Clone BS07286 Report

Search the DGRC for BS07286

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:72
Well:86
Vector:pDNR-Dual
Associated Gene/Transcriptjbug-RK
Protein status:BS07286.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07286.3prime Sequence

907 bp (785 high quality bases) assembled on 2006-01-06

> BS07286.3prime
ATGGTCTAGAAAGCTTCTAGTACAAAAGATTTCGCCGTCCTTCCACGTTC
ACCTCGATGTCTTCCAAACGGCCGCCATTGTGATTGATTACAAAAGAATT
GGTCTGATGCACGGGTCCTGGGCCACCCAGGGACACCTGGGGCCCGGCCA
CGCCCCCACTGATGCTAACCGTAATCGGACAGCCGGGAACGGGCATTTTG
TTGAATGACACGTTGATCGTGTGCTCGCACGACTCTGTGGGCACAAACGA
AACCGAAAATCTTGCACTGCCTTGCGGATGCACCTGCGTGGGAATGTTCT
GTCCCTTGGCCGAAATCGTTATCTCCAGGTTGCCCTCACCGGCATCGCCC
GCATCCACGGTGAACTGCACCGGGCGTCCCATGGTTCCCCGCGAGACACT
GCCCACCACCACCTTGCTGGCATCGTATGACTTGGCCAGGAAGGGGGTTC
CCTGCACGGCGAATCCGTTGTACTCCACATTGATCGAGTGGCCGCCAACG
GTGGTGGGCGTAAACTCGGCCGTGAAGCCAGCGTGGATATCTCCGGTCAC
CCGGACAGGCAACTCGCCCTGGGGACCGCGCACGCTGACAGCCAGCTCGG
CAGCTCCACCTCCGCTCACGGTGATGTGAAAGGAGGAGGGCCGGTTGACT
GGGATTAGCTCCAGATTGGAGAGATTCAGGAGCACTCGCGAGGTGTCCGC
CACGGCGCAGACAAAGGGACAGCCGCGCACCGTTTCGCCATTGAATTTGA
TGTCAATCAGATGCGACTTGGCCTGCTCCGGCGTGAAGGAGACCAGGCAG
CGACCACCGCCCACCACCTGGACATGATTGGGCACCTCGCCCTCGTTGAT
GGATATCTCCAGCTGGCCCTCGCCCGCGGCGCTGGCATCTACGCGGAACT
GGCACGC

BS07286.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG30092-PB 4869 jbug-RB 3979..4869 907..17 4430 99.8 Minus
CG30092-PC 1233 jbug-RC 343..1233 907..17 4430 99.8 Minus
CG30092-PD 8895 jbug-RD 3979..4849 907..37 4330 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
jbug-RK 1908 CG30092-RK 725..1617 907..15 4450 99.9 Minus
jbug-RJ 2146 CG30092-RJ 963..1855 907..15 4450 99.9 Minus
jbug-RH 1845 CG30092-RH 662..1554 907..15 4450 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22724531..22725177 261..907 3220 99.8 Plus
2R 25286936 2R 22723936..22724159 39..262 1120 100 Plus
Blast to na_te.dros performed on 2015-02-06 11:56:39 has no hits.

BS07286.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:16 Download gff for BS07286.3prime
Subject Subject Range Query Range Percent Splice Strand
jbug-PB 3979..4869 17..907 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:56:43 Download gff for BS07286.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30092-PC 343..1233 17..907 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:39:40 Download gff for BS07286.3prime
Subject Subject Range Query Range Percent Splice Strand
jbug-RH 662..1560 7..907 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:48:31 Download gff for BS07286.3prime
Subject Subject Range Query Range Percent Splice Strand
jbug-RH 662..1560 7..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:48:31 Download gff for BS07286.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22723937..22724157 40..260 100 <- Plus
2R 22724531..22725177 261..907 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:39:40 Download gff for BS07286.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18611442..18611662 40..260 100 <- Plus
arm_2R 18612036..18612682 261..907 99   Plus

