGTGGAGGATCGCAAGGCCACCAAGTCGACG
TTCTTCGTTACGGTGACACTGTGCCTGGTGTGGGGCAGCTTCTACTGGGC
CTACCTGCCCGACACTCAGTTCCGCAACTGGGCCCAGCGTGAGGGCTTCT
TGGAGCTGCGTCGCCGCGAACTGGCCGGCGTGGATTTGGTCAGCCCCAAC
TACGTGGACCCCGCCAGCATTACACTGCCCTCGGACGAGGATCTGGGCGA
CACCGAGATCATCATCTAAAAGCTTTCTAGACCAT
BS07110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 453 | CG6008-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:26:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 648 | CG6008-RA | 81..534 | 17..470 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:26:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19027448..19027901 | 17..470 | 2270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:26:23 has no hits.
BS07110.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:49:22 Download gff for
BS07110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 1..453 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:37:41 Download gff for
BS07110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 93..557 | 13..480 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:47 Download gff for
BS07110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 97..547 | 17..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:49:22 Download gff for
BS07110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 93..557 | 13..480 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:41 Download gff for
BS07110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 81..531 | 17..467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:07:41 Download gff for
BS07110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19027448..19027898 | 17..467 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:47 Download gff for
BS07110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14853170..14853620 | 17..467 | 100 | | Plus |
BS07110.pep Sequence
Translation from 16 to 468
> BS07110.pep
MSALFRLTNRAVALQRSLVANQAAVVRAINTSPKKDETITAPTSLTTEDF
ANPSPKNWQSYGFDYKDQVEDRKATKSTFFVTVTLCLVWGSFYWAYLPDT
QFRNWAQREGFLELRRRELAGVDLVSPNYVDPASITLPSDEDLGDTEIII
*
BS07110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:34:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-PA | 150 | CG6008-PA | 1..150 | 1..150 | 779 | 100 | Plus |
