Clone BS07267 Report

Search the DGRC for BS07267

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:72
Well:67
Vector:pDNR-Dual
Associated Gene/Transcriptdlg1-RF
Protein status:BS07267.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07267.3prime Sequence

951 bp (880 high quality bases) assembled on 2006-01-06

> BS07267.3prime
ATGGTCTAGAAAGCTTTCAGATGCTCGACTTACGATAGTCAGCATCATTA
TTCTCCAAGTAGATCAGAGTTATCTGCTCCATATCGGGTAACTCCACCCT
GTAGATAATCTCGCCTCCTTCAGCATTGGCATCGTCTTGTGTGTAGCAAA
GCATAAAGGCTGTCGACTGCGAATTGACCATCGGCGTCGCATGCTGCTGC
TGATGCACCTGACTTTGGCTCTGGCTGGTGGCCAACTGCGATTGGGACTG
CGACAATTGTTGTCCGGATGAAAGGCCTCCTCCTCCGCCGCCGGACGCAC
TGGTGGTCAGATGCTGTGTCTTTCCAATGATCAGCGTCACCTTGTCGGTG
ATCGATTTCAACGTGGCCACCGCCAGTTCGTGCGTTACGTTCTCCAGGTT
CTTCTCGCTCCCGTTGGTGCGCACTGCAATCAGCTTATCTCCGATGGAGA
GACGTCCGTCCACCTGCGCTGCTCCGCCGTCCATCAACTTGGTCACATAG
ATGCCATTGTCGCCGGGGATGTGCTGGTTGCCAATGCCGCCGGCAATTGA
GAAGCCCAGTCCCTTGCCGCCCTTGACCAGATCGATTTCGATGACCTTCG
GTCCGCTGGCCGCACTATCCCGAGCATCTCCTGCCGCCGATCCCGCTGCC
GGGGTGGTGGCCGTTCCACGTTTTCGCTTCACATGCAGCTTAACAACATT
GCCCGCCTTCTTGAGGGCATCCACGGCGGAGGCATGTGGCACATCCACCA
CGGACACATCGTTCACCGATACGATGATATCGTTGATGCTCAGACGTCCA
TCGGCGGCAGCTGCTCCACCGGAAATGAGCTTGGTGATGTAGATGGAGGT
GTCGGTGCCGATGTGCGGATTATCCGTACCGCCGGCAATGGAAAAGCCCA
ATCCGGAGTTGCCGCGCTCCAGCTGAATGTCCTCGTATAACCAGCTATCA
T

BS07267.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG1725-PF 2451 dlg1-RF 1517..2451 951..17 4675 100 Minus
CG1725-PG 2928 dlg1-RG 98..889 951..160 3960 100 Minus
CG1725-PH 2736 dlg1-RH 449..1240 951..160 3960 100 Minus
CG1725-PB 2913 dlg1-RB 626..1417 951..160 3960 100 Minus
CG1725-PE 2883 dlg1-RE 98..889 951..160 3960 100 Minus
CG1725-PD 2883 dlg1-RD 98..889 951..160 3960 100 Minus
CG1725-PA 2907 dlg1-RA 122..913 951..160 3960 100 Minus
CG1725-PG 2928 dlg1-RG 2252..2296 159..115 225 100 Minus
CG1725-PH 2736 dlg1-RH 2060..2104 159..115 225 100 Minus
CG1725-PB 2913 dlg1-RB 2237..2281 159..115 225 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
dlg1-RF 2554 CG1725-RF 1563..2498 951..16 4680 100 Minus
dlg1-RT 6815 CG536-RT 507..1298 951..160 3960 100 Minus
dlg1-RS 5380 CG536-RS 435..1226 951..160 3960 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:57:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11395250..11395791 951..410 2710 100 Minus
X 23542271 X 11395853..11396103 410..160 1255 100 Minus
X 23542271 X 11402705..11402805 116..16 505 100 Minus
X 23542271 X 11400786..11400833 161..114 240 100 Minus
Blast to na_te.dros performed on 2015-02-06 11:57:19 has no hits.

