Clone Sequence Records
BS07136.5prime Sequence
908 bp (778 high quality bases) assembled on 2006-01-06
> BS07136.5prime
GAAGTTATCAGTCGACATGCGAGGGAGCTGGCCCAGGCTTGGGTTCCCGG
CGCTGCTCCTGCTCCTCCATCTGCTGACCGGCTCGGATGCCGCCGTCCGG
AATGGGACTGCAAAGCGGGAAATTGGCGATTCCCGGGGAAGCAGCGGCAC
CTGCGTCAAAGGGTTCCTGCAGGAGATCCTGCCACTGCCAGCGACTTGTC
CGCCTGAGGTGCTCGGGATGAGGGGCGCCGTGTATATCCTTTACGACGTA
AACATCTCCGAGGGCTTCAACCTGCGCCGAGACGTCTATATTCGCATGGC
GGTGTTCGTGCGCCGGCTGCAGAGGAGAAGGCGCTTTCGCCATGTGCGCC
TTGTGCTGCCGCCGTGGCCCCGCCTCTACCACTGGCACTCGCAGGGCCTG
CAGCAATCTGGACTGCCCTGGAGCCACTTCTTCGACTTGGCCAGTCTGCG
TCGCTACGCGCCCGTTCTGGACTACGAGGAATTCCTGGCCGAACAGCGCT
TATTCGGCAATCCTGGCGCACCGCTGGTCCATGTAGGGCACGCTTTCCGG
TTGCAGCACTACGAGGTCATGCTAGAACAGGGCATATTTCGGGACAAGTT
CGAGCGCGTCACGGACAAGCCGTGCAGCGAGGGATCCCTGTCGGGAGGAC
CATTGCTGCAGCAGGCGGAGCTGCGCGTGGGGCGTTTCCACTGCGTTCGG
TTCCAGGGCAGCGCCGGACTGCTGGAGAAGTTGCTTCGCGAGGCGATCGA
CGAGGACACGGCGGGACCGGAGGACGTCGACGACATGCGCACGTACGCTT
TGCTCAGCGCCGAAACGGTGCTTCACGACCACTGGGGCGACGAGCACTTT
TGGCAGGCCCGGCGTTCCATGCGTTTCGCCCGTCGGCTCGAACAGGTGGC
CGCCGACT
BS07136.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14789-PA | 1473 | O-fut2-RA | 1..892 | 17..908 | 4460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:46:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1634 | CG14789-RA | 18..909 | 17..908 | 4460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:46:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1465088..1465979 | 908..17 | 4460 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 04:46:38 has no hits.
BS07136.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:03:19 Download gff for
BS07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 1..892 | 17..908 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:50:02 Download gff for
BS07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 1..892 | 17..908 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:49:45 Download gff for
BS07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..909 | 17..908 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:25:38 Download gff for
BS07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..909 | 17..908 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:25:38 Download gff for
BS07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1465088..1465979 | 17..908 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:49:45 Download gff for
BS07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1359121..1360012 | 17..908 | 100 | | Minus |
BS07136.3prime Sequence
914 bp (795 high quality bases) assembled on 2006-01-06
> BS07136.3prime
ATGGTCTAGAAAGCTTTCAGTACGGGTCGGAATCTTCCTCGCTGTCGCTA
TCGCCATCCGCCCACACAATGGGCCACACGGCGTTGCGCGAGCAGCTGCC
GCCTAAGGCCTTGCAGAACGTGTTAAAGGTGCTGGCCTGGGTAAAGCCGA
GGATCTCGCGCTCCTCGTAGATGCGGTACGTGAAGGTGCTCTCGTAGGTG
CCCACAAAGTAGCGGGCGTAGGCGCAGACCAGCTGGTCCACCACCGCCAC
GCCCCCATCCTTCAGCTCCCTTCGTTGGACATTCGACTCCGGCGCGAAGT
GCACGAGGCGGAAGCGGTAGAAGAGCTCCTTTAGTTCCATCAGCTCGTAT
