Clone Sequence Records
BS07255.3prime Sequence
705 bp (704 high quality bases) assembled on 2006-01-06
> BS07255.3prime
ATGGTCTAGAAAGCTTTCACTTGTCGCCCAGCTTGGTCCACTTGCTGCGC
AGGAAGGCGACGTAGCTCTGGGCCGGAGCTTCGTTGATCTCCTTGTAGTA
GGGCAGCTTATTGAGGCGATCCAACCAGGCGGTGACCTTGGGATATGTAG
CAGGATCTATGTCCACGGCAGCGGGCACGGCGCTTACAGTGGGTCCGGTG
GACAGATCGGCTAGGGTTAGCGAATCGCCGGCCAGGTAGGGGCTGTTGCC
CAGGAACGTCTCCAGCAGCTTCAGACCCTGGTGTACGGCGTCCAGTTTTT
CCTGGGGCACTTCGGTAACACCGTTTATCCAAAACGGGCGGCTGACATTG
GCTATACTGGCATAGATTACACTGGCATCGAAGAAGAGACGCTGATTGAC
GATCGCACGCTTGGCCAGATCCTTGGGATACAGCTCATCCGACTTGGCAT
ACTTGTCCACCAAGTAGGCGGCAATGGCATGGGAGTCCCAGATGAAAGTG
CCATTATCATCGAGCATCGGTACCGTGTGTTGGGGATTCTTCTTCACATA
TTCCTCGCTCAGGTGCTCGCCCGCCTGAAGATTCACCTCCTTGTACTCGT
AGTCCAGATTCAGGACCTTTAGGGTAAGTTTGACGGTCCTCACACAGGGA
CTGAGATCTGTCCCATAGAGTACAATTCCAGAGCTCGACATGTCGACTGA
TAACT
BS07255.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:43:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5164-PA | 675 | GstE1-RA | 1..675 | 691..17 | 3375 | 100 | Minus |
CG17523-PA | 666 | GstE2-RA | 227..274 | 462..415 | 165 | 93.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:20:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE1-RA | 831 | CG5164-RA | 39..716 | 692..15 | 3390 | 100 | Minus |
GstE2-RA | 890 | CG17523-RA | 121..355 | 606..372 | 305 | 75.3 | Minus |
GstE10-RB | 1134 | CG17522-RB | 451..574 | 541..418 | 245 | 79.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:20:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18398431..18399108 | 692..15 | 3390 | 100 | Minus |
2R | 25286936 | 2R | 18399606..18399840 | 606..372 | 305 | 75.3 | Minus |
2R | 25286936 | 2R | 18397198..18397321 | 418..541 | 245 | 79.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:20:49 has no hits.
BS07255.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:07:15 Download gff for
BS07255.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-PA | 1..675 | 17..691 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:55:22 Download gff for
BS07255.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5164-PA | 1..675 | 17..691 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:41:51 Download gff for
BS07255.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 39..718 | 12..692 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:14:16 Download gff for
BS07255.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 39..718 | 12..692 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:14:16 Download gff for
BS07255.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18398431..18399110 | 12..692 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:41:51 Download gff for
BS07255.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14285936..14286615 | 12..692 | 99 | | Minus |
BS07255.5prime Sequence
705 bp (704 high quality bases) assembled on 2006-01-06
> BS07255.5prime
GAAGTTATCAGTCGACATGTCGAGCTCTGGAATTGTACTCTATGGGACAG
ATCTCAGTCCCTGTGTGAGGACCGTCAAACTTACCCTAAAGGTCCTGAAT
CTGGACTACGAGTACAAGGAGGTGAATCTTCAGGCGGGCGAGCACCTGAG
CGAGGAATATGTGAAGAAGAATCCCCAACACACGGTACCGATGCTCGATG
ATAATGGCACTTTCATCTGGGACTCCCATGCCATTGCCGCCTACTTGGTG
GACAAGTATGCCAAGTCGGATGAGCTGTATCCCAAGGATCTGGCCAAGCG
TGCGATCGTCAATCAGCGTCTCTTCTTCGATGCCAGTGTAATCTATGCCA
GTATAGCCAATGTCAGCCGCCCGTTTTGGATAAACGGTGTTACCGAAGTG
CCCCAGGAAAAACTGGACGCCGTACACCAGGGTCTGAAGCTGCTGGAGAC
GTTCCTGGGCAACAGCCCCTACCTGGCCGGCGATTCGCTAACCCTAGCCG
ATCTGTCCACCGGACCCACTGTAAGCGCCGTGCCCGCTGCCGTGGACATA
GATCCTGCTACATATCCCAAGGTCACCGCCTGGTTGGATCGCCTCAATAA
GCTGCCCTACTACAAGGAGATCAACGAAGCTCCGGCCCAGAGCTACGTCG
CCTTCCTGCGCAGCAAGTGGACCAAGCTGGGCGACAAGTGAAAGCTTTCT
AGACC
BS07255.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:43:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5164-PA | 675 | GstE1-RA | 1..675 | 17..691 | 3375 | 100 | Plus |
CG17523-PA | 666 | GstE2-RA | 227..274 | 246..293 | 165 | 93.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:37:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE1-RA | 831 | CG5164-RA | 39..716 | 16..693 | 3390 | 100 | Plus |
GstE2-RA | 890 | CG17523-RA | 121..355 | 102..336 | 305 | 75.3 | Plus |
GstE10-RB | 1134 | CG17522-RB | 451..574 | 167..290 | 245 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:37:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18398431..18399108 | 16..693 | 3390 | 100 | Plus |
2R | 25286936 | 2R | 18399606..18399840 | 102..336 | 305 | 75.3 | Plus |
2R | 25286936 | 2R | 18397198..18397321 | 290..167 | 245 | 79.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 04:37:39 has no hits.