BS07267.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:07:41 Download gff for BS07267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1725-PF 1517..2451 17..951 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:55:59 Download gff for BS07267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1725-PF 1517..2451 17..951 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:39:45 Download gff for BS07267.3prime
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 1563..2498 16..951 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:48:36 Download gff for BS07267.3prime
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 1563..2498 16..951 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:48:36 Download gff for BS07267.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11395250..11395791 410..951 100 -> Minus
X 11395854..11396103 160..409 100 -> Minus
X 11400788..11400832 115..159 100 -> Minus
X 11402707..11402805 16..114 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:39:45 Download gff for BS07267.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11289283..11289824 410..951 100 -> Minus
arm_X 11289887..11290136 160..409 100 -> Minus
arm_X 11294821..11294865 115..159 100 -> Minus
arm_X 11296740..11296838 16..114 100   Minus

BS07267.5prime Sequence

911 bp (753 high quality bases) assembled on 2006-01-06

> BS07267.5prime
GAAGTTATCAGTCGACATGGATTCGGATACGGACTCGGAGCGGGAGAAGA
GCAGCGATCCCAACGAGGGACTGCTCAGTAGCGATGACAAGACATTCCAC
GACGATGATGAACCGGCGGAGGATTCCTCTCCGGCGGACGATGAGGAGGA
GCCCGAGGAGGAGGAGTGCCTGCTGCCGCAGAAGAAGGCACAGATTCGCT
GCGACCAAGACCAGCCACCTTTGGTGGTCTTGGTACAGCCGTCGGCGGAA
GCCATAGAAGTGCGCCAAGAAATCGATGATACCAATCCGGTGGCAGTAGC
TGCCAAAGCTAGCGATATGGATGGGGATTCGCAACTGGAGGTGATGGAAC
ACCAAATGGAGACCGTAACCGAACCGGATCCCGAGCCTCCGAAGTGTCCA
ACATCCCTGCGCGATAGTGTCCGCGAGTCCGTTGAATGCTTCTATTCCGC
CCAGGATCTTCTCGAGTACGGACACATGCTGTCCTCCACTTCGATGGTCC
GAACACCGGATGTGGAGTCTGGCTACTTTGAGAAGTCCGAGAGCGATGCT
TCGCGCGACGAGTGGGAGGGTCCGTCGTCGTCATCCTCGGGCGCAGCCCG
TTGTCGCCTTCTCTCCGGCATTTCCGGACTCTCCGTCTCTTCGTCGAGTC
GCCACAGTGCCGAGGGTTTGCGCATGGAACTGAGCCGATTTCGCACCATG
ATCGAGACTCTCGAGCGGGAAAGTCTCGAGAAATCGCAATCGGAGCTGCA
GTTGAAGGCCAAGAGCAAGGCGAAGCCAAAGCCCAAGCAGAGATCCCACG
TACAGGATGCGGCTGGGGAAAGTGGTTCGGAACAGGGTTCCGAGAGGGGC
TTCTGGTCAACGATCTTCGGCCAGGCGGGTCTGGCGATCAGTCAGGATGA
AGAGGAGCGCA

BS07267.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG1725-PF 2451 dlg1-RF 1..895 17..911 4450 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 10:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
dlg1-RM 3196 CG1725-RM 47..941 17..911 4460 99.9 Plus
dlg1-RF 2554 CG1725-RF 47..941 17..911 4460 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 10:46:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11375809..11376703 17..911 4460 99.9 Plus
Blast to na_te.dros performed on 2015-02-02 10:46:15 has no hits.

