Clone BS07216 Report

Search the DGRC for BS07216

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:72
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG32982-RA
Protein status:BS07216.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07216.3prime Sequence

810 bp (807 high quality bases) assembled on 2006-01-06

> BS07216.3prime
CACAAATGGGCTAGAAAGCTTCTATACACGCTGTGTGCGTGCCATATATA
GCCCCCGATCCGACTCCGGATCCGAGTCCACCATTATTCCGGCGCTGGGC
GAGTGGCGAGGCTGGTTGGGGAGTCGGTCCATTGTTGTTGTTGAGGCGAC
GCTGCTGACTGTCCGAATAGGCCCGCTCTCGAAACTTAAGGCCCTGGGCT
TCGTTGATGATGGCGGCCAGGGCGGGATGTTGGTAGCGCTCCCGGAAAAT
GGCCGATCCGTTTATGCGATCCGATCCGTTGGTGTTGCCATTCAGGGTGC
CCATGTTCCCATTCCCATTGCCATAGTGCATCATCGTCAGTTTGTGCTGC
GGCGTATGCTGTGGCGTCAGTGATGTGGGGGGCGTGGCATTACCGTTCTT
ATAGTAGCGATTCTGGTTGGGATCGTAAGTGGCCTGCTCCTGATTCTGAT
TGAGACGATTGGCCATCTTGATGGAGGCACAGCGATCCTCCTCGTTGTTG
CGCATCTTCAAGATGCGTTGATCTTGGGTGCTCAGCTTTTTGGCTCGAAA
ACTGCCGCCTGGCGATGAGTTATTCAGCAGTGTTCCCCTCGACGAACTGC
CATTGGTCTCTGTGCTGTCCCTGCTCGCCTCCCGGTAGCTCGAGGGGCGG
TGCGTCGATGGGGGCGTGTCCAGGCCACTATCATGGGCCGAACAGTCCAG
TTCGGTTTTGGCCAGCCCGATGTTGCTGCCGCCGCCAGTGGGTAACATTG
GTTGAACTGAGTGCCTCATATCAGTGGGCGCCCTTGGCTTCCGGTACAGC
CAATCGCGGT

BS07216.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:42:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PA 2148 CG32982-RA 1361..2134 810..37 3870 100 Minus
CG32982-PB 1653 CG32982-RB 1285..1631 523..177 1735 100 Minus
CG32982-PC 1716 CG32982-RC 1348..1694 523..177 1735 100 Minus
CG32982-PB 1653 CG32982-RB 944..1231 810..523 1440 100 Minus
CG32982-PC 1716 CG32982-RC 1007..1294 810..523 1440 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:31:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RF 2931 CG32982-RF 1872..2659 810..22 3905 99.7 Minus
CG32982-RG 2766 CG32982-RG 1707..2494 810..22 3905 99.7 Minus
CG32982-RA 2761 CG32982-RA 1707..2494 810..22 3905 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9162363..9162708 523..178 1730 100 Minus
2L 23513712 2L 9162074..9162309 758..523 1180 100 Minus
2L 23513712 2L 9163293..9163449 179..22 725 98.7 Minus
2L 23513712 2L 9161959..9162012 810..757 270 100 Minus
Blast to na_te.dros performed on 2015-02-02 19:31:49 has no hits.

BS07216.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:05:54 Download gff for BS07216.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1361..2148 22..810 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:53:27 Download gff for BS07216.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1361..2148 22..810 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:01:36 Download gff for BS07216.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 1707..2497 18..810 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:09:32 Download gff for BS07216.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 1707..2497 18..810 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:09:32 Download gff for BS07216.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 9161959..9162012 757..810 100 -> Minus
2L 9162076..9162308 524..756 100 -> Minus
2L 9162363..9162708 178..523 100 -> Minus
2L 9163295..9163452 18..177 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:01:36 Download gff for BS07216.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9161959..9162012 757..810 100 -> Minus
arm_2L 9162076..9162308 524..756 100 -> Minus
arm_2L 9162363..9162708 178..523 100 -> Minus
arm_2L 9163295..9163452 18..177 97   Minus

