Clone BS07255 Report

Search the DGRC for BS07255

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:72
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptGstE1-RA
Protein status:BS07255.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07255.3prime Sequence

705 bp (704 high quality bases) assembled on 2006-01-06

> BS07255.3prime
ATGGTCTAGAAAGCTTTCACTTGTCGCCCAGCTTGGTCCACTTGCTGCGC
AGGAAGGCGACGTAGCTCTGGGCCGGAGCTTCGTTGATCTCCTTGTAGTA
GGGCAGCTTATTGAGGCGATCCAACCAGGCGGTGACCTTGGGATATGTAG
CAGGATCTATGTCCACGGCAGCGGGCACGGCGCTTACAGTGGGTCCGGTG
GACAGATCGGCTAGGGTTAGCGAATCGCCGGCCAGGTAGGGGCTGTTGCC
CAGGAACGTCTCCAGCAGCTTCAGACCCTGGTGTACGGCGTCCAGTTTTT
CCTGGGGCACTTCGGTAACACCGTTTATCCAAAACGGGCGGCTGACATTG
GCTATACTGGCATAGATTACACTGGCATCGAAGAAGAGACGCTGATTGAC
GATCGCACGCTTGGCCAGATCCTTGGGATACAGCTCATCCGACTTGGCAT
ACTTGTCCACCAAGTAGGCGGCAATGGCATGGGAGTCCCAGATGAAAGTG
CCATTATCATCGAGCATCGGTACCGTGTGTTGGGGATTCTTCTTCACATA
TTCCTCGCTCAGGTGCTCGCCCGCCTGAAGATTCACCTCCTTGTACTCGT
AGTCCAGATTCAGGACCTTTAGGGTAAGTTTGACGGTCCTCACACAGGGA
CTGAGATCTGTCCCATAGAGTACAATTCCAGAGCTCGACATGTCGACTGA
TAACT

BS07255.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:43:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG5164-PA 675 GstE1-RA 1..675 691..17 3375 100 Minus
CG17523-PA 666 GstE2-RA 227..274 462..415 165 93.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:20:53
Subject Length Description Subject Range Query Range Score Percent Strand
GstE1-RA 831 CG5164-RA 39..716 692..15 3390 100 Minus
GstE2-RA 890 CG17523-RA 121..355 606..372 305 75.3 Minus
GstE10-RB 1134 CG17522-RB 451..574 541..418 245 79.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18398431..18399108 692..15 3390 100 Minus
2R 25286936 2R 18399606..18399840 606..372 305 75.3 Minus
2R 25286936 2R 18397198..18397321 418..541 245 79.8 Plus
Blast to na_te.dros performed on 2015-02-11 16:20:49 has no hits.

BS07255.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:07:15 Download gff for BS07255.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE1-PA 1..675 17..691 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:55:22 Download gff for BS07255.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5164-PA 1..675 17..691 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:41:51 Download gff for BS07255.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 39..718 12..692 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:14:16 Download gff for BS07255.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 39..718 12..692 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:14:16 Download gff for BS07255.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 18398431..18399110 12..692 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:41:51 Download gff for BS07255.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14285936..14286615 12..692 99   Minus

BS07255.5prime Sequence

705 bp (704 high quality bases) assembled on 2006-01-06

> BS07255.5prime
GAAGTTATCAGTCGACATGTCGAGCTCTGGAATTGTACTCTATGGGACAG
ATCTCAGTCCCTGTGTGAGGACCGTCAAACTTACCCTAAAGGTCCTGAAT
CTGGACTACGAGTACAAGGAGGTGAATCTTCAGGCGGGCGAGCACCTGAG
CGAGGAATATGTGAAGAAGAATCCCCAACACACGGTACCGATGCTCGATG
ATAATGGCACTTTCATCTGGGACTCCCATGCCATTGCCGCCTACTTGGTG
GACAAGTATGCCAAGTCGGATGAGCTGTATCCCAAGGATCTGGCCAAGCG
TGCGATCGTCAATCAGCGTCTCTTCTTCGATGCCAGTGTAATCTATGCCA
GTATAGCCAATGTCAGCCGCCCGTTTTGGATAAACGGTGTTACCGAAGTG
CCCCAGGAAAAACTGGACGCCGTACACCAGGGTCTGAAGCTGCTGGAGAC
GTTCCTGGGCAACAGCCCCTACCTGGCCGGCGATTCGCTAACCCTAGCCG
ATCTGTCCACCGGACCCACTGTAAGCGCCGTGCCCGCTGCCGTGGACATA
GATCCTGCTACATATCCCAAGGTCACCGCCTGGTTGGATCGCCTCAATAA
GCTGCCCTACTACAAGGAGATCAACGAAGCTCCGGCCCAGAGCTACGTCG
CCTTCCTGCGCAGCAAGTGGACCAAGCTGGGCGACAAGTGAAAGCTTTCT
AGACC

BS07255.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:43:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG5164-PA 675 GstE1-RA 1..675 17..691 3375 100 Plus
CG17523-PA 666 GstE2-RA 227..274 246..293 165 93.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
GstE1-RA 831 CG5164-RA 39..716 16..693 3390 100 Plus
GstE2-RA 890 CG17523-RA 121..355 102..336 305 75.3 Plus
GstE10-RB 1134 CG17522-RB 451..574 167..290 245 79.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:37:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18398431..18399108 16..693 3390 100 Plus
2R 25286936 2R 18399606..18399840 102..336 305 75.3 Plus
2R 25286936 2R 18397198..18397321 290..167 245 79.8 Minus
Blast to na_te.dros performed on 2015-02-10 04:37:39 has no hits.

