Clone BS07156 Report

Search the DGRC for BS07156

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:71
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG6330-RA
Protein status:BS07156.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07156.3prime Sequence

961 bp (909 high quality bases) assembled on 2006-01-06

> BS07156.3prime
ATGGTCTAGAAAGCTTTTACTCGTGGGCCTGAGACTCCTGCTGGACGAGC
TTGAAGCGCCGGGGTGACTTGATGGATCCCTGGTGTCCGAATAGCGCCTT
CAGCTGTCCATTGTGCGTAAGGACCTTGCGAATATAGCGCGACACGAGGA
TCTGCGGACGCGCTTGCCACTCGTTCATGACCTCCTTGGGCGCGTTGACC
TGATCCCCATTGAGGCGGTTCAGCAGGGCGACACACACCACCGCTGCCTT
GATGCCGGCATGGTGGGTCAGGGCCGCAAAGATGGTGCTCTCCATCTCGA
TGTTGACCACGCCGTTCTCGCGCAGCTTCTCCAGATAGGCCATCTTCTCG
TTCTCGCTGAAATCACAGAATGCGCCGTCCAAACGACCCTGGCCCTCGTA
GAAATCGTTGGTGCACAGCGTCTTGCCAATAATGGTATCGTACGGATCAT
CGGGACTGGCCAGGGACTTTAGCTCACGGGCCAGCTTTTTGTCCAGCTTG
GCAGGACGATGGATGGTCTTGCCGAGAATGGTAAACTCATGGGAGTTCCT
CAGCTGCCCATCGAGGGCATCTTCGGTGATGATGACGGTGCCGCCGTCGA
CGCCAATTCCTCCGCACGTTCCTATCCTGATGAAGACGGGATCCTTGCAC
TTGGCGTGGTACATCAGCTTGATCATCTCATGCATCAGGATGCTGACCGA
GGGCGTACCCATGCCATGGCTGACGCACAGCACCGGTCCCACTTTGTACA
TGGAGTAGCGATACGAATAGGCGCTGATGTCCTGCAGCTGGGTGCCCGCT
GGCAACTTGTAGCCAATCTCGTTCATTATGAAATGGGCAAAATTCTCCAT
GCGCTTTGGTGTGCCGCCCATGCAAACGAACTTAACGTCGCCAAACATCT
CCTGCAGGTCGTGGCTCTCGCTGCCCAAGGCCAGGTGATAGAGGATATCC
TGGTCCATGAG

BS07156.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6330-PB 1044 CG6330-RB 100..1044 961..17 4725 100 Minus
CG6330-PA 1107 CG6330-RA 163..1107 961..17 4725 100 Minus
CG3788-PA 1137 CG3788-RA 472..518 673..627 185 95.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG6330-RA 1541 CG6330-RA 295..1240 961..16 4730 100 Minus
CG6330-RB 2075 CG6330-RB 398..1343 961..16 4730 100 Minus
CG3788-RB 1758 CG3788-RB 928..1104 755..579 345 79.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26950638..26951009 161..532 1860 100 Plus
3R 32079331 3R 26951072..26951428 533..889 1755 99.4 Plus
3R 32079331 3R 26950424..26950569 16..161 730 100 Plus
3R 32079331 3R 26951775..26951855 881..961 405 100 Plus
2R 25286936 2R 22932746..22932922 579..755 345 79.7 Plus
Blast to na_te.dros performed 2015-02-12 00:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 200..283 877..959 111 60.7 Plus
Tabor 7345 Tabor TABOR 7345bp 7039..7122 877..959 111 60.7 Plus

BS07156.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:04:01 Download gff for BS07156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-PB 100..1044 17..961 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:50:55 Download gff for BS07156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-PA 163..1107 17..961 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:46:36 Download gff for BS07156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-RB 398..1350 9..961 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:15:18 Download gff for BS07156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-RB 398..1350 9..961 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:15:18 Download gff for BS07156.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 26950417..26950568 9..160 97 <- Plus
3R 26950638..26951009 161..532 100 <- Plus
3R 26951072..26951419 533..880 100 <- Plus
3R 26951775..26951855 881..961 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:46:36 Download gff for BS07156.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22776139..22776290 9..160 97 <- Plus
arm_3R 22776360..22776731 161..532 100 <- Plus
arm_3R 22776794..22777141 533..880 100 <- Plus
arm_3R 22777497..22777577 881..961 100   Plus

