Clone Sequence Records
BS07191.3prime Sequence
883 bp (834 high quality bases) assembled on 2006-01-06
> BS07191.3prime
ATGGTCTAGAAAGCTTCTACGTCGCCTGACCCTGGGTGGACTGGCCAGCC
AGGCCAGAGGATATCGATGGTGTCGTACTGGTGGATGCGACTGCCGGCCC
TCCGGATGCGGCAGTGCTCTGCTCCAGACTCCACGGATGCACCATATCGT
AGTACCTGCGATAGTCGTAGTCAAAGAGCTCGAAATCGATGCGATATATC
TTGAGCAATTGGTCCAACGTTGAGCGGTCGAGATCGGCGAAGTATCGCTC
GACCAGGGCCTCGGATTTAACGCCACTTCGCGCCTGGTTGCCAATTTTGC
GCTGCTTCCGCTGCGGCAGCTTGCCCAGTCCCAGGAGCAGCGATTCCAGG
CCCGCCTGCCGTATGATGAACTCCGAGTCCCTCTGGAACGTCTCCGTCTT
GCCGATGATGGTGAAGTTAACGCTGCAGGGCGTGCAGAAGCTGTAAACTG
GTGCCCAGTGCTCGTCGAATCTCTTGCCCGCCGCATGCTCGGCGATCAGG
AAGCGGACGAACTCCTCGAAGGTGGGTCCACATCGCGGCCAGGGTCCGCC
CAGATTACGCTTCCTGTAGCGATGCACGATCTTGTTGCCCAGCGCCTTGT
AGAAGGTGTTCTTGTTGCCCTCCAGTTTGTTGCGATAGGCGCTCAGGATT
CGCTCGAAGGGATCGCGCACAAAGAGAAAGGACAGCGCACTGGGCAGCAG
CTCCATCAGTTCGCCCAGTTCCGGGCGTGGAAAACGCTTTCTGGCCAGCT
CCAGTGGCTGCGTCTCCGTGCGCTGCAGATACTTCACATCGTAGCCAGCT
AATATATTAAAGTAATACATCCACGTACTGCTGGCCGCCCTTGAGACGTT
GCACCAGACGAGATTTGTGTGGCCAGGCGAGAC
BS07191.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:42:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-PA | 1335 | CG14024-RA | 513..1335 | 839..17 | 4115 | 100 | Minus |
CG14024-PA | 1335 | CG14024-RA | 469..508 | 883..844 | 150 | 95 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:26:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 2616 | CG14024-RB | 751..1617 | 883..17 | 4260 | 99.5 | Minus |
CG14024-RA | 1798 | CG14024-RA | 751..1617 | 883..17 | 4260 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:26:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5312310..5313093 | 17..800 | 3920 | 100 | Plus |
2L | 23513712 | 2L | 5313269..5313325 | 799..855 | 240 | 94.7 | Plus |
Blast to na_te.dros performed on 2015-02-02 19:26:26 has no hits.
BS07191.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:05:16 Download gff for
BS07191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 469..1335 | 17..883 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:52:33 Download gff for
BS07191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 469..1335 | 17..883 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:01:24 Download gff for
BS07191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 745..1615 | 13..883 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:08:49 Download gff for
BS07191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 751..1621 | 13..883 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:08:49 Download gff for
BS07191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5312306..5313091 | 13..798 | 99 | <- | Plus |
2L | 5313269..5313324 | 799..854 | 96 | <- | Plus |
2L | 5313388..5313416 | 855..883 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:01:24 Download gff for
BS07191.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5312306..5313091 | 13..798 | 99 | <- | Plus |
arm_2L | 5313269..5313324 | 799..854 | 96 | <- | Plus |
arm_2L | 5313388..5313416 | 855..883 | 93 | | Plus |
BS07191.5prime Sequence
838 bp (837 high quality bases) assembled on 2006-01-06
> BS07191.5prime
GAAGTTATCAGTCGACATGCTCATCCGCCTGCGCTATGGAAGACGCCTGC
AGACCTATCTGAAGATAGGCGCCTGTGTCCTGGTCGGCCTGTGCTACTTC
GCCTTCCTTTTCCGCGAATCCCTCAATGCATACGAGCACCGGGAGCGGGC
TACGGCCGCGGAATTGGAGGCGGAATCGGAGCCATCAAAGCAGCAGCTCA
AGCTAAAGCGGCAGCAGTTGCAGCGCCAGCGGATATTGGCCAAGCAGCAG
GAGCAGGGAAAGGGCATCGCTGGGGGAAATGCCAGTGCAGGCAGCTCATC
CTCCCAAGCAGCAGCTCCTCCGCCGCCGCCGCCGGCTACCACCCTGAATC
CCGTGTATGAGTACTCCGAGGAGCTGCACAGTCGCACGGAGCGGGAGCTG
CAGAGGAGGAGCGAGCATCTGGCCGCCGTCTGCGATCGGTATAAGCTGCA