BS07216.5prime Sequence

853 bp (801 high quality bases) assembled on 2006-01-06

> BS07216.5prime
GAAGTTATCAGTCGACATGCTCATGCACACAACATCAATTTCCACAACGT
CGACGGCCACCATGACCAACTCATCGTCCTCCGCCACGCCCACACCCGGG
TCGACTTCCTCCAACAACAGTGCCACGCTCGACGCGCTGCACCAGCAACA
ACAGCAGCAGCACCAGCAGCATCAGCTGCAGCAACAACTGCAGCAGTTGC
ACACGAACGCCGCAAACAATTCACGGCCCCCCTCACGTGCCCCCTCCATT
CTGGACAGTCCGACCCTGGCGCGTGTGGAGCGGGCTCGTCTGCGACTGGA
GCAGCAGGAGCGGGAGCGGGAACGGGAGCGTAGCAGCCAGCGGGAGGTGG
GCGGCGGCAGCGGAGGAGGCGGCGGCGGTGGTAGCAGCACTGGCACTGGC
AGCACCGCCACAACCATGAATCGTGAGGATAGCCTGGAGCGCAGTATTTT
GGATCCCAAGCAATCCTTGCTGGCAGGACGCATTCCGGTGGCCTCCATGA
CAGGACCCATTAAACGCGGACTGCTCTGGCAGCAAAGGGATCGGCTCTTC
TCTCGCTGGAAGGAGCGATACTTTGTGCTCACTCGTGACTACTTGCACTG
CTTCAAAAGAGCCTCGGGATCGGCCAATGAACGTGCCTCGGATATGGGAC
AGTTTATCTTCAAGGTCAAGCTGGTGGACGTGGAGAAGGTGGAGTGGCTG
AATCGGCGCTCCTACAGCGCCATTGGTCTGCTACTGGGTCGCGAGGGTCG
TGTTCTACTCCGCTGCGATGATGGCCTCGAGGATTGGTTCGAGCTGCTGG
AGGAATGCACAATGACCTCCAAGGAGCGCAGACGAGCCCTGAAGATTGCC
CAA

BS07216.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:42:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PA 2148 CG32982-RA 1..837 17..853 4185 100 Plus
CG32982-PB 1653 CG32982-RB 27..420 460..853 1970 100 Plus
CG32982-PC 1716 CG32982-RC 91..483 461..853 1965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RG 2766 CG32982-RG 347..1183 17..853 4185 100 Plus
CG32982-RA 2761 CG32982-RA 347..1183 17..853 4185 100 Plus
CG32982-RH 2682 CG32982-RH 347..995 17..665 3245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9127023..9127466 17..460 2220 100 Plus
2L 23513712 2L 9161129..9161269 663..803 705 100 Plus
2L 23513712 2L 9154657..9154765 459..567 545 100 Plus
2L 23513712 2L 9156497..9156596 567..666 500 100 Plus
2L 23513712 2L 9161383..9161435 801..853 265 100 Plus
Blast to na_te.dros performed on 2015-02-11 18:22:14 has no hits.

BS07216.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:05:55 Download gff for BS07216.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1..835 17..851 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:53:28 Download gff for BS07216.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1..835 17..851 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:27:23 Download gff for BS07216.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..1181 17..851 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:59:11 Download gff for BS07216.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..1181 17..851 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:59:11 Download gff for BS07216.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9161131..9161268 665..802 100 -> Plus
2L 9161385..9161433 803..851 100   Plus
2L 9127023..9127466 17..460 100 -> Plus
2L 9154659..9154765 461..567 100 -> Plus
2L 9156498..9156594 568..664 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:27:23 Download gff for BS07216.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9154659..9154765 461..567 100 -> Plus
arm_2L 9156498..9156594 568..664 100 -> Plus
arm_2L 9127023..9127466 17..460 100 -> Plus
arm_2L 9161131..9161268 665..802 100 -> Plus
arm_2L 9161385..9161433 803..851 100   Plus

