Clone Sequence Records
BS07152.3prime Sequence
941 bp (872 high quality bases) assembled on 2006-01-06
> BS07152.3prime
ATGGTCTAGAAAGCTTCTAGCTATCGTCCTGCGGTATCCGAATTTCCTCG
CACATCCCCTCCTCCCGGTGAATGCTCGCCCAGTGCTGTGAGAGCTCCCG
GCTGATGGCCTTGCGGAACACCATGCACGATATGTGCGGCAACTTCTCGA
AGCGTACCCGTAGCAGTCCAATCCTGGCCAGGGAGTAGCGCCAGTTTTTC
ATGAGGTGGGCGTTTTTGCCAACATGTTGGGAGTCCGGTGTGATGAGCAC
AAGGATGCCCTCGGGCAGCAGCAGGTCGTAGGCCTGAAGGCAGCACTGTA
GTCTCTGCTCGGCGCTGGGCATGTATTCCAGTAGCAAACTGAAAATGACG
CACTCGTAGTGGCTTGCTGGTAGCCTTCTTACGCTGCCCTCCTCCAGCTC
AGGTTCTCGTATTCCGGGTACCACCTCCACTTTGAGGAAATCCGCCTGCA
GCACATCTTCGGTGGCGGGACACAAGTCCAGGGCGGTTACCTCCAAGTGC
GGAGCACTGGAAAAGGGATTGAAGCAGCTGCCCACATCCAGGACGTGCAG
CCTGTCCGGCGGCTCCTCCATCAGCCTGCACTGCACCTCGCCCAGTTTTC
CCTCGGCTCTGTAGGATTCCAGGAGTCGCTGCTCCCGCTGGCGCTTCTGC
AAATATATGCCCTCGGTAAAGAAGTACTTGGTGATGTAGTCGATGGCCCA
CTTGATGCGGCTGCGTGCCTGCAGCTCCACCTTCCCATCGTTGGTCTCCC
ATATGGCCGCCAGTTGCTTCATCGCCTTGGCGTACTCCGCCAGTTGCTTG
GCGTTCCTGGGACTCGTGTGCTCCTGCCAGGCCGCTGTGGCGCCATACTC
CTTAGTCAACTGGCGCANGCTTTCGTGGCAGCTCTTCACGATGCTGGGCA
GGCGCTGGTGCTCCTCCGTGGCCATGTCGACTGATAACTTC
BS07152.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-PA | 909 | CG3570-RA | 1..909 | 925..17 | 4501 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:23:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 75..988 | 929..16 | 4529 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:23:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603646..24604559 | 929..16 | 4529 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:23:24 has no hits.
BS07152.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:03:54 Download gff for
BS07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 1..909 | 17..925 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:50:46 Download gff for
BS07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 1..909 | 17..925 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:42:13 Download gff for
BS07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 73..995 | 11..932 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:14:34 Download gff for
BS07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 73..995 | 11..932 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:14:34 Download gff for
BS07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603644..24604566 | 11..932 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:42:13 Download gff for
BS07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491167..20492089 | 11..932 | 99 | | Minus |
BS07152.5prime Sequence
923 bp (779 high quality bases) assembled on 2006-01-06
> BS07152.5prime
GAAGTTATCAGTCGACATGGCCACGGAGGAGCACCAGCGCCTGGCCAGCA
TCGTGAAGAGCTGCCACGAAAGCCTGCGCCAGTTGACTAAGGAGTATGGC
GCCACAGCGGCCTGGCAGGAGCACACGAGTCCCAGGAACGCCAAGCAACT
GGCGGAGTACGCCAAGGCGATGAAGCAACTGGCGGCCATATGGGAGACCA
ACGATGGGAAGGTGGAGCTGCAGGCACGCAGCCGCATCAAGTGGGCCATC
GACTACATCACCAAGTACTTCTTTACCGAGGGCATATATTTGCAGAAGCG
CCAGCGGGAGCAGCGACTCCTGGAATCCTACAGAGCCGAGGGAAAACTGG
GCGAGGTGCAGTGCAGGCTGATGGAGGAGCCGCCGGACAGGCTGCACGTC
CTGGATGTGGGCAGCTGCTTCAATCCCTTTTCCAGTGCTCCGCACTTGGA
GGTAACCGCCCTGGACTTGTGTCCCGCCACCGAAGATGTGCTGCAGGCGG
ATTTCCTCAAAGTGGAGGTGGTACCCGGAATACGAGAACCTGAGCTGGAG
GAGGGCAGCGTAAGAAGGCTACCAGCAAGCCACTACGAGTGCGTCATTTT
CAGTTTGCTACTGGAATACATGCCCAGCGCCGAGCAGAGACTACAGTGCT
GCCTTCAGGCCTACGACCTGCTGCTGCCCGAGGGCATCCTTGTGCTCATC
ACACCGGACTCCCAACATGTTGGCAAAAACGCCCACCTCATGAAAAACTG
GCGCTACTCCCTGGCCAGGATTGGACTGCTACGGGTACGCTTCGAGAAGT
TGCCGCACATATCGTGCATGGTGTTCCGCAAGGCCATCAGCCGGGAGCTC
TCACAGCACTGGGCGAGCATTCACCGGGAGGAGGGGATGTGCGAGGAAAT
TCGGATACCGCAAGACGATAGCT
BS07152.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-PA | 909 | CG3570-RA | 1..907 | 17..923 | 4510 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 75..985 | 13..923 | 4525 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603646..24604556 | 13..923 | 4525 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:25:10 has no hits.