GGAAAAGTACCCACCGAATCCCTGGGAGTTCTTCGTCTCGCCTGGCCACA
ACAATCTCGTCTGGTGCAACGTCTTCAAGGCGGCCAGCAGTACGTGGATG
TATTACTTTAATATATTAGCTGGCTACGATGTGAAGTATCTGCAGCGCAC
GGAGACGCAGCCACTGGAGCTGGCCAGAAAGCGTTTTCCACGCCCGGAAC
TGGGCGAACTGATGGAGCTGCTGCCCAGTGCGCTGTCCTTTCTCTTTGTG
CGCGATCCCTTCGAGCGAATCCTGAGCGCCTATCGCAACAAACTGGAGGG
CAACAAGAACACCTTCTACAAGGCGCTGGGCAACAAGATCGTGCATCGCT
ACAGGAAGCGTAATCTGGGCGGACCCTGGCCGCGATGT
BS07191.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:42:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-PA | 1335 | CG14024-RA | 1..822 | 17..838 | 4110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:13:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 2616 | CG14024-RB | 283..1104 | 17..838 | 4110 | 100 | Plus |
CG14024-RA | 1798 | CG14024-RA | 283..1104 | 17..838 | 4110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:12:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5313386..5313884 | 515..17 | 2495 | 100 | Minus |
2L | 23513712 | 2L | 5312823..5313093 | 838..568 | 1355 | 100 | Minus |
2L | 23513712 | 2L | 5313269..5313325 | 569..513 | 285 | 100 | Minus |
Blast to na_te.dros performed 2015-02-09 22:12:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-A | 13424 | TART-A 13424bp | 10363..10463 | 224..319 | 115 | 60.4 | Plus |
BS07191.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:05:17 Download gff for
BS07191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 1..822 | 17..838 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:52:35 Download gff for
BS07191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 1..822 | 17..838 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:23:53 Download gff for
BS07191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 270..1098 | 8..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:41:56 Download gff for
BS07191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 276..1104 | 8..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:41:56 Download gff for
BS07191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5312823..5313091 | 570..838 | 100 | <- | Minus |
2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
2L | 5313388..5313891 | 8..513 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:23:53 Download gff for
BS07191.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5312823..5313091 | 570..838 | 100 | <- | Minus |
arm_2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
arm_2L | 5313388..5313891 | 8..513 | 99 | | Minus |
BS07191.complete Sequence
1367 bp (1367 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635759
> BS07191.complete
GAAGTTATCAGTCGACATGCTCATCCGCCTGCGCTATGGAAGACGCCTGC
AGACCTATCTGAAGATAGGCGCCTGTGTCCTGGTCGGCCTGTGCTACTTC
GCCTTCCTTTTCCGCGAATCCCTCAATGCATACGAGCACCGGGAGCGGGC
TACGGCCGCGGAATTGGAGGCGGAATCGGAGCCATCAAAGCAGCAGCTCA
AGCTAAAGCGGCAGCAGTTGCAGCGCCAGCGGATATTGGCCAAGCAGCAG
GAGCAGGGAAAGGGCATCGCTGGGGGAAATGCCAGTGCAGGCAGCTCATC
CTCCCAAGCAGCAGCTCCTCCGCCGCCGCCGCCGGCTACCACCCTGAATC
CCGTGTATGAGTACTCCGAGGAGCTGCACAGTCGCACGGAGCGGGAGCTG
CAGAGGAGGAGCGAGCATCTGGCCGCCGTCTGCGATCGGTATAAGCTGCA
GGAAAAGTACCCACCGAATCCCTGGGAGTTCTTCGTCTCGCCTGGCCACA
ACAATCTCGTCTGGTGCAACGTCTTCAAGGCGGCCAGCAGTACGTGGATG
TATTACTTTAATATATTAGCTGGCTACGATGTGAAGTATCTGCAGCGCAC
GGAGACGCAGCCACTGGAGCTGGCCAGAAAGCGTTTTCCACGCCCGGAAC
TGGGCGAACTGATGGAGCTGCTGCCCAGTGCGCTGTCCTTTCTCTTTGTG
CGCGATCCCTTCGAGCGAATCCTGAGCGCCTATCGCAACAAACTGGAGGG
CAACAAGAACACCTTCTACAAGGCGCTGGGCAACAAGATCGTGCATCGCT
ACAGGAAGCGTAATCTGGGCGGACCCTGGCCGCGATGTGGACCCACCTTC
GAGGAGTTCGTCCGCTTCCTGATCGCCGAGCATGCGGCGGGCAAGAGATT
CGACGAGCACTGGGCACCAGTTTACAGCTTCTGCACGCCCTGCAGCGTTA