BS07156.5prime Sequence

949 bp (743 high quality bases) assembled on 2006-01-06

> BS07156.5prime
GAAGTTATCAGTCGACATGCCGCCCACCATAACCGATAATCAGACGCACG
ACTTTAAGGCCCACTACGATTGCGCCCACAGGTCCTCGCTGCAGGACGAC
GAGACGGACGATGCGTACGTGAAAAGGATAACGCGGTACTCCGATGGAAC
CGTCAAATTGCGCAACTCGAACATTGAGCTCATGGACCAGGATATCCTCT
ATCACCTGGCCTTGGGCAGCGAGAGCCACGACCTGCAGGAGATGTTTGGC
GACGTTAAGTTCGTTTGCATGGGCGGCACACCAAAGCGCATGGAGAATTT
TGCCCATTTCATAATGAACGAGATTGGCTACAAGTTGCCAGCGGGCACCC
AGCTGCAGGACATCAGCGCCTATTCGTATCGCTACTCCATGTACAAAGTG
GGACCGGTGCTGTGCGTCAGCCATGGCATGGGTACGCCCTCGGTCAGCAT
CCTGATGCATGAGATGATCAAGCTGATGTACCACGCCAAGTGCAAGGATC
CCGTCTTCGTCAGGATAGGAACGTGCGGAGGAATTGGCGTCGACGGCGGC
ACCGTCATCATCACCGAAGATGCCCTCGATGGGCAGCTGAGGAACTCCCA
TGAGTTTACCATTCTCGGCAAGACCATCCATCGTCCTGCCAAGCTGGACA
AAAAGCTGGCCCGTGAGCTAAAGTCCCTGGCCAGTCCCGATGATCCGTAC
GATACCATTATTGGCAAGACGCTGTGCACCAACGATTTCTACGAGGGCCA
GGGTCGTTTGGACGGCGCATTCTGTGATTTCAGCGAGAACGAGAAGATGG
CCTATCTGGAGAAGCTGCGCGAGAACGGCGTGGTCAACATCGAGATGGAG
AGCACCATCTTTGCGGCCCTGACCCACCATGCCGGCATCANGGCAGCGGT
GGTGTGTGTCGCCCTGCTGAACCGCCTCAATGGGGATCAGGTCAACGCG

BS07156.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6330-PA 1107 CG6330-RA 1..933 17..949 4621 99.7 Plus
CG6330-PB 1044 CG6330-RB 57..870 136..949 4026 99.7 Plus
CG3788-PA 1137 CG3788-RA 472..513 467..508 160 95.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:18:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG6330-RA 1541 CG6330-RA 132..1065 16..949 4644 99.8 Plus
CG6330-RB 2075 CG6330-RB 355..1168 136..949 4044 99.8 Plus
CG3788-RB 1758 CG3788-RB 928..1104 385..561 330 79.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:18:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26951072..26951428 607..251 1740 99.2 Minus
3R 32079331 3R 26950668..26951009 949..608 1699 99.7 Minus
3R 32079331 3R 26951775..26951899 259..135 625 100 Minus
3R 32079331 3R 26953001..26953123 138..16 615 100 Minus
2R 25286936 2R 22932746..22932922 561..385 330 79.1 Minus
Blast to na_te.dros performed 2015-02-13 08:18:39
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 200..283 263..181 111 60.7 Minus
Tabor 7345 Tabor TABOR 7345bp 7039..7122 263..181 111 60.7 Minus

BS07156.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:04:02 Download gff for BS07156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-PA 1..933 17..949 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:50:56 Download gff for BS07156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-PA 1..933 17..949 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:58:33 Download gff for BS07156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-RA 132..1065 16..949 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:25:12 Download gff for BS07156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6330-RA 132..1065 16..949 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:25:12 Download gff for BS07156.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26950668..26951009 608..949 99 <- Minus
3R 26951072..26951419 260..607 99 <- Minus
3R 26951775..26951898 136..259 100 <- Minus
3R 26953004..26953123 16..135 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:58:33 Download gff for BS07156.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22776390..22776731 608..949 99 <- Minus
arm_3R 22776794..22777141 260..607 99 <- Minus
arm_3R 22777497..22777620 136..259 100 <- Minus
arm_3R 22778726..22778845 16..135 100   Minus

BS07156.complete Sequence

1139 bp (1139 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ638799

> BS07156.complete
GAAGTTATCAGTCGACATGCCGCCCACCATAACCGATAATCAGACGCACG
ACTTTAAGGCCCACTACGATTGCGCCCACAGGTCCTCGCTGCAGGACGAC
GAGACGGACGATGCGTACGTGAAAAGGATAACGCGGTACTCCGATGGAAC
CGTCAAATTGCGCAACTCGAACATTGAGCTCATGGACCAGGATATCCTCT
ATCACCTGGCCTTGGGCAGCGAGAGCCACGACCTGCAGGAGATGTTTGGC
GACGTTAAGTTCGTTTGCATGGGCGGCACACCAAAGCGCATGGAGAATTT
TGCCCATTTCATAATGAACGAGATTGGCTACAAGTTGCCAGCGGGCACCC
AGCTGCAGGACATCAGCGCCTATTCGTATCGCTACTCCATGTACAAAGTG
GGACCGGTGCTGTGCGTCAGCCATGGCATGGGTACGCCCTCGGTCAGCAT
CCTGATGCATGAGATGATCAAGCTGATGTACCACGCCAAGTGCAAGGATC
CCGTCTTCATCAGGATAGGAACGTGCGGAGGAATTGGCGTCGACGGCGGC
ACCGTCATCATCACCGAAGATGCCCTCGATGGGCAGCTGAGGAACTCCCA
TGAGTTTACCATTCTCGGCAAGACCATCCATCGTCCTGCCAAGCTGGACA
AAAAGCTGGCCCGTGAGCTAAAGTCCCTGGCCAGTCCCGATGATCCGTAC
GATACCATTATTGGCAAGACGCTGTGCACCAACGATTTCTACGAGGGCCA
GGGTCGTTTGGACGGCGCATTCTGTGATTTCAGCGAGAACGAGAAGATGG
CCTATCTGGAGAAGCTGCGCGAGAACGGCGTGGTCAACATCGAGATGGAG
AGCACCATCTTTGCGGCCCTGACCCACCATGCCGGCATCAAGGCAGCGGT
GGTGTGTGTCGCCCTGCTGAACCGCCTCAATGGGGATCAGGTCAACGCGC
CCAAGGAGGTCATGAACGAGTGGCAAGCGCGTCCGCAGATCCTCGTGTCG
CGCTATATTCGCAAGGTCCTTACGCACAATGGACAGCTGAAGGCGCTATT
CGGACACCAGGGATCCATCAAGTCACCCCGGCGCTTCAAGCTCGTCCAGC
AGGAGTCTCAGGCCCACGAGTAAAAGCTTTCTAGACCAT