BS07152.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:03:55 Download gff for
BS07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 1..907 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:50:48 Download gff for
BS07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 1..907 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:04:32 Download gff for
BS07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 73..985 | 10..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:08:27 Download gff for
BS07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 73..985 | 10..923 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:08:27 Download gff for
BS07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603644..24604556 | 10..923 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:04:32 Download gff for
BS07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491167..20492079 | 10..923 | 99 | | Plus |
BS07152.complete Sequence
941 bp (941 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635746
> BS07152.complete
GAAGTTATCAGTCGACATGGCCACGGAGGAGCACCAGCGCCTGGCCAGCA
TCGTGAAGAGCTGCCACGAAAGCCTGCGCCAGTTGACTAAGGAGTATGGC
GCCACAGCGGCCTGGCAGGAGCACACGAGTCCCAGGAACGCCAAGCAACT
GGCGGAGTACGCCAAGGCGATGAAGCAACTGGCGGCCATATGGGAGACCA
ACGATGGGAAGGTGGAGCTGCAGGCACGCAGCCGCATCAAGTGGGCCATC
GACTACATCACCAAGTACTTCTTTACCGAGGGCATATATTTGCAGAAGCG
CCAGCGGGAGCAGCGACTCCTGGAATCCTACAGAGCCGAGGGAAAACTGG
GCGAGGTGCAGTGCAGGCTGATGGAGGAGCCGCCGGACAGGCTGCACGTC
CTGGATGTGGGCAGCTGCTTCAATCCCTTTTCCAGTGCTCCGCACTTGGA
GGTAACCGCCCTGGACTTGTGTCCCGCCACCGAAGATGTGCTGCAGGCGG
ATTTCCTCAAAGTGGAGGTGGTACCCGGAATACGAGAACCTGAGCTGGAG
GAGGGCAGCGTAAGAAGGCTACCAGCAAGCCACTACGAGTGCGTCATTTT
CAGTTTGCTACTGGAATACATGCCCAGCGCCGAGCAGAGACTACAGTGCT
GCCTTCAGGCCTACGACCTGCTGCTGCCCGAGGGCATCCTTGTGCTCATC
ACACCGGACTCCCAACATGTTGGCAAAAACGCCCACCTCATGAAAAACTG
GCGCTACTCCCTGGCCAGGATTGGACTGCTACGGGTACGCTTCGAGAAGT
TGCCGCACATATCGTGCATGGTGTTCCGCAAGGCCATCAGCCGGGAGCTC
TCACAGCACTGGGCGAGCATTCACCGGGAGGAGGGGATGTGCGAGGAAAT
TCGGATACCGCAGGACGATAGCTAGAAGCTTTCTAGACCAT
BS07152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:54:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 909 | CG3570-PA | 1..909 | 17..925 | 4545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:54:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 75..988 | 13..926 | 4555 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:54:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603646..24604559 | 13..926 | 4555 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:54:32 has no hits.
BS07152.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:02 Download gff for
BS07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 1..909 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:16 Download gff for
BS07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 33..955 | 10..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:43:25 Download gff for
BS07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 79..987 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:02 Download gff for
BS07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 33..955 | 10..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:33:57 Download gff for
BS07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 79..987 | 17..925 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:33:57 Download gff for
BS07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603650..24604558 | 17..925 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:43:25 Download gff for
BS07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491173..20492081 | 17..925 | 100 | | Plus |
BS07152.pep Sequence
Translation from 16 to 924
> BS07152.pep
MATEEHQRLASIVKSCHESLRQLTKEYGATAAWQEHTSPRNAKQLAEYAK
AMKQLAAIWETNDGKVELQARSRIKWAIDYITKYFFTEGIYLQKRQREQR
LLESYRAEGKLGEVQCRLMEEPPDRLHVLDVGSCFNPFSSAPHLEVTALD
LCPATEDVLQADFLKVEVVPGIREPELEEGSVRRLPASHYECVIFSLLLE
YMPSAEQRLQCCLQAYDLLLPEGILVLITPDSQHVGKNAHLMKNWRYSLA
RIGLLRVRFEKLPHISCMVFRKAISRELSQHWASIHREEGMCEEIRIPQD
DS*
BS07152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:22:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-PA | 302 | CG3570-PA | 1..302 | 1..302 | 1580 | 100 | Plus |
