Clone BS07114 Report

Search the DGRC for BS07114

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:71
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG17294-RA
Protein status:BS07114.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07114.3prime Sequence

798 bp (797 high quality bases) assembled on 2006-01-06

> BS07114.3prime
ATGGTCTAGAAAGCTTCTAAGATTGGTTTTTCTGTATAATCCAATCGACA
GCCTCTGCAAAGTTTTCCAACAACGCTGTTGGAGGTGGGGATGGTTTGAC
ATCCGGCAGATATTTGCCGGTCTTGACCAGAATTCCCTGCATGCCCATGC
TCATGGCGCCCACTATGTCATCATTGGCATCATCTCCAATCATAACGCAT
GAGGCTGGATCCCGACCAGCCAGAGCTCCTTCGAAGAAATAAGGATTGGG
CTTGCCAATCACTTTGGCAGTTCGTCCTGTAGCGAACTCCAAACCCTTGA
CAAAGCACCCTGGGCCCAAGGCTAGGCCTTCTGCTCGTTTGTAGTACTTA
CCCTGATGCACGGCGATCAGTTTGTGATTCTTGTTTTCCAATAGAACGTT
AAAAGCCTCATTCAGCTGTTCATAGTTAAAGGCCTTGGGTGCCAGACCGA
TTACAACTGAATCCTTATAGCGCCTAGTGTCCTCCGGCGGAAAGTCCTGT
CGTGCATCCTCAGACAGAATATAGTACGGATTTAGTCTCTCATTTTCCAC
ATACGAGACTGCGGCACTCAAGGAGCTGTAGATCTCAGAGGCGTCAAGTT
GGAAGCCAATCCTGCATAGCCGTTCGTGAAGAGTGGCCTTTGAATCCTTC
GTGGTGTTTGTAACGAATTTCACCAGTACGCCAGAGTCACGCAATCTTTT
TAACGCCTCGACAGCATTCGGAGTAGGTTCATCCTCCACATGCAAGGTGC
CACTGAGATCAATGAGTGCTCCTTTAATAGACATGTCGACTGATAACT

BS07114.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG17294-PA 768 CG17294-RA 1..768 784..17 3840 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG17294-RA 1012 CG17294-RA 50..817 784..17 3840 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8377223..8377521 697..399 1495 100 Minus
2L 23513712 2L 8377577..8377794 398..181 1090 100 Minus
2L 23513712 2L 8377847..8378011 181..17 825 100 Minus
2L 23513712 2L 8377084..8377172 784..696 445 100 Minus
Blast to na_te.dros performed 2015-02-02 19:54:39
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 4019..4114 727..635 132 63.3 Minus

BS07114.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:32 Download gff for BS07114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-PA 1..768 17..784 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:58 Download gff for BS07114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-PA 1..768 17..784 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:02:23 Download gff for BS07114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 44..822 10..791 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:12:20 Download gff for BS07114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 44..822 10..791 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:12:20 Download gff for BS07114.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8377078..8377172 696..791 95 -> Minus
2L 8377225..8377521 399..695 100 -> Minus
2L 8377577..8377793 182..398 100 -> Minus
2L 8377847..8378016 10..181 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:02:23 Download gff for BS07114.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8377078..8377172 696..791 95 -> Minus
arm_2L 8377225..8377521 399..695 100 -> Minus
arm_2L 8377577..8377793 182..398 100 -> Minus
arm_2L 8377847..8378016 10..181 98   Minus

BS07114.5prime Sequence

798 bp (797 high quality bases) assembled on 2006-01-06

> BS07114.5prime
GAAGTTATCAGTCGACATGTCTATTAAAGGAGCACTCATTGATCTCAGTG
GCACCTTGCATGTGGAGGATGAACCTACTCCGAATGCTGTCGAGGCGTTA
AAAAGATTGCGTGACTCTGGCGTACTGGTGAAATTCGTTACAAACACCAC
GAAGGATTCAAAGGCCACTCTTCACGAACGGCTATGCAGGATTGGCTTCC
AACTTGACGCCTCTGAGATCTACAGCTCCTTGAGTGCCGCAGTCTCGTAT
GTGGAAAATGAGAGACTAAATCCGTACTATATTCTGTCTGAGGATGCACG
ACAGGACTTTCCGCCGGAGGACACTAGGCGCTATAAGGATTCAGTTGTAA
TCGGTCTGGCACCCAAGGCCTTTAACTATGAACAGCTGAATGAGGCTTTT
AACGTTCTATTGGAAAACAAGAATCACAAACTGATCGCCGTGCATCAGGG
TAAGTACTACAAACGAGCAGAAGGCCTAGCCTTGGGCCCAGGGTGCTTTG
TCAAGGGTTTGGAGTTCGCTACAGGACGAACTGCCAAAGTGATTGGCAAG
CCCAATCCTTATTTCTTCGAAGGAGCTCTGGCTGGTCGGGATCCAGCCTC
ATGCGTTATGATTGGAGATGATGCCAATGATGACATAGTGGGCGCCATGA
GCATGGGCATGCAGGGAATTCTGGTCAAGACCGGCAAATATCTGCCGGAT
GTCAAACCATCCCCACCTCCAACAGCGTTGTTGGAAAACTTTGCAGAGGC
TGTCGATTGGATTATACAGAAAAACCAATCTTAGAAGCTTTCTAGACC

