Clone BS07284 Report

Search the DGRC for BS07284

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:72
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptMocs2-RA
Protein status:BS07284.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07284.3prime Sequence

925 bp (876 high quality bases) assembled on 2006-01-06

> BS07284.3prime
ATGGTCTAGAAAGCTTTTAGCTTAATTCGCTGCCATCCTTAATCTTTTGA
ATGAATGCACTTAATTCTTGCGCCGAATACGATTTCTTTCGGCTCTTCTT
CGGCGGCGCGGCTTCCATAGATGACGGTTCACGTTTGGTGAAGTGTCTGT
ACTCGGGCGAAATGGACTCCAGTTGCAGCAGTCTATTTTCCACTCGTTTG
ATTCTACTGAAAATGTTTTCCTCGTTGTCGGTGGTTAGACCCATGTACGA
TTCAATTGCCTGTAGTCGTGAATTGGGTAGCGATTTCCTCATTTCTTTGG
TTGGATCCGTTTGACCGTCACGCGATCCCATTAGTTTATTCAGTTCGAGT
TCGTAGTTGGGTCGCATTTCCATTTGCTGAGGTCCGCATCGGTTGTTTAC
TCGTCGGACTTTTAAATGGCAATTTGACTGCTCCTGCTTAATAATTGTGC
TCTGCGTTCGAGCGCAGGAATCGCTCAAGTTTTGGTCTGAGCTGACAAAA
GACGATTTGAAGTCAATTACATTTTGTGAGTTTATTTCGTCTCGTTTTCT
GTTGACAAAACATTCTAAACGCTTGGTTAACTCAGCGTCATTAACTCTAA
TTTGCACCAGAGTTCGCGGGACGTCATGTGACTCCTCAACTTTGCAGGGA
CAAGCGGCGTAGTTGAAGCCACTTTTCGATTTCTTAGGCCTGATGGACTC
CTTGTTCTCCTTCCATTCGCTGTCGTTATCGCCGTCGTAGATTTCCTTTT
TCCAGATGGGAACCCGAGTTTTTAGCTGGTCTATTGCAAAAGATACTGAT
TCTAAGGCCTCAGAACGATGTGGTGACGAGGCGGCTATAACTACACTGGC
TTCGCATACGGGCACTGTTCCCAATCGATGATATATGACTATGTGCTTCA
GATCGAGCCACTTAAATCGGAGATC

BS07284.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10238-PA 1104 CG10238-RA 196..1104 925..17 4520 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:24:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG42503-RA 1420 CG42503-RA 492..1400 925..17 4530 99.9 Minus
Mocs2-RA 1420 CG10238-RA 492..1400 925..17 4530 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:24:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25126167..25126442 409..684 1380 100 Plus
3R 32079331 3R 25125834..25126104 140..410 1355 100 Plus
3R 32079331 3R 25126567..25126807 685..925 1190 99.6 Plus
3R 32079331 3R 25125652..25125774 17..139 615 100 Plus
Y 3667352 Y 3024146..3024268 17..139 570 97.6 Plus
Y 3667352 Y 3024314..3024414 140..241 445 98 Plus
Blast to na_te.dros performed on 2015-02-10 21:24:43 has no hits.

BS07284.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:12 Download gff for BS07284.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10238-PA 196..1104 17..925 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:56:38 Download gff for BS07284.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10238-PA 196..1104 17..925 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:37:51 Download gff for BS07284.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42503-RA 492..1400 17..925 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:23 Download gff for BS07284.3prime
Subject Subject Range Query Range Percent Splice Strand
Mocs2-RA 492..1400 17..925 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:23 Download gff for BS07284.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25125652..25125774 17..139 100 <- Plus
3R 25125834..25126102 140..408 100 <- Plus
3R 25126167..25126442 409..684 100 <- Plus
3R 25126567..25126807 685..925 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:37:51 Download gff for BS07284.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20951374..20951496 17..139 100 <- Plus
arm_3R 20951556..20951824 140..408 100 <- Plus
arm_3R 20951889..20952164 409..684 100 <- Plus
arm_3R 20952289..20952529 685..925 99   Plus