BS07286.5prime Sequence

909 bp (792 high quality bases) assembled on 2006-01-06

> BS07286.5prime
GAAGTTATCAGTCGACATGGGAAGTCCCTTAACCAGTCCCGTTAGTAAGA
ATGGTTACGAGTCGTCACGTACCGTAGAAAAGTCATCGACCTACAAGTCC
ACCTCGAACTACGTCACCGATTCGAATATTCGTGCCAGTCCCTCGCTTTA
CGGAACTGCCGAGCGACTGCGTCGAACCGGATCCCCCGAGCCCCGCATCG
ACCATTCCTCCAATGTGAGGGTGTCCTCGATGAAGCCGGCTTCCGCCAGG
CGGGACAGCTGGGACGTCATCAACAAGACGAAGCACATGCTCTCGCACAA
TTCGCTCGAATCGCTGGCGAACATGACCGAGAAGCAGCTGAACACGGAAC
TGCAATACAATCGCCCGGATTTGGACCACGAGACGCACCGGAACACCCAA
TACAACAAGTTCGCCCTGCACAAGCAGCAGCAGCAGCAGTCGGACTATCG
CCGGGATTCCCCCGATGATGGAGAGCGCTACAAACCCAGTGCCATTACAG
TCAAGTCACATTCGAACAATACGTATACGGACAAGTCCGGTGGATATACG
AAAACCGTTAAGGAATCCAGCGAGCATGTGGTTACCGAGAGCAATGGCCA
TGGCCCCTCCCCGGGCTATGGATACAGCTCCCTCTCCAGATTTCGACCCA
TAGACGGCAATGCCACTGGTGCCAGGGCCATTCGAGTGCAGGATATTCCG
AATGGCTCTATTGGACGGCCTGTCGAGTTCGAGATCGATGGCTCGAGGGC
GGGCTCCGGCAATTTGGAGATCCTGGTCAACGGCGGGCGTGTCACCTCCT
CGGTGCGCTCGCTGGGAGGTCAGAGGTTCATAGCCAGCTTCACGCCGCAC
GAACATGGAACGCACACGGTGCAGATCACCTTCAATGGCGAAACAGTTCC
AGGTTCACC

BS07286.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG30092-PD 8895 jbug-RD 2727..3620 16..909 4470 100 Plus
CG30092-PB 4869 jbug-RB 2727..3620 16..909 4470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:23:09
Subject Length Description Subject Range Query Range Score Percent Strand
jbug-RN 9391 CG30092-RN 2865..3758 16..909 4470 100 Plus
jbug-RM 9043 CG30092-RM 2517..3410 16..909 4470 100 Plus
jbug-RF 9430 CG30092-RF 2904..3797 16..909 4470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:23:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22730310..22730745 483..48 2180 100 Minus
2R 25286936 2R 22729813..22730233 904..484 2105 100 Minus
Blast to na_te.dros performed on 2015-02-12 04:23:08 has no hits.

BS07286.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:17 Download gff for BS07286.5prime
Subject Subject Range Query Range Percent Splice Strand
jbug-PB 2721..3620 8..909 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:56:45 Download gff for BS07286.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30092-PB 2721..3620 8..909 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:04:04 Download gff for BS07286.5prime
Subject Subject Range Query Range Percent Splice Strand
jbug-RF 2898..3797 8..909 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:07:43 Download gff for BS07286.5prime
Subject Subject Range Query Range Percent Splice Strand
jbug-RF 2898..3797 8..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:07:43 Download gff for BS07286.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22729809..22730233 484..909 99 <- Minus
2R 22730310..22730743 50..483 100 <- Minus
2R 22730815..22730854 8..49 92   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:04:04 Download gff for BS07286.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18617314..18617738 484..909 99 <- Minus
arm_2R 18617815..18618248 50..483 100 <- Minus
arm_2R 18618320..18618359 8..49 92   Minus