BS07156.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG6330-RA 1107 CG6330-PA 1..1107 17..1123 5535 100 Plus
CG6330-RB 1044 CG6330-PB 57..1044 136..1123 4940 100 Plus
CG3788-RB 1137 CG3788-PB 390..566 385..561 345 79.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG6330-RA 1541 CG6330-RA 132..1240 16..1124 5545 100 Plus
CG6330-RB 2075 CG6330-RB 355..1343 136..1124 4945 100 Plus
CG3788-RB 1758 CG3788-RB 928..1104 385..561 345 79.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26950638..26951009 979..608 1860 100 Minus
3R 32079331 3R 26951072..26951428 607..251 1755 99.4 Minus
3R 32079331 3R 26950424..26950569 1124..979 730 100 Minus
3R 32079331 3R 26951775..26951899 259..135 625 100 Minus
3R 32079331 3R 26953001..26953123 138..16 615 100 Minus
2R 25286936 2R 22932746..22932922 561..385 345 79.7 Minus
Blast to na_te.dros performed 2014-11-26 15:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 200..283 263..181 111 60.7 Minus
Tabor 7345 Tabor TABOR 7345bp 7039..7122 263..181 111 60.7 Minus

BS07156.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:36 Download gff for BS07156.complete
Subject Subject Range Query Range Percent Splice Strand
CG6330-RA 1..1107 17..1123 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:49:04 Download gff for BS07156.complete
Subject Subject Range Query Range Percent Splice Strand
CG6330-RA 130..1245 16..1131 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:34 Download gff for BS07156.complete
Subject Subject Range Query Range Percent Splice Strand
CG6330-RA 133..1237 17..1121 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:36 Download gff for BS07156.complete
Subject Subject Range Query Range Percent Splice Strand
CG6330-RA 130..1245 16..1131 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:16 Download gff for BS07156.complete
Subject Subject Range Query Range Percent Splice Strand
CG6330-RA 133..1237 17..1121 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:16 Download gff for BS07156.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26950638..26951009 608..979 100 <- Minus
3R 26950427..26950568 980..1121 100 <- Minus
3R 26951072..26951419 260..607 100 <- Minus
3R 26951775..26951898 136..259 100 <- Minus
3R 26953004..26953122 17..135 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:34 Download gff for BS07156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22776149..22776290 980..1121 100 <- Minus
arm_3R 22776360..22776731 608..979 100 <- Minus
arm_3R 22776794..22777141 260..607 100 <- Minus
arm_3R 22777497..22777620 136..259 100 <- Minus
arm_3R 22778726..22778844 17..135 100   Minus

BS07156.pep Sequence

Translation from 16 to 1122

> BS07156.pep
MPPTITDNQTHDFKAHYDCAHRSSLQDDETDDAYVKRITRYSDGTVKLRN
SNIELMDQDILYHLALGSESHDLQEMFGDVKFVCMGGTPKRMENFAHFIM
NEIGYKLPAGTQLQDISAYSYRYSMYKVGPVLCVSHGMGTPSVSILMHEM
IKLMYHAKCKDPVFIRIGTCGGIGVDGGTVIITEDALDGQLRNSHEFTIL
GKTIHRPAKLDKKLARELKSLASPDDPYDTIIGKTLCTNDFYEGQGRLDG
AFCDFSENEKMAYLEKLRENGVVNIEMESTIFAALTHHAGIKAAVVCVAL
LNRLNGDQVNAPKEVMNEWQARPQILVSRYIRKVLTHNGQLKALFGHQGS
IKSPRRFKLVQQESQAHE*

BS07156.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG6330-PA 368 CG6330-PA 1..368 1..368 1939 100 Plus
CG6330-PB 347 CG6330-PB 10..347 23..368 1724 96 Plus
CG3788-PB 378 CG3788-PB 57..346 50..338 928 59 Plus
CG3788-PA 378 CG3788-PA 57..346 50..338 928 59 Plus
CG17224-PD 300 CG17224-PD 2..298 42..335 693 45.2 Plus