Clone Sequence Records
BS07215.complete Sequence
3101 bp assembled on 2009-12-07
GenBank Submission: KX801754
> BS07215.complete
GAAGTTATCAGTCGACATGGCGCTGGCCATTAAGAAGCGCGTAGGCACCT
ACGTGGAAACGGTGGACGGGTCGCCGCCGGTGAAGAAGCTGCGTCTGCAA
ACGCTGGCCGCTGATGCCAAGGGCGGGAAATCCGGAAAAGTGGGCAATGT
GGAGCGCAAGCTGACGGCGCTCAACCAATTGGACGCCTATGTGGGCAACC
TGCCCGCCGGTGCGTTGGTCCTGCCCACTGGGACACCAGTTGCTTCGACG
GGAGCCCCGTCAACAGGTGTCATCGGAAATCCGCCGGCTGCGGCGACTGG
AGCTCCCCCAATGACGGCCGCGAATAGCAGGGAACTGCTGGAGCTCTTGG
TCAAGATAACCGATGAGATATCCTATGAGGACGTGGAAATGGGCGAGCTT
AAGGAGGTGGCCAGCAAGATCTTCCAACTGTATCAGCTGCAGGAACGCGA
TAGCGACACCTCCATCCGGGTGAAGCTGCTCGAGCTGCTGTCCGGATTGG
GTTGCGAGTGTGCCACCGAGCAGGCGCTTACCATGATCATCGACTACTTT
ATCTTCTTGTTGAGGAAGGAGGTGTCCCAAAAGGTGCTCGCCCAGGGCAT
GATGTGCCTGTTTCGAATCGGGGAGCGCAGGAAGCACATGTTGCCCATAT
CGTACAAAACCCAGGTGGCCCACCTAGCCAAGGAGCAGCTGCGCTCCGGT
TCGGCGCATACGCAGAAGAACGCCATGCTGGTAATCGGTCGTTTTGCCAC
CAAAATGGAGGGTGAGCGTCATTACGTATGGAAGTTAGCCTTCTACATCG
ACTCGCAGGACTCGAGCGTTCGTGCCCAGGCTCTGCACGCCCTGCTGACC
CTCGGCGAACGGGGATCCCAACTGCCGGCGGTGCTCTATAAGCGTGCCGT
CGAGGCCATGAAGGATGACTACGAGTGTGTGCGCAAGGAAGCTCTACAGC
TGGTCTTCATGCTGGGCAATCGGCATCCGGACTACATTTTACCCTCGGAC
CGCCAGCAGGAGGAGCTGCGCATGATAGACGCTGCGTTCAGCAAGGTCTG
CGAAGCCCTGTGCGATCTATCGCTGCAAATTCGCGTGCTCGCAGCGGAAT
TGCTCGGTGGGATGACCGCCGTAAGCAGGGAGTTCCTACACCAGACACTC
GACAAAAAGCTGATGAGCAATCTGCGCCGGAAGCGAACGGCGCACGAGAG
AGGTGCTCGCCTGGTGGCCAGCGGTGAGTGGTCATCGGGTAAACGGTGGG
CGGACGATGCGCCGCAAGAGCACCTCGATGCTCAGAGCATCTCAATTATA
GCCAGCGGCGCCTGTGGCGCCCTTATACATGGCCTAGAGGATGAGTTCCT
CGAGGTGCGTACTGCGGCAGTGGCCTCCATGTGCAAGCTGGCCCTCTCTC
GACCGGATTTCGCGGTGACCAGCCTAGATTTCCTTGTGGACATGTTCAAC
GATGAGATCGAGGATGTGCGGCTGAAGGCCATCTATAGTTTAACGGCCAT
TGCCAAGCACATAGTGCTGCGCGAGGATCAGCTGGAGATAATGCTTGGAT
CGCTTGAGGATTACTCCGTGGACGTGCGTGAGGGACTACATCTCATGCTG
GGCGCCTGTAGAGTGTCCACACAAACGTGCCTGCTAATGGTGGTGCAGAA
GCTGCTAGATGTGCTGGCCAAGTATCCACAGGATCGTAACTCCACCTATG
CCTGCATGCGCAAGATTGGCCAGAAGCATCCACATTTGGTGATGGCTGTC