BS07267.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:07:42 Download gff for BS07267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1725-PF 1..894 17..910 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:56:00 Download gff for BS07267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1725-PF 1..894 17..910 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:32:47 Download gff for BS07267.5prime
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 44..940 11..910 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:41:52 Download gff for BS07267.5prime
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 44..940 11..910 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:41:52 Download gff for BS07267.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11375806..11376702 11..910 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:32:47 Download gff for BS07267.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11269839..11270735 11..910 99   Plus

BS07267.complete Sequence

2483 bp assembled on 2008-01-02

GenBank Submission: FJ635795

> BS07267.complete
GAAGTTATCAGTCGACATGGATTCGGATACGGACTCGGAGCGGGAGAAGA
GCAGCGATCCCAACGAGGGACTGCTCAGTAGCGATGACAAGACATTCCAC
GACGATGATGAACCGGCGGAGGATTCCTCTCCGGCGGACGATGAGGAGGA
GCCCGAGGAGGAGGAGTGCCTGCTGCCGCAGAAGAAGGCACAGATTCGCT
GCGACCAAGACCAGCCACCTTTGGTGGTCTTGGTACAGCCGTCGGCGGAA
GCCATAGAAGTGCGCCAAGAAATCGATGATACCAATCCGGTGGCAGTAGC
TGCCAAAGCTAGCGATATGGATGGGGATTCGCAACTGGAGGTGATGGAAC
ACCAAATGGAGACCGTAACCGAACCGGATCCCGAGCCTCCGAAGTGTCCA
ACATCCCTGCGCGATAGTGTCCGCGAGTCCGTTGAATGCTTCTATTCCGC
CCAGGATCTTCTCGAGTACGGACACATGCTGTCCTCCACTTCGATGGTCC
GAACACCGGATGTGGAGTCTGGCTACTTTGAGAAGTCCGAGAGCGATGCT
TCGCGCGACGAGTGGGAGGGTCCGTCGTCGTCATCCTCGGGCGCAGCCCG
TTGTCGCCTTCTCTCCGGCATTTCCGGACTCTCCGTCTCTTCGTCGAGTC
GCCACAGTGCCGAGGGTTTGCGCATGGAACTGAGCCGATTTCGCACCATG
ATCGAGACTCTCGAGCGGGAAAGTCTCGAGAAATCGCAATCGGAGCTGCA
GTTGAAGGCCAAGAGCAAGGCGAAGCCAAAGCCCAAGCAGAGATCCCACG
TACAGGATGCGGCTGGGGAAAGTGGTTCGGAACAGGGTTCCGAGAGGGGC
TTCTGGTCAACGATCTTCGGCCAGGCGGGTCTGGCGATCAGTCAGGATGA
GGAGGAGCGCATTGCGGACATACAGAAAGCTCATCGGGCTCTCGAGCTGC
TCGAGGACTACCACGCGAGACTTTCGGAGCCGCAGGATCGGGCGCTGCGT
ATTGCAATCGAACGCGTTATACGCATATTTAAATCTCGCTTGTTTCAAGC
GCTGTTAGATATACAAGAATTCTATGAATTGACATTATTGGATGACTCGA
AGAGCATACAACAAAAGACAGCGGAGACCTTGCAAATTGCAACCAAATGG
GAAAAGGATGGCCAGGCAGTCAAAATAGCTGATTTTATCAAATCTTCAAA
CCTCAATCGCAATTGCGCCTATGAGTTTAACAACGACGCCTCATCCAATC
AAACCAACCAATCAGCACTCAATCAGAATCCGATCGCGAATAATGTGAGT
GCCCAAGCGCAGGCCGAGGCCCTCAGCAGAACATTTAAGAGTGAATTGGA
AGAGATCTTGAATCAGCGCATGCGCATCGAATCGGACACGGAAAATGCCA
AGGAGCCAACTGTCGAGCAGCAGCAAAAGCAGCAGCAAGCGCAGCAGCGC
AGTTCCCGCTCCCCGCAGCAGCAGAATCCGCAGCAGCAGCAGGGATCCAA
ATCGAGGAGCGGGTCCCAGACTGTGAATGGCGATGATAGCTGGTTATACG
AGGACATTCAGCTGGAGCGCGGCAACTCCGGATTGGGCTTTTCCATTGCC
GGCGGTACGGATAATCCGCACATCGGCACCGACACCTCCATCTACATCAC
CAAGCTCATTTCCGGTGGAGCAGCTGCCGCCGATGGACGTCTGAGCATCA
ACGATATCATCGTATCGGTGAACGATGTGTCCGTGGTGGATGTGCCACAT
GCCTCCGCCGTGGATGCCCTCAAGAAGGCGGGCAATGTTGTTAAGCTGCA
TGTGAAGCGAAAACGTGGAACGGCCACCACCCCGGCAGCGGGATCGGCGG
CAGGAGATGCTCGGGATAGTGCGGCCAGCGGACCGAAGGTCATCGAAATC
GATCTGGTCAAGGGCGGCAAGGGACTGGGCTTCTCAATTGCCGGCGGCAT
TGGCAACCAGCACATCCCCGGCGACAATGGCATCTATGTGACCAAGTTGA
TGGACGGCGGAGCAGCGCAGGTGGACGGACGTCTCTCCATCGGAGATAAG
CTGATTGCAGTGCGCACCAACGGGAGCGAGAAGAACCTGGAGAACGTAAC
GCACGAACTGGCGGTGGCCACGTTGAAATCGATCACCGACAAGGTGACGC
TGATCATTGGAAAGACACAGCATCTGACCACCAGTGCGTCCGGCGGCGGA
GGAGGAGGCCTTTCATCCGGACAACAATTGTCGCAGTCCCAATCGCAGTT
GGCCACCAGCCAGAGCCAAAGTCAGGTGCATCAGCAGCAGCATGCGACGC
CGATGGTCAATTCGCAGTCGACAGCCTTTATGCTTTGCTACACACAAGAC
GATGCCAATGCTGAAGGAGGCGAGATTATCTACAGGGTGGAGTTACCCGA
TATGGAGCAGATAACTCTGATCTACTTGGAGAATAATGATGCTGACTATC
GTAAGTCGAGCATCTGAAAGCTTTCTAGACCAT