ACTTCACCATCATCGGCAAGACGGAGACGTTCCAGAGGGACTCGGAGTTC
ATCATACGGCAGGCGGGCCTGGAATCGCTGCTCCTGGGACTGGGCAAGCT
GCCGCAGCGGAAGCAGCGCAAAATTGGCAACCAGGCGCGAAGTGGCGTTA
AATCCGAGGCCCTGGTCGAGCGATACTTCGCCGATCTCGACCGCTCAACG
TTGGACCAATTGCTCAAGATATATCGCATCGATTTCGAGCTCTTTGACTA
CGACTATCGCAGGTACTACGATATGGTGCATCCGTGGAGTCTGGAGCAGA
GCACTGCCGCATCCGGAGGGCCGGCAGTCGCATCCACCAGTACGACACCA
TCGATATCCTCTGGCCTGGCTGGCCAGTCCACCCAGGGTCAGGCGACGTA
GAAGCTTTCTAGACCAT
BS07191.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:58:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 1335 | CG14024-PB | 1..1335 | 17..1351 | 6675 | 100 | Plus |
CG14024-RA | 1335 | CG14024-PA | 1..1335 | 17..1351 | 6675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:58:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 2616 | CG14024-RB | 283..1617 | 17..1351 | 6675 | 100 | Plus |
CG14024-RA | 1798 | CG14024-RA | 283..1617 | 17..1351 | 6675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:58:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5312310..5313093 | 1351..568 | 3920 | 100 | Minus |
2L | 23513712 | 2L | 5313386..5313884 | 515..17 | 2495 | 100 | Minus |
2L | 23513712 | 2L | 5313269..5313325 | 569..513 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:58:06 has no hits.
BS07191.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:17 Download gff for
BS07191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 1..1335 | 17..1351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:48:44 Download gff for
BS07191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 266..1611 | 8..1355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:43:25 Download gff for
BS07191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 277..1611 | 17..1351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:17 Download gff for
BS07191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 266..1611 | 8..1355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:24 Download gff for
BS07191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 283..1617 | 17..1351 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:24 Download gff for
BS07191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5312310..5313091 | 570..1351 | 100 | <- | Minus |
2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
2L | 5313388..5313884 | 17..513 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:25 Download gff for
BS07191.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5312310..5313091 | 570..1351 | 100 | <- | Minus |
arm_2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
arm_2L | 5313388..5313884 | 17..513 | 100 | | Minus |
BS07191.pep Sequence
Translation from 16 to 1350
> BS07191.pep
MLIRLRYGRRLQTYLKIGACVLVGLCYFAFLFRESLNAYEHRERATAAEL
EAESEPSKQQLKLKRQQLQRQRILAKQQEQGKGIAGGNASAGSSSSQAAA
PPPPPPATTLNPVYEYSEELHSRTERELQRRSEHLAAVCDRYKLQEKYPP
NPWEFFVSPGHNNLVWCNVFKAASSTWMYYFNILAGYDVKYLQRTETQPL
ELARKRFPRPELGELMELLPSALSFLFVRDPFERILSAYRNKLEGNKNTF
YKALGNKIVHRYRKRNLGGPWPRCGPTFEEFVRFLIAEHAAGKRFDEHWA
PVYSFCTPCSVNFTIIGKTETFQRDSEFIIRQAGLESLLLGLGKLPQRKQ
RKIGNQARSGVKSEALVERYFADLDRSTLDQLLKIYRIDFELFDYDYRRY
YDMVHPWSLEQSTAASGGPAVASTSTTPSISSGLAGQSTQGQAT*
BS07191.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-PB | 444 | CG14024-PB | 1..444 | 1..444 | 2330 | 100 | Plus |
CG14024-PA | 444 | CG14024-PA | 1..444 | 1..444 | 2330 | 100 | Plus |
CG13937-PH | 426 | CG13937-PH | 39..415 | 40..406 | 495 | 33.2 | Plus |
CG13937-PI | 363 | CG13937-PI | 73..352 | 123..406 | 489 | 37.7 | Plus |
CG13937-PE | 363 | CG13937-PE | 73..352 | 123..406 | 489 | 37.7 | Plus |