GCCGTTCACCTGCTTTACGTGCATCCCTTTTTCGAGACGCCCGAACGCGA
TGTCGAGGATCCAGCGTATCTGTGCGTTCTGATACTTGTCTTCAATGCTG
CAGAACATTTGGTGCCCATTATCAGTTTGCTGCCCACGGCCACCCATCGC
CATTACGCCTATCTGAGAGACTCGATGCCGAATCTGGTGCCCCAGTTGCC
CATTGAGGGTGCGTCCTCGGCGAGTGCGACGCACAGGATCGATTCGGCTA
TGCACCAAGCGGGCAGTTCGGCGGAGTACCTGCAGATGATTCTCAGTCAC
ATCGAAGAGATCTTCACCATGACTGACGAGCGCTTGGAGCTGCTCCAGAC
TGCCCAATCTAATCTGCAGCGCCTGGGATCCATTGATGCGGGCATGTACG
GCACCTCAAACTTTCTAGAGACCTTCTTGGCGGCCCAGATCCAGATCGAA
CAGATGCAGCGTTGCGCCAGCACGCAACGAAGCAGGGTGCCCTTGAAGGA
ATCACTGGCAGCACTCATCCGAAACTGTCTCAAGCTGCAGCACACTTTCT
CCGGCCTCAATTACGGCGATATCTTGCAGGTGAAGCAGCTGCGCCTGAGG
GCTTGCGCGCTTCACTTGGTCCTCGTGGTCAGGGATCGCTCACAGAGTGC
ATTGGGCCCGTGCCAGATGCTTTTGCAAACCGCCGGCGATATAAGTGAGT
TCATCAAGGCGAATACGAAGGATGAGGAGGAGAAGCCACCGGTGGTAGAG
ACCGATATGCCCATGAAAGAGTCGGTCAGTAGGGATGCCCAGCCGGATAG
CTTCACCCGCCAGCTGCTAATCAAACTGGATGGCATATCGGATCCCAAGC
CGGGTCGCGTCTTTCGCGAAATTCTGCCGCTGGTCCAGCAGGCTCCTCCG
CTTGCATTGCCACCCGCCAATGACAAAATACGCCGCTGTGTGGCCAACAT
CCTTGAGCCGTGTCCGCTGCAATCGCAGGATAATGTAATTAAGGTCACGG
CTGGCCTGATAGCAGCCGTTCCTTTTGTTGCGGAAATCGACAATCTGCTG
GAGTCCCAGAAGGCGGACATGCGGATCAAGATCAAGTATCCGGACCAGCA
CATGCACACCGTGGTGCCGAAGCAGAGTGACTTCAAGCCCATTATGACGG
AGCAGGGCGAGCACAAGACCAATGTGCGCCTGCGCACCACAATCCTGCTG
TCGCACAGCGTTTGGACGGAGTCGTCGCTGGTGGAGATCCAACTGTGCCT
GGCCGTGCGTCCCGGCAGCGAACTGGAGCTCTGCAAGCCGGCAAAGGTGC
TGTTCGCACCCAAACCAGTCAGGCGGGGCATTTAGAAGCTTTCTAGACCA
T
BS07215.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:11:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS4-RA | 3069 | CG12113-PA | 1..3069 | 17..3085 | 15345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS4-RA | 3466 | CG12113-RA | 83..3152 | 16..3085 | 15350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8556596..8558699 | 2119..16 | 10520 | 100 | Minus |
| X | 23542271 | X | 8555553..8556520 | 3085..2118 | 4840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:11:17 has no hits.