BS07216.complete Sequence

2180 bp assembled on 2008-01-02

GenBank Submission: FJ635770

> BS07216.complete
GAAGTTATCAGTCGACATGCTCATGCACACAACATCAATTTCCACAACGT
CGACGGCCACCATGACCAACTCATCGTCCTCCGCCACGCCCACACCCGGG
TCGACTTCCTCCAACAACAGTGCCACGCTCGACGCGCTGCACCAGCAACA
ACAGCAGCAGCACCAGCAGCATCAGCTGCAGCAACAACTGCAGCAGTTGC
ACACGAACGCCGCAAACAATTCACGGCCCCCCTCACGTGCCCCCTCCATT
CTGGACAGTCCGACCCTGGCGCGTGTGGAGCGGGCTCGTCTGCGACTGGA
GCAGCAGGAGCGGGAGCGGGAACGGGAGCGTAGCAGCCAGCGGGAGGTGG
GCGGCGGCAGCGGAGGAGGCGGCGGCGGTGGTAGCAGCACTGGCACTGGC
AGCACCGCCACAACCATGAATCGTGAGGATAGCCTGGAGCGCAGTATTTT
GGATCCCAAGCAATCCTTGCTGGCAGGACGCATTCCGGTGGCCTCCATGA
CAGGACCCATTAAACGCGGACTGCTCTGGCAGCAAAGGGATCGGCTCTTC
TCTCGCTGGAAGGAGCGATACTTTGTGCTCACTCGTGACTACTTGCACTG
CTTCAAAAGAGCCTCGGGATCGGCCAATGAACGTGCCTCGGATATGGGAC
AGTTTATCTTCAAGGTCAAGCTGGTGGACGTGGAGAAGGTGGAGTGGCTG
AATCGGCGCTCCTACAGCGCCATTGGTCTGCTACTGGGTCGCGAGGGTCG
TGTTCTACTCCGCTGCGATGATGGCCTCGAGGATTGGTTCGAGCTGCTGG
AGGAATGCACAATGACCTCCAAGGAGCGCAGACGAGCCCTGAAGATTGCC
CAAGGACCCAGATCCCGAGCCTCATTGGCTGCTCCCGTTTCGCATGCTTC
GCTGCAGTTCCAGCATTTTGGACTCGGAGGCACTTACTCGAGTGCCCTGG
ACGATTGGCTGATGACGAATGGAACCGGTGGTCTGGCCCGGCACAAGATT
GGAGCTGGCAGTCTGAACGGTTATGGCGGGGCCAATCCCTTCCTGTTCTC
CGATTCGGTGCCGGATCTGAGTGCCCTGAACAACGAAAACCACAATCATC
ACCTGAGCGGCATCAGCACGAACCACTCGACGCCGCAAAAGATACCGCAC
CACAGCAATGCGAATCTCAGTCGATACTCCAATGGATATGTCTCGGCCCA
GAACAGTTTCACCCAAGCCGGAGCACTCTACGGATCGCCTAGGCGGATCT
TTATCAACAGCAGCTTCGGTTCCAATCAGGTGGTGGATGAGGAGACCGAG
GAGACGGAGGTTCAGCTGAGGAGACCCAGACTGTTCCGGGGAGTTAGCGC
TACTCCGGATAATGGCAACGAACTGGACCGCGATTGGCTGTACCGGAAGC
CAAGGGCGCCCACTGATATGAGGCACTCAGTTCAACCAATGTTACCCACT
GGCGGCGGCAGCAACATCGGGCTGGCCAAAACCGAACTGGACTGTTCGGC
CCATGATAGTGGCCTGGACACGCCCCCATCGACGCACCGCCCCTCGAGCT
ACCGGGAGGCGAGCAGGGACAGCACAGAGACCAATGGCAGTTCGTCGAGG
GGAACACTGCTGAATAACTCATCGCCAGGCGGCAGTTTTCGAGCCAAAAA
GCTGAGCACCCAAGATCAACGCATCTTGAAGATGCGCAACAACGAGGAGG
ATCGCTGTGCCTCCATCAAGATGGCCAATCGTCTCAATCAGAATCAGGAG
CAGGCCACTTACGATCCCAACCAGAATCGCTACTATAAGAACGGTAATGC
CACGCCCCCCACATCACTGACGCCACAGCATACGCCGCAGCACAAACTGA
CGATGATGCACTATGGCAATGGGAATGGGAACATGGGCACCCTGAATGGC
AACACCAACGGATCGGATCGCATAAACGGATCGGCCATTTTCCGGGAGCG
CTACCAACATCCCGCCCTGGCCGCCATCATCAACGAAGCCCAGGGCCTTA
AGTTTCGAGAGCGGGCCTATTCGGACAGTCAGCAGCGTCGCCTCAACAAC
AACAATGGACCGACTCCCCAACCAGCCTCGCCACTCGCCCAGCGCCGGAA
TAATGGTGGACTCGGATCCGGAGTCGGATCGGGGGCTATATATGGCACGC
CCACGCGTGTATAGAAGCTTTCTAGACCAT