BS07267.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:59:40
Subject Length Description Subject Range Query Range Score Percent Strand
dlg1-RF 2451 CG1725-PF 1..2451 17..2467 12255 100 Plus
dlg1-RB 2913 CG1725-PB 20..1417 927..2324 6990 100 Plus
dlg1-RM 3093 CG1725-PM 1..1167 17..1183 5835 100 Plus
dlg1-RB 2913 CG1725-PB 2237..2281 2325..2369 225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:59:42
Subject Length Description Subject Range Query Range Score Percent Strand
dlg1-RF 2554 CG1725-RF 47..2498 17..2468 12260 100 Plus
dlg1-RB 5296 CG1725-RB 830..2227 927..2324 6990 100 Plus
dlg1-RM 3196 CG1725-RM 47..1213 17..1183 5835 100 Plus
dlg1-RB 5296 CG1725-RB 3047..3091 2325..2369 225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11375809..11376718 17..926 4550 100 Plus
X 23542271 X 11395240..11395791 1523..2074 2760 100 Plus
X 23542271 X 11395853..11396103 2074..2324 1255 100 Plus
X 23542271 X 11382936..11383112 1184..1360 885 100 Plus
X 23542271 X 11387771..11387935 1360..1524 825 100 Plus
X 23542271 X 11376842..11376973 927..1058 660 100 Plus
X 23542271 X 11381854..11381980 1057..1183 635 100 Plus
X 23542271 X 11402705..11402805 2368..2468 505 100 Plus
X 23542271 X 11400786..11400833 2323..2370 240 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:59:39 has no hits.