GGCGTGGCGTCAGTGGCCAGGAACACTGTGGTCATGTTAAACCCGCGCAG
CAGCTGCTTGACCTGCTGGGCAGCCGCCTTCAGGGTGGGAGTGGTCGCAT
CCCGCGAGCGAACAAAGTCGCCCCGCCTTAGGTGGGCGCAGAGGTAATCG
CCGCCCTTGGCGTTGCGCTTCGGCCGCTCCAGCTCCCACATGGCGGGCCG
TTGGACACCGGCCGAAGCATCTGTGGTGTCCAGGGCCTGCCGTCGGAAGT
CGGCGGCCACCTGTTCGAGCCGACGGGCGAAACGCATGGAACGCCGGGCC
TGCCAAAAGTGCTCGTCGCCCCAGTGGTCGTGAAGCACCGTTTCGGCGCT
GAGCAAAGCGTACGTGCGCATGTCGTCGACGTCCTCCGGTCCCGCCGTGT
CCTCGTCGATCGCCTCGCGAAGCAACTTCTCCAGCAGTCCGGCGCTGCCC
TGGAACCGAACGCAGTGGAAACGCCCCACGCGCAGCTCCGCCTGCTGCAG
CAATGGTCCTCCCGACAGGGATCCCTCGCTGCACGGCTTGTCCGTGACGC
GCTCGAACTTGTCC
BS07136.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14789-PA | 1473 | O-fut2-RA | 576..1473 | 914..17 | 4490 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1634 | CG14789-RA | 593..1490 | 914..17 | 4490 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 15:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1464507..1465404 | 17..914 | 4490 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 15:13:06 has no hits.
BS07136.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:03:18 Download gff for
BS07136.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 576..1473 | 17..914 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:50:01 Download gff for
BS07136.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 576..1473 | 17..914 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 00:03:43 Download gff for
BS07136.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 593..1490 | 17..914 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:42:40 Download gff for
BS07136.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 593..1490 | 17..914 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:42:40 Download gff for
BS07136.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1464507..1465404 | 17..914 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 00:03:43 Download gff for
BS07136.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1358540..1359437 | 17..914 | 100 | | Plus |
BS07136.complete Sequence
1505 bp (1505 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635741
> BS07136.complete
GAAGTTATCAGTCGACATGCGAGGGAGCTGGCCCAGGCTTGGGTTCCCGG
CGCTGCTCCTGCTCCTCCATCTGCTGACCGGCTCGGATGCCGCCGTCCGG
AATGGGACTGCAAAGCGGGAAATTGGCGATTCCCGGGGAAGCAGCGGCAC
CTGCGTCAAAGGGTTCCTGCAGGAGATCCTGCCACTGCCAGCGACTTGTC
CGCCTGAGGTGCTCGGGATGAGGGGCGCCGTGTATATCCTTTACGACGTA
AACATCTCCGAGGGCTTCAACCTGCGCCGAGACGTCTATATTCGCATGGC
GGTGTTCGTGCGCCGGCTGCAGAGGAGAAGGCGCTTTCGCCATGTGCGCC
TTGTGCTGCCGCCGTGGCCCCGCCTCTACCACTGGCACTCGCAGGGCCTG
CAGCAATCTGGACTGCCCTGGAGCCACTTCTTCGACTTGGCCAGTCTGCG
TCGCTACGCGCCCGTTCTGGACTACGAGGAATTCCTGGCCGAACAGCGCT
TATTCGGCAATCCTGGCGCACCGCTGGTCCATGTAGGGCACGCTTTCCGG
TTGCAGCACTACGAGGTCATGCTAGAACAGGGCATATTTCGGGACAAGTT
CGAGCGCGTCACGGACAAGCCGTGCAGCGAGGGATCCCTGTCGGGAGGAC
CATTGCTGCAGCAGGCGGAGCTGCGCGTGGGGCGTTTCCACTGCGTTCGG
TTCCAGGGCAGCGCCGGACTGCTGGAGAAGTTGCTTCGCGAGGCGATCGA
CGAGGACACGGCGGGACCGGAGGACGTCGACGACATGCGCACGTACGCTT
