Clone Sequence Records
BS07175.3prime Sequence
902 bp (838 high quality bases) assembled on 2006-01-06
> BS07175.3prime
ATGGTCTAGAAAGCTTTTAGTTTGTTTTGACGGCTGCTCTCAGCTTGGCG
GATCGACTGCGTGTGTTCCTCGCCACCTCGTCGGCGTCTGGCACAATGAC
ATGGCGATGTAGTTGTTTCCAGCTCTTCTTGGTCAGTGATTCTAGTATAT
CTGGCTCGTCTATTGCATAATGGCTGGAGTACTTGAGGGGAAGAGCATTG
GCGGCGCCTGCCAGGACGTTTCCGTTGATGTGACGCTTCACGATAGTGTC
CTCCAGCGAGTGGAAGGTAATGGTCACCAAGCGTCCATCCACACGGAGGA
TTTCGTTGGCCAAAACCATACCGTAGTTGATCTCGTTTAGTTCGTTGTTC
ACAAATATGCGGATGGCTTGGAAGGTCTTGGTGGCTGAGTGTGCCGGTCG
TCGAAGCTTATCCTTCCTGGTCCCGCCATCCATGATGTTTTCAATTATAT
CTGCCAGCTGCTTGGTGGTCTCGATTTTAAAGAGGGCGTTGCGCGCGTCT
ACCAGTCCTCTGGCTATCTTCTTGGCTGCTTTCTCTTCACCATACATCCT
TAAAATCTTCACAAGGTCGCCCTCTTCAACATTAGCCAACACATCGGCAG
CTGTAACCCCTCCGCTGTGGCCACCATCCATTCGCATGTCCAGTGGACCG
TCCCTCGAGATGGAGAAGCCTCTGACCGCCTCATCGAATTGCATGGAACT
GCAACCAAAATCAAAAAGCATCCCGTCCACCGAGTTCTTGGCCAGGCCAT
GTTCTTTGAAAAGCTTTGGTAAATCGGAGAATTTTCCAAGCAGGGGAATC
AGCCTACCCTTGAACTCTTCGGATTCGCTCATATCGCGGGCCAGTTGGTG
GGCCAATGGATCTCGATCTAGGGCGTATACCTTTGCCTCGGGACACTTCT
CC
BS07175.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-PA | 1071 | CG14683-RA | 186..1071 | 902..17 | 4430 | 100 | Minus |
| CG14683-PB | 1071 | CG14683-RB | 186..1071 | 902..17 | 4430 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 590..1476 | 902..16 | 4435 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:58:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10698059..10698945 | 902..16 | 4435 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:58:49 has no hits.
BS07175.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:04:40 Download gff for
BS07175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PA | 186..1071 | 17..902 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:51:47 Download gff for
BS07175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PB | 186..1071 | 17..902 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:08:48 Download gff for
BS07175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 590..1479 | 13..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:20:26 Download gff for
BS07175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 590..1479 | 13..902 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:20:26 Download gff for
BS07175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10698059..10698948 | 13..902 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:08:48 Download gff for
BS07175.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523781..6524670 | 13..902 | 99 | | Minus |
BS07175.5prime Sequence
951 bp (763 high quality bases) assembled on 2006-01-06
> BS07175.5prime
GAAGTTATCAGTCGACATGAAGCGACTCCTAAACCCTACTAGACTGAGAC
TGGATTGGTTGAGACGAAGCTCTATAGATGTGACGACTGCTCCCCATGTT
CCTGTGCTCTGCGACACCGCCATTGAATACCTGCAGCCCGTTCCAGGAGG
CACCTACTTCGACATGACTTTCGGAGCTGGTGGCCACACGCGGCGTCTTC
TGGAGAAGTGTCCCGAGGCAAAGGTATACGCCCTAGATCGAGATCCATTG
GCCCACCAACTGGCCCGCGATATGAGCGAATCCGAAGAGTTCAAGGGTAG
GCTGATTCCCCTGCTTGGAAAATTCTCCGATTTACCAAAGCTTTTCAAAG
AACATGGCCTGGCCAAGAACTCGGTGGACGGGATGCTTTTTGATTTTGGT
TGCAGTTCCATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAG
GGACGGTCCACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTA
CAGCTGCCGATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATT
TTAAGGATGTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACT
GGTAGACGCGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGG
CAGATATAATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAGCTT
CGACGACCGGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATT
TGTGAACAACGAACTAAACGAGATCAACTACGGTATGGTTTTGGCCAACG
AAATCCTCCGTGTGGATGGACGCTTGGTGACCATTACCTTCCACTCGCTG
GAGGACACTATCGTGAAGCGTCACATCAACGGAAACGTCCTGGCAGGCGC
CGCCAATGCTCTTCCCCTCAAGTACTCCAGCCATTATGCAATAGACGAGC
C
BS07175.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-PA | 1071 | CG14683-RA | 1..935 | 17..951 | 4675 | 100 | Plus |
| CG14683-PB | 1071 | CG14683-RB | 1..935 | 17..951 | 4675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:27:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 405..1339 | 17..951 | 4675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10697874..10698808 | 17..951 | 4675 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:27:57 has no hits.