BS07284.5prime Sequence

903 bp (839 high quality bases) assembled on 2006-01-06

> BS07284.5prime
GAAGTTATCAGTCGACATGGATCACGTGAAATTGGTAAACGACCCCATAG
ATATCGCTCATATCCATCAGTTGCTGGCCGATGAAGGCTGTGGAGCCTCA
TCCGTTTTCGTGGGCACTACGCGCGATAATTTTCAAGGGAAAAAGGTGCT
GTCATTGGCGTACGAGGCCTACGATAGCATGGCACTCAAGGAAATGAATA
AAATATGCTCAGATCTCCGATCTAAGTGGCTCGATCTGAAGCACATAGTC
ATATATCATCGATTGGGAACAGTGCCCGTATGCGAAGCCAGTGTAGTTAT
AGCCGCCTCGTCACCACATCGTTCTGAGGCCTTAGAATCAGTATCTTTTG
CAATAGACCAGCTAAAAACTCGGGTTCCCATCTGGAAAAAGGAAATCTAC
GACGGCGATAACGACAGCGAATGGAAGGAGAACAAGGAGTCCATCAGGCC
TAAGAAATCGAAAAGTGGCTTCAACTACGCCGCTTGTCCCTGCAAAGTTG
AGGAGTCACATGACGTCCCGCGAACTCTGGTGCAAATTAGAGTTAATGAC
GCTGAGTTAACCAAGCGTTTAGAATGTTTTGTCAACAGAAAACGAGACGA
AATAAACTCACAAAATGTAATTGACTTCAAATCGTCTTTTGTCAGCTCAG
ACCAAAACTTGAGCGATTCCTGCGCTCGAACGCAGAGCACAATTATTAAG
CAGGAGCAGTCAAATTGCCATTTAAAAGTCCGACGAGTAAACAACCGATG
CGGACCTCAGCAAATGGAAATGCGACCCAACTACGAACTCGAACTGAATA
AACTAATGGGATCGCGTGACGGTCAAACGGATCCAACCAAAGAAATGAGG
AAATCGCTACCCAATTCACGACTACAGGCAATTGAATCGTACATGGGTCT
AAC

BS07284.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10238-PA 1104 CG10238-RA 1..887 17..903 4435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:53:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG42503-RA 1420 CG42503-RA 296..1183 16..903 4440 100 Plus
Mocs2-RA 1420 CG10238-RA 296..1183 16..903 4440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:53:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25126567..25126875 452..144 1545 100 Minus
3R 32079331 3R 25126167..25126442 728..453 1380 100 Minus
3R 32079331 3R 25125928..25126104 903..727 885 100 Minus
3R 32079331 3R 25126932..25127064 148..16 665 100 Minus
Blast to na_te.dros performed on 2015-02-04 01:53:32 has no hits.

BS07284.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:13 Download gff for BS07284.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10238-PA 1..887 17..903 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:56:39 Download gff for BS07284.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10238-PA 1..887 17..903 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:45:23 Download gff for BS07284.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42503-RA 291..1183 8..903 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:32:43 Download gff for BS07284.5prime
Subject Subject Range Query Range Percent Splice Strand
Mocs2-RA 291..1183 8..903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:32:43 Download gff for BS07284.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25125928..25126102 729..903 100 <- Minus
3R 25126167..25126442 453..728 100 <- Minus
3R 25126567..25126873 146..452 100 <- Minus
3R 25126935..25127069 8..145 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:45:23 Download gff for BS07284.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20951650..20951824 729..903 100 <- Minus
arm_3R 20951889..20952164 453..728 100 <- Minus
arm_3R 20952289..20952595 146..452 100 <- Minus
arm_3R 20952657..20952791 8..145 97   Minus