TGCTCAGCGCCGAAACGGTGCTTCACGACCACTGGGGCGACGAGCACTTT
TGGCAGGCCCGGCGTTCCATGCGTTTCGCCCGTCGGCTCGAACAGGTGGC
CGCCGACTTCCGACGGCAGGCCCTGGACACCACAGATGCTTCGGCCGGTG
TCCAACGGCCCGCCATGTGGGAGCTGGAGCGGCCGAAGCGCAACGCCAAG
GGCGGCGATTACCTCTGCGCCCACCTAAGGCGGGGCGACTTTGTTCGCTC
GCGGGATGCGACCACTCCCACCCTGAAGGCGGCTGCCCAGCAGGTCAAGC
AGCTGCTGCGCGGGTTTAACATGACCACAGTGTTCCTGGCCACTGACGCC
ACGCCATACGAGCTGATGGAACTAAAGGAGCTCTTCTACCGCTTCCGCCT
CGTGCACTTCGCGCCGGAGTCGAATGTCCAACGAAGGGAGCTGAAGGATG
GGGGCGTGGCGGTGGTGGACCAGCTGGTCTGCGCCTACGCCCGCTACTTT
GTGGGCACCTACGAGAGCACCTTCACGTACCGCATCTACGAGGAGCGCGA
GATCCTCGGCTTTACCCAGGCCAGCACCTTTAACACGTTCTGCAAGGCCT
TAGGCGGCAGCTGCTCGCGCAACGCCGTGTGGCCCATTGTGTGGGCGGAT
GGCGATAGCGACAGCGAGGAAGATTCCGACCCGTACTGAAAGCTTTCTAG
ACCAT
BS07136.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:36:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1473 | CG14789-PA | 1..1473 | 17..1489 | 7365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1634 | CG14789-RA | 18..1490 | 17..1489 | 7365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1464507..1465979 | 1489..17 | 7365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 23:36:09 has no hits.
BS07136.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:48 Download gff for
BS07136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 1..1473 | 17..1489 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:49:19 Download gff for
BS07136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 454..1926 | 17..1489 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:33:07 Download gff for
BS07136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..1489 | 17..1488 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:48 Download gff for
BS07136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 454..1926 | 17..1489 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:04:19 Download gff for
BS07136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..1489 | 17..1488 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:04:19 Download gff for
BS07136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1464508..1465979 | 17..1488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:33:07 Download gff for
BS07136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1358541..1360012 | 17..1488 | 100 | | Minus |
BS07136.pep Sequence
Translation from 16 to 1488
> BS07136.pep
MRGSWPRLGFPALLLLLHLLTGSDAAVRNGTAKREIGDSRGSSGTCVKGF
LQEILPLPATCPPEVLGMRGAVYILYDVNISEGFNLRRDVYIRMAVFVRR
LQRRRRFRHVRLVLPPWPRLYHWHSQGLQQSGLPWSHFFDLASLRRYAPV
LDYEEFLAEQRLFGNPGAPLVHVGHAFRLQHYEVMLEQGIFRDKFERVTD
KPCSEGSLSGGPLLQQAELRVGRFHCVRFQGSAGLLEKLLREAIDEDTAG
PEDVDDMRTYALLSAETVLHDHWGDEHFWQARRSMRFARRLEQVAADFRR
QALDTTDASAGVQRPAMWELERPKRNAKGGDYLCAHLRRGDFVRSRDATT
PTLKAAAQQVKQLLRGFNMTTVFLATDATPYELMELKELFYRFRLVHFAP
ESNVQRRELKDGGVAVVDQLVCAYARYFVGTYESTFTYRIYEEREILGFT
QASTFNTFCKALGGSCSRNAVWPIVWADGDSDSEEDSDPY*
BS07136.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-PA | 490 | CG14789-PA | 1..490 | 1..490 | 2594 | 100 | Plus |