BS07215.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:46:41 Download gff for
BS07215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0095-RA | 64..3132 | 17..3085 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:08 Download gff for
BS07215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 84..3152 | 17..3085 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:08:50 Download gff for
BS07215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0095-RA | 64..3132 | 17..3085 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:53 Download gff for
BS07215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 84..3152 | 17..3085 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:53 Download gff for
BS07215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8555553..8556518 | 2120..3085 | 100 | <- | Minus |
| X | 8556596..8558698 | 17..2119 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:08 Download gff for
BS07215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8449586..8450551 | 2120..3085 | 100 | <- | Minus |
| arm_X | 8450629..8452731 | 17..2119 | 100 | | Minus |
BS07215.3prime Sequence
941 bp (868 high quality bases) assembled on 2006-01-06
> BS07215.3prime
ATGGTCTAGAAAGCTTCTAAATGCCCCGCCTGACTGGTTTGGGTGCGAAC
AGCACCTTTGCCGGCTTGCAGAGCTCCAGTTCGCTGCCGGGACGCACGGC
CAGGCACAGTTGGATCTCCACCAGCGACGACTCCGTCCAAACGCTGTGCG
ACAGCAGGATTGTGGTGCGCAGGCGCACATTGGTCTTGTGCTCGCCCTGC
TCCGTCATAATGGGCTTGAAGTCACTCTGCTTCGGCACCACGGTGTGCAT
GTGCTGGTCCGGATACTTGATCTTGATCCGCATGTCCGCCTTCTGGGACT
CCAGCAGATTGTCGATTTCCGCAACAAAAGGAACGGCTGCTATCAGGCCA
GCCGTGACCTTAATTACATTATCCTGCGATTGCAGCGGACACGGCTCAAG
GATGTTGGCCACACAGCGGCGTATTTTGTCATTGGCGGGTGGCAATGCAA
GCGGAGGAGCCTGCTGGACCAGCGGCAGAATTTCGCGAAAGACGCGACCC
GGCTTGGGATCCGATATGCCATCCAGTTTGATTAGCAGCTGGCGGGTGAA
GCTATCCGGCTGGGCATCCCTACTGACCGACTCTTTCATGGGCATATCGG
TCTCTACCACCGGTGGCTTCTCCTCCTCATCCTTCGTATTCGCCTTGATG
AACTCACTTATATCGCCGGCGGTTTGCAAAAGCATCTGGCACGGGCCCAA
TGCACTCTGTGAGCGATCCCTGACCACGAGGACCAAGTGAAGCGCGCAAG
CCCTCAGGCGCAGCTGCTTCACCTGCAAGATATCGCCGTAATTGAGGCCG
GAGAAAGTGTGCTGCAGCTTGAGACAGTTTCGGATGAGTGCTGCCAGTGA
TTCCTTCAAGGGCACCCTGCTTCGTTGCGTGCTGGCGCAACGCTGCATCT
GTTCGATCTGGATCTGGGGCGCCAAGAAGGTCTCTAGAAAG
BS07215.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:42:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12113-PA | 3069 | l(1)G0095-RA | 2145..3069 | 941..17 | 4600 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:17:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS4-RA | 3466 | CG12113-RA | 2228..3152 | 941..17 | 4610 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:17:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8555553..8556477 | 17..941 | 4610 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:17:37 has no hits.
BS07215.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:05:52 Download gff for
BS07215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12113-PA | 2145..3069 | 17..941 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:53:24 Download gff for
BS07215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12113-PA | 2145..3069 | 17..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:53:51 Download gff for
BS07215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 2228..3155 | 12..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 21:00:07 Download gff for
BS07215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 2228..3155 | 12..941 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 21:00:07 Download gff for
BS07215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8555550..8556477 | 12..941 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:53:51 Download gff for
BS07215.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8449583..8450510 | 12..941 | 99 | | Plus |
BS07215.5prime Sequence
960 bp (804 high quality bases) assembled on 2006-01-06
> BS07215.5prime
GAAGTTATCAGTCGACATGGCGCTGGCCATTAAGAAGCGCGTAGGCACCT
ACGTGGAAACGGTGGACGGGTCGCCGCCGGTGAAGAAGCTGCGTCTGCAA
ACGCTGGCCGCTGATGCCAAGGGCGGGAAATCCGGAAAAGTGGGCAATGT
GGAGCGCAAGCTGACGGCGCTCAACCAATTGGACGCCTATGTGGGCAACC
TGCCCGCCGGTGCGTTGGTCCTGCCCACTGGGACACCAGTTGCTTCGACG
GGAGCCCCGTCAACAGGTGTCATCGGAAATCCGCCGGCTGCGGCGACTGG
AGCTCCCCCAATGACGGCCGCGAATAGCAGGGAACTGCTGGAGCTCTTGG
TCAAGATAACCGATGAGATATCCTATGAGGACGTGGAAATGGGCGAGCTT
AAGGAGGTGGCCAGCAAGATCTTCCAACTGTATCAGCTGCAGGAACGCGA
TAGCGACACCTCCATCCGGGTGAAGCTGCTCGAGCTGCTGTCCGGATTGG
GTTGCGAGTGTGCCACCGAGCAGGCGCTTACCATGATCATCGACTACTTT
ATCTTCTTGTTGAGGAAGGAGGTGTCCCAAAAGGTGCTCGCCCAGGGCAT
GATGTGCCTGTTTCGAATCGGGGAGCGCAGGAAGCACATGTTGCCCATAT
CGTACAAAACCCAGGTGGCCCACCTAGCCAAGGAGCAGCTGCGCTCCGGT
TCGGCGCATACGCAGAAGAACGCCATGCTGGTAATCGGTCGTTTTGCCAC
CAAAATGGAGGGTGAGCGTCATTACGTATGGAAGTTAGCCTTCTACATCG
ACTCGCAGGACTCGAGCGTTCGTGCCCAGGCTCTGCACGCCCTGCTGACC
CTCGGCGAACGGGGATCCCNACTGCCGGCGGTGCTCTATAAGCGTGCCGT
CGAGGGCATGAAGGATGACTACGAGTGTGTGCGCAAGGAAGCTCTACAGC
TGGTCTTCAT
BS07215.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:42:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12113-PA | 3069 | l(1)G0095-RA | 1..944 | 17..960 | 4676 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS4-RA | 3466 | CG12113-RA | 83..1027 | 16..960 | 4699 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:29:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8557755..8558699 | 960..16 | 4699 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 00:29:55 has no hits.