BS07216.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:43:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RG 2163 CG32982-PG 1..2148 17..2164 10740 100 Plus
CG32982-RA 2148 CG32982-PA 1..2148 17..2164 10740 100 Plus
CG32982-RF 2193 CG32982-PF 490..2193 461..2164 8520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:43:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RG 2766 CG32982-RG 347..2494 17..2164 10740 100 Plus
CG32982-RA 2761 CG32982-RA 347..2494 17..2164 10740 100 Plus
CG32982-RF 2931 CG32982-RF 956..2659 461..2164 8520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:43:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9161383..9162012 801..1430 3150 100 Plus
2L 23513712 2L 9127023..9127466 17..460 2220 100 Plus
2L 23513712 2L 9162363..9162708 1664..2009 1730 100 Plus
2L 23513712 2L 9162074..9162309 1429..1664 1180 100 Plus
2L 23513712 2L 9163293..9163449 2008..2164 785 100 Plus
2L 23513712 2L 9161129..9161269 663..803 705 100 Plus
2L 23513712 2L 9154657..9154765 459..567 545 100 Plus
2L 23513712 2L 9156497..9156596 567..666 500 100 Plus
Blast to na_te.dros performed on 2014-11-28 07:43:24 has no hits.

BS07216.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:06:57 Download gff for BS07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 1..2148 17..2164 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:37:11 Download gff for BS07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 333..2480 17..2164 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:55 Download gff for BS07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..2494 17..2164 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:06:58 Download gff for BS07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 333..2483 17..2168 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:02:28 Download gff for BS07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..2494 17..2164 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:02:28 Download gff for BS07216.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9163295..9163449 2010..2164 100   Plus
2L 9162076..9162308 1431..1663 100 -> Plus
2L 9162363..9162708 1664..2009 100 -> Plus
2L 9127023..9127466 17..460 100 -> Plus
2L 9154659..9154765 461..567 100 -> Plus
2L 9156498..9156594 568..664 100 -> Plus
2L 9161131..9161268 665..802 100 -> Plus
2L 9161385..9162012 803..1430 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:55 Download gff for BS07216.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9163295..9163449 2010..2164 100   Plus
arm_2L 9162363..9162708 1664..2009 100 -> Plus
arm_2L 9127023..9127466 17..460 100 -> Plus
arm_2L 9154659..9154765 461..567 100 -> Plus
arm_2L 9156498..9156594 568..664 100 -> Plus
arm_2L 9161131..9161268 665..802 100 -> Plus
arm_2L 9161385..9162012 803..1430 100 -> Plus
arm_2L 9162076..9162308 1431..1663 100 -> Plus

BS07216.pep Sequence

Translation from 16 to 2163

> BS07216.pep
MLMHTTSISTTSTATMTNSSSSATPTPGSTSSNNSATLDALHQQQQQQHQ
QHQLQQQLQQLHTNAANNSRPPSRAPSILDSPTLARVERARLRLEQQERE
RERERSSQREVGGGSGGGGGGGSSTGTGSTATTMNREDSLERSILDPKQS
LLAGRIPVASMTGPIKRGLLWQQRDRLFSRWKERYFVLTRDYLHCFKRAS
GSANERASDMGQFIFKVKLVDVEKVEWLNRRSYSAIGLLLGREGRVLLRC
DDGLEDWFELLEECTMTSKERRRALKIAQGPRSRASLAAPVSHASLQFQH
FGLGGTYSSALDDWLMTNGTGGLARHKIGAGSLNGYGGANPFLFSDSVPD
LSALNNENHNHHLSGISTNHSTPQKIPHHSNANLSRYSNGYVSAQNSFTQ
AGALYGSPRRIFINSSFGSNQVVDEETEETEVQLRRPRLFRGVSATPDNG
NELDRDWLYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKTELDCSAHDSGL
DTPPSTHRPSSYREASRDSTETNGSSSRGTLLNNSSPGGSFRAKKLSTQD
QRILKMRNNEEDRCASIKMANRLNQNQEQATYDPNQNRYYKNGNATPPTS
LTPQHTPQHKLTMMHYGNGNGNMGTLNGNTNGSDRINGSAIFRERYQHPA
LAAIINEAQGLKFRERAYSDSQQRRLNNNNGPTPQPASPLAQRRNNGGLG
SGVGSGAIYGTPTRV*

BS07216.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PG 720 CG32982-PG 1..715 1..715 3736 100 Plus
CG32982-PA 715 CG32982-PA 1..715 1..715 3736 100 Plus
CG32982-PF 730 CG32982-PF 1..730 1..715 3710 97.9 Plus
CG32982-PH 687 CG32982-PH 1..687 1..715 3411 91.3 Plus
CG32982-PD 778 CG32982-PD 1..774 1..667 2717 72.7 Plus