BS07267.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:07:08 Download gff for BS07267.complete
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 1..2451 17..2467 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:33:15 Download gff for BS07267.complete
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 47..2496 17..2466 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:08 Download gff for BS07267.complete
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 47..2496 17..2466 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:07:09 Download gff for BS07267.complete
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 44..2498 11..2468 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:01:54 Download gff for BS07267.complete
Subject Subject Range Query Range Percent Splice Strand
dlg1-RF 47..2496 17..2466 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:01:54 Download gff for BS07267.complete
Subject Subject Range Query Range Percent Splice Strand
X 11387772..11387933 1361..1522 100 -> Plus
X 11375809..11376718 17..926 100 -> Plus
X 11376842..11376973 927..1058 100 -> Plus
X 11381856..11381980 1059..1183 100 -> Plus
X 11382936..11383112 1184..1360 100 -> Plus
X 11395240..11395791 1523..2074 100 -> Plus
X 11395854..11396103 2075..2324 100 -> Plus
X 11400788..11400832 2325..2369 100 -> Plus
X 11402707..11402803 2370..2466 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:08 Download gff for BS07267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11294821..11294865 2325..2369 100 -> Plus
arm_X 11296740..11296836 2370..2466 100   Plus
arm_X 11269842..11270751 17..926 100 -> Plus
arm_X 11270875..11271006 927..1058 100 -> Plus
arm_X 11275889..11276013 1059..1183 100 -> Plus
arm_X 11276969..11277145 1184..1360 100 -> Plus
arm_X 11281805..11281966 1361..1522 100 -> Plus
arm_X 11289273..11289824 1523..2074 100 -> Plus
arm_X 11289887..11290136 2075..2324 100 -> Plus

BS07267.pep Sequence

Translation from 16 to 2466

> BS07267.pep
MDSDTDSEREKSSDPNEGLLSSDDKTFHDDDEPAEDSSPADDEEEPEEEE
CLLPQKKAQIRCDQDQPPLVVLVQPSAEAIEVRQEIDDTNPVAVAAKASD
MDGDSQLEVMEHQMETVTEPDPEPPKCPTSLRDSVRESVECFYSAQDLLE
YGHMLSSTSMVRTPDVESGYFEKSESDASRDEWEGPSSSSSGAARCRLLS
GISGLSVSSSSRHSAEGLRMELSRFRTMIETLERESLEKSQSELQLKAKS
KAKPKPKQRSHVQDAAGESGSEQGSERGFWSTIFGQAGLAISQDEEERIA
DIQKAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQ
EFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADFIKSSNLNRNC
AYEFNNDASSNQTNQSALNQNPIANNVSAQAQAEALSRTFKSELEEILNQ
RMRIESDTENAKEPTVEQQQKQQQAQQRSSRSPQQQNPQQQQGSKSRSGS
QTVNGDDSWLYEDIQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISG
GAAAADGRLSINDIIVSVNDVSVVDVPHASAVDALKKAGNVVKLHVKRKR
GTATTPAAGSAAGDARDSAASGPKVIEIDLVKGGKGLGFSIAGGIGNQHI
PGDNGIYVTKLMDGGAAQVDGRLSIGDKLIAVRTNGSEKNLENVTHELAV
ATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQS
QSQVHQQQHATPMVNSQSTAFMLCYTQDDANAEGGEIIYRVELPDMEQIT
LIYLENNDADYRKSSI*

BS07267.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
dlg1-PF 816 CG1725-PF 1..816 1..816 4111 100 Plus
dlg1-PM 1030 CG1725-PM 1..710 1..769 3370 89.6 Plus
dlg1-PB 970 CG1725-PB 6..472 303..769 2324 99.8 Plus
dlg1-PH 911 CG1725-PH 6..413 303..769 1751 80.5 Plus
dlg1-PL 946 CG1725-PL 6..421 303..769 1732 79.2 Plus
dlg1-PM 1030 CG1725-PM 690..1030 470..816 320 30.5 Plus