BS07114.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:40:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG17294-PA 768 CG17294-RA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG17294-RA 1012 CG17294-RA 50..817 17..784 3840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8377223..8377521 104..402 1495 100 Plus
2L 23513712 2L 8377577..8377794 403..620 1090 100 Plus
2L 23513712 2L 8377847..8378011 620..784 825 100 Plus
2L 23513712 2L 8377084..8377172 17..105 445 100 Plus
Blast to na_te.dros performed 2015-02-12 19:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 4019..4114 74..166 132 63.3 Plus

BS07114.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:02:33 Download gff for BS07114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-PA 1..768 17..784 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:48:59 Download gff for BS07114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-PA 1..768 17..784 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:40:30 Download gff for BS07114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 44..822 10..791 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:32:04 Download gff for BS07114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 44..822 10..791 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:32:04 Download gff for BS07114.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8377078..8377172 10..105 95 -> Plus
2L 8377225..8377521 106..402 100 -> Plus
2L 8377577..8377793 403..619 100 -> Plus
2L 8377847..8378016 620..791 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:40:30 Download gff for BS07114.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8377078..8377172 10..105 95 -> Plus
arm_2L 8377225..8377521 106..402 100 -> Plus
arm_2L 8377577..8377793 403..619 100 -> Plus
arm_2L 8377847..8378016 620..791 98   Plus

BS07114.complete Sequence

800 bp (800 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635734

> BS07114.complete
GAAGTTATCAGTCGACATGTCTATTAAAGGAGCACTCATTGATCTCAGTG
GCACCTTGCATGTGGAGGATGAACCTACTCCGAATGCTGTCGAGGCGTTA
AAAAGATTGCGTGACTCTGGCGTACTGGTGAAATTCGTTACAAACACCAC
GAAGGATTCAAAGGCCACTCTTCACGAACGGCTATGCAGGATTGGCTTCC
AACTTGACGCCTCTGAGATCTACAGCTCCTTGAGTGCCGCAGTCTCGTAT
GTGGAAAATGAGAGACTAAATCCGTACTATATTCTGTCTGAGGATGCACG
ACAGGACTTTCCGCCGGAGGACACTAGGCGCTATAAGGATTCAGTTGTAA
TCGGTCTGGCACCCAAGGCCTTTAACTATGAACAGCTGAATGAGGCTTTT
AACGTTCTATTGGAAAACAAGAATCACAAACTGATCGCCGTGCATCAGGG
TAAGTACTACAAACGAGCAGAAGGCCTAGCCTTGGGCCCAGGGTGCTTTG
TCAAGGGTTTGGAGTTCGCTACAGGACGAACTGCCAAAGTGATTGGCAAG
CCCAATCCTTATTTCTTCGAAGGAGCTCTGGCTGGTCGGGATCCAGCCTC
ATGCGTTATGATTGGAGATGATGCCAATGATGACATAGTGGGCGCCATGA
GCATGGGCATGCAGGGAATTCTGGTCAAGACCGGCAAATATCTGCCGGAT
GTCAAACCATCCCCACCTCCAACAGCGTTGTTGGAAAACTTTGCAGAGGC
TGTCGATTGGATTATACAGAAAAACCAATCTTAGAAGCTTTCTAGACCAT

BS07114.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:23:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG17294-RA 768 CG17294-PA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:23:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG17294-RA 1012 CG17294-RA 50..817 17..784 3840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8377223..8377521 104..402 1495 100 Plus
2L 23513712 2L 8377577..8377794 403..620 1090 100 Plus
2L 23513712 2L 8377847..8378011 620..784 825 100 Plus
2L 23513712 2L 8377084..8377172 17..105 445 100 Plus
Blast to na_te.dros performed 2014-11-27 16:23:43
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 4019..4114 74..166 132 63.3 Plus

BS07114.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:55 Download gff for BS07114.complete
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 1..768 17..784 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:07 Download gff for BS07114.complete
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 28..806 10..791 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:59 Download gff for BS07114.complete
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 50..817 17..784 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:56 Download gff for BS07114.complete
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 28..806 10..791 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:34 Download gff for BS07114.complete
Subject Subject Range Query Range Percent Splice Strand
CG17294-RA 50..817 17..784 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:17:34 Download gff for BS07114.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8377084..8377172 17..105 100 -> Plus
2L 8377225..8377521 106..402 100 -> Plus
2L 8377577..8377793 403..619 100 -> Plus
2L 8377847..8378011 620..784 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:59 Download gff for BS07114.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8377084..8377172 17..105 100 -> Plus
arm_2L 8377225..8377521 106..402 100 -> Plus
arm_2L 8377577..8377793 403..619 100 -> Plus
arm_2L 8377847..8378011 620..784 100   Plus

BS07114.pep Sequence

Translation from 16 to 783

> BS07114.pep
MSIKGALIDLSGTLHVEDEPTPNAVEALKRLRDSGVLVKFVTNTTKDSKA
TLHERLCRIGFQLDASEIYSSLSAAVSYVENERLNPYYILSEDARQDFPP
EDTRRYKDSVVIGLAPKAFNYEQLNEAFNVLLENKNHKLIAVHQGKYYKR
AEGLALGPGCFVKGLEFATGRTAKVIGKPNPYFFEGALAGRDPASCVMIG
DDANDDIVGAMSMGMQGILVKTGKYLPDVKPSPPPTALLENFAEAVDWII
QKNQS*

BS07114.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG17294-PA 255 CG17294-PA 1..255 1..255 1318 100 Plus
CG5577-PB 315 CG5577-PB 23..292 2..230 163 27.3 Plus
CG5577-PA 315 CG5577-PA 23..292 2..230 163 27.3 Plus