BS07284.complete Sequence

1136 bp (1136 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635802

> BS07284.complete
GAAGTTATCAGTCGACATGGATCACGTGAAATTGGTAAACGACCCCATAG
ATATCGCTCATATCCATCAGTTGCTGGCCGATGAAGGCTGTGGAGCCTCA
TCCGTTTTCGTGGGCACTACGCGCGATAATTTTCAAGGGAAAAAGGTGCT
GTCATTGGCGTACGAGGCCTACGATAGCATGGCACTCAAGGAAATGAATA
AAATATGCTCAGATCTCCGATCTAAGTGGCTCGATCTGAAGCACATAGTC
ATATATCATCGATTGGGAACAGTGCCCGTATGCGAAGCCAGTGTAGTTAT
AGCCGCCTCGTCACCACATCGTTCTGAGGCCTTAGAATCAGTATCTTTTG
CAATAGACCAGCTAAAAACTCGGGTTCCCATCTGGAAAAAGGAAATCTAC
GACGGCGATAACGACAGCGAATGGAAGGAGAACAAGGAGTCCATCAGGCC
TAAGAAATCGAAAAGTGGCTTCAACTACGCCGCTTGTCCCTGCAAAGTTG
AGGAGTCACATGACGTCCCGCGAACTCTGGTGCAAATTAGAGTTAATGAC
GCTGAGTTAACCAAGCGTTTAGAATGTTTTGTCAACAGAAAACGAGACGA
AATAAACTCACAAAATGTAATTGACTTCAAATCGTCTTTTGTCAGCTCAG
ACCAAAACTTGAGCGATTCCTGCGCTCGAACGCAGAGCACAATTATTAAG
CAGGAGCAGTCAAATTGCCATTTAAAAGTCCGACGAGTAAACAACCGATG
CGGACCTCAGCAAATGGAAATGCGACCCAACTACGAACTCGAACTGAATA
AACTAATGGGATCGCGTGACGGTCAAACGGATCCAACCAAAGAAATGAGG
AAATCGCTACCCAATTCACGACTACAGGCAATTGAATCGTACATGGGTCT
AACCACCGACAACGAGGAAAACATTTTCAGTAGAATCAAACGAGTGGAAA
ATAGACTGCTGCAACTGGAGTCCATTTCGCCCGAGTACAGACACTTCACC
AAACGTGAACCGTCATCTATGGAAGCCGCGCCGCCGAAGAAGAGCCGAAA
GAAATCGTATTCGGCGCAAGAATTAAGTGCATTCATTCAAAAGATTAAGG
ATGGCAGCGAATTAAGCTAAAAGCTTTCTAGACCAT

BS07284.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
Mocs2-RA 1104 CG10238-PA 1..1104 17..1120 5520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG42503-RA 1420 CG42503-RA 296..1400 16..1120 5525 100 Plus
Mocs2-RA 1420 CG10238-RA 296..1400 16..1120 5525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25126567..25126875 452..144 1545 100 Minus
3R 32079331 3R 25126167..25126442 728..453 1380 100 Minus
3R 32079331 3R 25125834..25126104 997..727 1355 100 Minus
3R 32079331 3R 25126932..25127064 148..16 665 100 Minus
3R 32079331 3R 25125652..25125774 1120..998 615 100 Minus
Y 3667352 Y 3024146..3024268 1120..998 570 97.6 Minus
Y 3667352 Y 3024314..3024414 997..896 445 98 Minus
Blast to na_te.dros performed on 2014-11-26 14:54:12 has no hits.

BS07284.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:38 Download gff for BS07284.complete
Subject Subject Range Query Range Percent Splice Strand
CG10238-RA 1..1104 17..1120 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:47:55 Download gff for BS07284.complete
Subject Subject Range Query Range Percent Splice Strand
CG10238-RA 278..1387 8..1120 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:11 Download gff for BS07284.complete
Subject Subject Range Query Range Percent Splice Strand
CG42503-RA 297..1398 17..1118 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:38 Download gff for BS07284.complete
Subject Subject Range Query Range Percent Splice Strand
CG10238-RA 278..1387 8..1120 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:27 Download gff for BS07284.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs2-RA 297..1398 17..1118 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:27 Download gff for BS07284.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25126935..25127063 17..145 100   Minus
3R 25126567..25126873 146..452 100 <- Minus
3R 25125834..25126102 729..997 100 <- Minus
3R 25126167..25126442 453..728 100 <- Minus
3R 25125654..25125774 998..1118 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:11 Download gff for BS07284.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20951376..20951496 998..1118 100 <- Minus
arm_3R 20951556..20951824 729..997 100 <- Minus
arm_3R 20951889..20952164 453..728 100 <- Minus
arm_3R 20952289..20952595 146..452 100 <- Minus
arm_3R 20952657..20952785 17..145 100   Minus

BS07284.pep Sequence

Translation from 16 to 1119

> BS07284.pep
MDHVKLVNDPIDIAHIHQLLADEGCGASSVFVGTTRDNFQGKKVLSLAYE
AYDSMALKEMNKICSDLRSKWLDLKHIVIYHRLGTVPVCEASVVIAASSP
HRSEALESVSFAIDQLKTRVPIWKKEIYDGDNDSEWKENKESIRPKKSKS
GFNYAACPCKVEESHDVPRTLVQIRVNDAELTKRLECFVNRKRDEINSQN
VIDFKSSFVSSDQNLSDSCARTQSTIIKQEQSNCHLKVRRVNNRCGPQQM
EMRPNYELELNKLMGSRDGQTDPTKEMRKSLPNSRLQAIESYMGLTTDNE
ENIFSRIKRVENRLLQLESISPEYRHFTKREPSSMEAAPPKKSRKKSYSA
QELSAFIQKIKDGSELS*

BS07284.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
Mocs2-PA 367 CG10238-PA 1..367 1..367 1895 100 Plus