BS07255.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:07:16 Download gff for BS07255.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE1-PA 1..675 17..691 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:55:23 Download gff for BS07255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5164-PA 1..675 17..691 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:49:09 Download gff for BS07255.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 39..718 16..696 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:24:46 Download gff for BS07255.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 39..718 16..696 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:24:46 Download gff for BS07255.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18398431..18399110 16..696 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:49:09 Download gff for BS07255.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14285936..14286615 16..696 99   Plus

BS07255.complete Sequence

707 bp (707 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635790

> BS07255.complete
GAAGTTATCAGTCGACATGTCGAGCTCTGGAATTGTACTCTATGGGACAG
ATCTCAGTCCCTGTGTGAGGACCGTCAAACTTACCCTAAAGGTCCTGAAT
CTGGACTACGAGTACAAGGAGGTGAATCTTCAGGCGGGCGAGCACCTGAG
CGAGGAATATGTGAAGAAGAATCCCCAACACACGGTACCGATGCTCGATG
ATAATGGCACTTTCATCTGGGACTCCCATGCCATTGCCGCCTACTTGGTG
GACAAGTATGCCAAGTCGGATGAGCTGTATCCCAAGGATCTGGCCAAGCG
TGCGATCGTCAATCAGCGTCTCTTCTTCGATGCCAGTGTAATCTATGCCA
GTATAGCCAATGTCAGCCGCCCGTTTTGGATAAACGGTGTTACCGAAGTG
CCCCAGGAAAAACTGGACGCCGTACACCAGGGTCTGAAGCTGCTGGAGAC
GTTCCTGGGCAACAGCCCCTACCTGGCCGGCGATTCGCTAACCCTAGCCG
ATCTGTCCACCGGACCCACTGTAAGCGCCGTGCCCGCTGCCGTGGACATA
GATCCTGCTACATATCCCAAGGTCACCGCCTGGTTGGATCGCCTCAATAA
GCTGCCCTACTACAAGGAGATCAACGAAGCTCCGGCCCAGAGCTACGTCG
CCTTCCTGCGCAGCAAGTGGACCAAGCTGGGCGACAAGTGAAAGCTTTCT
AGACCAT

BS07255.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
GstE1-RA 675 CG5164-PA 1..675 17..691 3375 100 Plus
GstE2-RA 666 CG17523-PA 83..317 102..336 305 75.3 Plus
GstE10-RB 723 CG17522-PB 145..268 167..290 245 79.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
GstE1-RA 831 CG5164-RA 39..716 16..693 3390 100 Plus
GstE2-RA 890 CG17523-RA 121..355 102..336 305 75.3 Plus
GstE10-RB 1134 CG17522-RB 451..574 167..290 245 79.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18398431..18399108 16..693 3390 100 Plus
2R 25286936 2R 18399606..18399840 102..336 305 75.3 Plus
2R 25286936 2R 18397198..18397321 290..167 245 79.8 Minus
Blast to na_te.dros performed on 2014-11-27 13:21:22 has no hits.

BS07255.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:47 Download gff for BS07255.complete
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 1..675 17..691 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:48:07 Download gff for BS07255.complete
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 42..721 16..696 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:49:47 Download gff for BS07255.complete
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 40..713 17..690 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:47 Download gff for BS07255.complete
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 42..721 16..696 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:33 Download gff for BS07255.complete
Subject Subject Range Query Range Percent Splice Strand
GstE1-RA 40..713 17..690 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:33 Download gff for BS07255.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18398432..18399105 17..690 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:49:47 Download gff for BS07255.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14285937..14286610 17..690 100   Plus

BS07255.pep Sequence

Translation from 16 to 690

> BS07255.pep
MSSSGIVLYGTDLSPCVRTVKLTLKVLNLDYEYKEVNLQAGEHLSEEYVK
KNPQHTVPMLDDNGTFIWDSHAIAAYLVDKYAKSDELYPKDLAKRAIVNQ
RLFFDASVIYASIANVSRPFWINGVTEVPQEKLDAVHQGLKLLETFLGNS
PYLAGDSLTLADLSTGPTVSAVPAAVDIDPATYPKVTAWLDRLNKLPYYK
EINEAPAQSYVAFLRSKWTKLGDK*

BS07255.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
GstE1-PA 224 CG5164-PA 1..224 1..224 1162 100 Plus
GstE2-PA 221 CG17523-PA 2..214 3..215 652 56.3 Plus
GstE7-PA 223 CG17531-PA 4..214 6..215 562 49.8 Plus
GstE9-PA 221 CG17534-PA 4..220 6..221 559 49.3 Plus
GstE5-PA 222 CG17527-PA 4..215 6..216 558 49.5 Plus