BS07255.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:07:16 Download gff for
BS07255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-PA | 1..675 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:55:23 Download gff for
BS07255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5164-PA | 1..675 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:49:09 Download gff for
BS07255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 39..718 | 16..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:24:46 Download gff for
BS07255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 39..718 | 16..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:24:46 Download gff for
BS07255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18398431..18399110 | 16..696 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:49:09 Download gff for
BS07255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14285936..14286615 | 16..696 | 99 | | Plus |
BS07255.complete Sequence
707 bp (707 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635790
> BS07255.complete
GAAGTTATCAGTCGACATGTCGAGCTCTGGAATTGTACTCTATGGGACAG
ATCTCAGTCCCTGTGTGAGGACCGTCAAACTTACCCTAAAGGTCCTGAAT
CTGGACTACGAGTACAAGGAGGTGAATCTTCAGGCGGGCGAGCACCTGAG
CGAGGAATATGTGAAGAAGAATCCCCAACACACGGTACCGATGCTCGATG
ATAATGGCACTTTCATCTGGGACTCCCATGCCATTGCCGCCTACTTGGTG
GACAAGTATGCCAAGTCGGATGAGCTGTATCCCAAGGATCTGGCCAAGCG
TGCGATCGTCAATCAGCGTCTCTTCTTCGATGCCAGTGTAATCTATGCCA
GTATAGCCAATGTCAGCCGCCCGTTTTGGATAAACGGTGTTACCGAAGTG
CCCCAGGAAAAACTGGACGCCGTACACCAGGGTCTGAAGCTGCTGGAGAC
GTTCCTGGGCAACAGCCCCTACCTGGCCGGCGATTCGCTAACCCTAGCCG
ATCTGTCCACCGGACCCACTGTAAGCGCCGTGCCCGCTGCCGTGGACATA
GATCCTGCTACATATCCCAAGGTCACCGCCTGGTTGGATCGCCTCAATAA
GCTGCCCTACTACAAGGAGATCAACGAAGCTCCGGCCCAGAGCTACGTCG
CCTTCCTGCGCAGCAAGTGGACCAAGCTGGGCGACAAGTGAAAGCTTTCT
AGACCAT
BS07255.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE1-RA | 675 | CG5164-PA | 1..675 | 17..691 | 3375 | 100 | Plus |
GstE2-RA | 666 | CG17523-PA | 83..317 | 102..336 | 305 | 75.3 | Plus |
GstE10-RB | 723 | CG17522-PB | 145..268 | 167..290 | 245 | 79.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE1-RA | 831 | CG5164-RA | 39..716 | 16..693 | 3390 | 100 | Plus |
GstE2-RA | 890 | CG17523-RA | 121..355 | 102..336 | 305 | 75.3 | Plus |
GstE10-RB | 1134 | CG17522-RB | 451..574 | 167..290 | 245 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:21:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18398431..18399108 | 16..693 | 3390 | 100 | Plus |
2R | 25286936 | 2R | 18399606..18399840 | 102..336 | 305 | 75.3 | Plus |
2R | 25286936 | 2R | 18397198..18397321 | 290..167 | 245 | 79.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:21:22 has no hits.
BS07255.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:47 Download gff for
BS07255.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 1..675 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:48:07 Download gff for
BS07255.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 42..721 | 16..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:49:47 Download gff for
BS07255.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 40..713 | 17..690 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:47 Download gff for
BS07255.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 42..721 | 16..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:33 Download gff for
BS07255.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE1-RA | 40..713 | 17..690 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:33 Download gff for
BS07255.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18398432..18399105 | 17..690 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:49:47 Download gff for
BS07255.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14285937..14286610 | 17..690 | 100 | | Plus |
BS07255.pep Sequence
Translation from 16 to 690
> BS07255.pep
MSSSGIVLYGTDLSPCVRTVKLTLKVLNLDYEYKEVNLQAGEHLSEEYVK
KNPQHTVPMLDDNGTFIWDSHAIAAYLVDKYAKSDELYPKDLAKRAIVNQ
RLFFDASVIYASIANVSRPFWINGVTEVPQEKLDAVHQGLKLLETFLGNS
PYLAGDSLTLADLSTGPTVSAVPAAVDIDPATYPKVTAWLDRLNKLPYYK
EINEAPAQSYVAFLRSKWTKLGDK*
BS07255.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:23:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE1-PA | 224 | CG5164-PA | 1..224 | 1..224 | 1162 | 100 | Plus |
GstE2-PA | 221 | CG17523-PA | 2..214 | 3..215 | 652 | 56.3 | Plus |
GstE7-PA | 223 | CG17531-PA | 4..214 | 6..215 | 562 | 49.8 | Plus |
GstE9-PA | 221 | CG17534-PA | 4..220 | 6..221 | 559 | 49.3 | Plus |
GstE5-PA | 222 | CG17527-PA | 4..215 | 6..216 | 558 | 49.5 | Plus |