BS07215.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:05:53 Download gff for
BS07215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12113-PA | 1..944 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:53:25 Download gff for
BS07215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12113-PA | 1..944 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:25:10 Download gff for
BS07215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 83..1027 | 16..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:57:34 Download gff for
BS07215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 83..1027 | 16..960 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:57:34 Download gff for
BS07215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8557755..8558699 | 16..960 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:25:10 Download gff for
BS07215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8451788..8452732 | 16..960 | 99 | | Minus |
BS07215.pep Sequence
Translation from 16 to 3084
> BS07215.pep
MALAIKKRVGTYVETVDGSPPVKKLRLQTLAADAKGGKSGKVGNVERKLT
ALNQLDAYVGNLPAGALVLPTGTPVASTGAPSTGVIGNPPAAATGAPPMT
AANSRELLELLVKITDEISYEDVEMGELKEVASKIFQLYQLQERDSDTSI
RVKLLELLSGLGCECATEQALTMIIDYFIFLLRKEVSQKVLAQGMMCLFR
IGERRKHMLPISYKTQVAHLAKEQLRSGSAHTQKNAMLVIGRFATKMEGE
RHYVWKLAFYIDSQDSSVRAQALHALLTLGERGSQLPAVLYKRAVEAMKD
DYECVRKEALQLVFMLGNRHPDYILPSDRQQEELRMIDAAFSKVCEALCD
LSLQIRVLAAELLGGMTAVSREFLHQTLDKKLMSNLRRKRTAHERGARLV
ASGEWSSGKRWADDAPQEHLDAQSISIIASGACGALIHGLEDEFLEVRTA
AVASMCKLALSRPDFAVTSLDFLVDMFNDEIEDVRLKAIYSLTAIAKHIV
LREDQLEIMLGSLEDYSVDVREGLHLMLGACRVSTQTCLLMVVQKLLDVL
AKYPQDRNSTYACMRKIGQKHPHLVMAVAVHLLYVHPFFETPERDVEDPA
YLCVLILVFNAAEHLVPIISLLPTATHRHYAYLRDSMPNLVPQLPIEGAS
SASATHRIDSAMHQAGSSAEYLQMILSHIEEIFTMTDERLELLQTAQSNL
QRLGSIDAGMYGTSNFLETFLAAQIQIEQMQRCASTQRSRVPLKESLAAL
IRNCLKLQHTFSGLNYGDILQVKQLRLRACALHLVLVVRDRSQSALGPCQ
MLLQTAGDISEFIKANTKDEEEKPPVVETDMPMKESVSRDAQPDSFTRQL
LIKLDGISDPKPGRVFREILPLVQQAPPLALPPANDKIRRCVANILEPCP
LQSQDNVIKVTAGLIAAVPFVAEIDNLLESQKADMRIKIKYPDQHMHTVV
PKQSDFKPIMTEQGEHKTNVRLRTTILLSHSVWTESSLVEIQLCLAVRPG
SELELCKPAKVLFAPKPVRRGI*
BS07215.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS4-PA | 1022 | CG12113-PA | 1..1022 | 1..1022 | 5167 | 100 | Plus |