BS07175.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:04:42 Download gff for
BS07175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PA | 1..935 | 17..951 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:51:49 Download gff for
BS07175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PB | 1..935 | 17..951 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:05:06 Download gff for
BS07175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 396..1339 | 10..951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:15 Download gff for
BS07175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 396..1339 | 10..951 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:15 Download gff for
BS07175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10697865..10698808 | 10..951 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:05:06 Download gff for
BS07175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523587..6524530 | 10..951 | 99 | | Plus |
BS07175.complete Sequence
1103 bp (1103 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635753
> BS07175.complete
GAAGTTATCAGTCGACATGAAGCGACTCCTAAACCCTACTAGACTGAGAC
TGGATTGGTTGAGACGAAGCTCTATAGATGTGACGACTGCTCCCCATGTT
CCTGTGCTCTGCGACACCGCCATTGAATACCTGCAGCCCGTTCCAGGAGG
CACCTACTTCGACATGACTTTCGGAGCTGGTGGCCACACGCGGCGTCTTC
TGGAGAAGTGTCCCGAGGCAAAGGTATACGCCCTAGATCGAGATCCATTG
GCCCACCAACTGGCCCGCGATATGAGCGAATCCGAAGAGTTCAAGGGTAG
GCTGATTCCCCTGCTTGGAAAATTCTCCGATTTACCAAAGCTTTTCAAAG
AACATGGCCTGGCCAAGAACTCGGTGGACGGGATGCTTTTTGATTTTGGT
TGCAGTTCCATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAG
GGACGGTCCACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTA
CAGCTGCCGATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATT
TTAAGGATGTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACT
GGTAGACGCGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGG
CAGATATAATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAGCTT
CGACGACCGGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATT
TGTGAACAACGAACTAAACGAGATCAACTACGGTATGGTTTTGGCCAACG
AAATCCTCCGTGTGGATGGACGCTTGGTGACCATTACCTTCCACTCGCTG
GAGGACACTATCGTGAAGCGTCACATCAACGGAAACGTCCTGGCAGGCGC
CGCCAATGCTCTTCCCCTCAAGTACTCCAGCCATTATGCAATAGACGAGC
CAGATATACTAGAATCACTGACCAAGAAGAGCTGGAAACAACTACATCGC
CATGTCATTGTGCCAGACGCCGACGAGGTGGCGAGGAACACACGCAGTCG
ATCCGCCAAGCTGAGAGCAGCCGTCAAAACAAACTAAAAGCTTTCTAGAC
CAT
BS07175.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1071 | CG14683-PA | 1..1071 | 17..1087 | 5355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 405..1476 | 17..1088 | 5360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:55:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10697874..10698945 | 17..1088 | 5360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:55:18 has no hits.
BS07175.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:24 Download gff for
BS07175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 1..1071 | 17..1087 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:48:52 Download gff for
BS07175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 393..1476 | 10..1091 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:01 Download gff for
BS07175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 405..1473 | 17..1085 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:24 Download gff for
BS07175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 393..1476 | 10..1091 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:34:20 Download gff for
BS07175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 405..1473 | 17..1085 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:34:20 Download gff for
BS07175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10697874..10698942 | 17..1085 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:01 Download gff for
BS07175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523596..6524664 | 17..1085 | 100 | | Plus |
BS07175.pep Sequence
Translation from 16 to 1086
> BS07175.pep
MKRLLNPTRLRLDWLRRSSIDVTTAPHVPVLCDTAIEYLQPVPGGTYFDM
TFGAGGHTRRLLEKCPEAKVYALDRDPLAHQLARDMSESEEFKGRLIPLL
GKFSDLPKLFKEHGLAKNSVDGMLFDFGCSSMQFDEAVRGFSISRDGPLD
MRMDGGHSGGVTAADVLANVEEGDLVKILRMYGEEKAAKKIARGLVDARN
ALFKIETTKQLADIIENIMDGGTRKDKLRRPAHSATKTFQAIRIFVNNEL
NEINYGMVLANEILRVDGRLVTITFHSLEDTIVKRHINGNVLAGAANALP
LKYSSHYAIDEPDILESLTKKSWKQLHRHVIVPDADEVARNTRSRSAKLR
AAVKTN*
BS07175.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-PA | 356 | CG14683-PA | 1..356 | 1..356 | 1826 | 100 | Plus |