BS07286.complete Sequence

2174 bp assembled on 2008-01-02

GenBank Submission: FJ635804

> BS07286.complete
GAAGTTATCAGTCGACATGGGAAGTCCCTTAACCAGTCCCGTTAGTAAGA
ATGGTTACGAGTCGTCACGTACCGTAGAAAAGTCATCGACCTACAAGTCC
ACCTCGAACTACGTCACCGATTCGAATATTCGTGCCAGTCCCTCGCTTTA
CGGAACTGCCGAGCGACTGCGTCGAACCGGATCCCCCGAGCCCCGCATCG
ACCATTCCTCCAATGTGAGGGTGTCCTCGATGAAGCCGGCTTCCGCCAGG
CGGGACAGCTGGGACGTCATCAACAAGACGAAGCACATGCTCTCGCACAA
TTCGCTCGAATCGCTGGCGAACATGACCGAGAAGCAGCTGAACACGGAAC
TGCAATACAATCGCCCGGATTTGGACCACGAGACGCACCGGAACACCCAA
TACAACAAGTTCGCCCTGCACAAGCAGCAGCAGCAGCAGTCGGACTATCG
CCGGGATTCCCCCGATGATGGAGAGCGCTACAAACCCAGTGCCATTACAG
TCAAGTCACATTCGAACAATACGTATACGGACAAGTCCGGTGGATATACG
AAAACCGTTAAGGAATCCAGCGAGCATGTGGTTACCGAGAGCAATGGCCA
TGGCCCCTCCCCGGGCTATGGATACAGCTCCCTCTCCAGATTTCGACCCA
TAGACGGCAATGCCACTGGTGCCAGGGCCATTCGAGTGCAGGATATTCCG
AATGGCTCTATTGGACGGCCTGTCGAGTTCGAGATCGATGGCTCGAGGGC
GGGCTCCGGCAATTTGGAGATCCTGGTCAACGGCGGGCGTGTCACCTCCT
CGGTGCGCTCGCTGGGAGGTCAGAGGTTCATAGCCAGCTTCACGCCGCAC
GAACATGGAACGCACACGGTGCAGATCACCTTCAATGGCGAAACAGTTCC
AGGTTCACCGTGGCACGCTGAAATCATGTCCTCACCCGGCCTAACCGCTC
TGGGCGAATCCACGCGCCTGGTACCCGCCAATACGCCGGCGGTTTTTGAG
ATACTGCCGCCTCCTGGACAAAGCCTGAGTAAGGGCGAGTGCGTGGCGAC
AGTTTTGACTCCTAGCAAGTCAAAGCTGAACGCCAGAGTCACCCACGAGG
CGGCAAATGGTGCTGCTCGCATCGAGTTCGTGCCCACCGAGGTGGGCACC
CACGTGATCGATGCGTCCATTAACGGCACGAAGATCGCTGGCGGCCCGCT
GATCGCCAAGGTCTACGACTCCAGCCTGATCCAGGTGACGGAGGTGAATG
GCGGCGTGGTCGGCCAGGCGTGCCAGTTCCGCGTAGATGCCAGCGCCGCC
GGCGAGGGCCAGCTGGAGATATCCATCAACGAGGGCGAGGTGCCCAATCA
TGTCCAGGTGGTGGGCGGTGGTCGCTGCCTGGTCTCCTTCACGCCGGAGC
AGGCCAAGTCGCATCTGATTGACATCAAATTCAATGGCGAAACGGTGCGC
GGCTGTCCCTTTGTCTGCGCCGTGGCGGACACCTCGCGAGTGCTCCTGAA
TCTCTCCAATCTGGAGCTAATCCCAGTCAACCGGCCCTCCTCCTTTCACA
TCACCGTGAGCGGAGGTGGAGCTGCCGAGCTGGCTGTCAGCGTGCGCGGT
CCCCAGGGCGAGTTGCCTGTCCGGGTGACCGGAGATATCCACGCTGGCTT
CACGGCCGAGTTTACGCCCACCACCGTTGGCGGCCACTCGATCAATGTGG
AGTACAACGGATTCGCCGTGCAGGGAACCCCCTTCCTGGCCAAGTCATAC
GATGCCAGCAAGGTGGTGGTGGGCAGTGTCTCGCGGGGAACCATGGGACG
CCCGGTGCAGTTCACCGTGGATGCGGGCGATGCCGGTGAGGGCAACCTGG
AGATAACGATTTCGGCCAAGGGACAGAACATTCCCACGCAGGTGCATCCG
CAAGGCAGTGCAAGATTTTCGGTTTCGTTTGTGCCCACAGAGTCGTGCGA
GCACACGATCAACGTGTCATTCAACAAAATGCCCGTTCCCGGCTGTCCGA
TTACGGTTAGCATCAGTGGGGGCGTGGCCGGGCCCCAGGTGTCCCTGGGT
GGCCCAGGACCCGTGCATCAGACCAATTCTTTTGTAATCAATCACAATGG
CGGCCGTTTGGAAGACATCGAGGTGAACGTGGAAGGACGGCGAAATCTTT
TGTACTAGAAGCTTTCTAGACCAT

BS07286.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:04:24
Subject Length Description Subject Range Query Range Score Percent Strand
jbug-RL 4842 CG30092-PL 2700..4842 16..2158 10715 100 Plus
jbug-RN 8973 CG30092-PN 2700..4822 16..2138 10615 100 Plus
jbug-RM 8520 CG30092-PM 2352..4474 16..2138 10615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
jbug-RL 5339 CG30092-RL 2904..5048 16..2160 10725 100 Plus
jbug-RN 9391 CG30092-RN 2865..4987 16..2138 10615 100 Plus
jbug-RM 9043 CG30092-RM 2517..4639 16..2138 10615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22724531..22725545 1914..900 5075 100 Minus
2R 25286936 2R 22730310..22730745 483..48 2180 100 Minus
2R 25286936 2R 22729813..22730233 904..484 2105 100 Minus
2R 25286936 2R 22723936..22724159 2136..1913 1120 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:04:24 has no hits.

BS07286.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:07:15 Download gff for BS07286.complete
Subject Subject Range Query Range Percent Splice Strand
jbug-RB 2721..4869 8..2158 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:33:53 Download gff for BS07286.complete
Subject Subject Range Query Range Percent Splice Strand
jbug-RB 2728..4869 17..2158 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:47 Download gff for BS07286.complete
Subject Subject Range Query Range Percent Splice Strand
jbug-RL 2905..5046 17..2158 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:07:15 Download gff for BS07286.complete
Subject Subject Range Query Range Percent Splice Strand
jbug-RB 2721..4877 8..2168 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:37 Download gff for BS07286.complete
Subject Subject Range Query Range Percent Splice Strand
jbug-RL 2905..5046 17..2158 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:37 Download gff for BS07286.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22722882..22722904 2136..2158 100 <- Minus
2R 22723937..22724157 1915..2135 100 <- Minus
2R 22724531..22725542 903..1914 100 <- Minus
2R 22729815..22730233 484..902 100 <- Minus
2R 22730310..22730743 50..483 100 <- Minus
2R 22730815..22730847 17..49 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:47 Download gff for BS07286.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18610387..18610409 2136..2158 100 <- Minus
arm_2R 18611442..18611662 1915..2135 100 <- Minus
arm_2R 18612036..18613047 903..1914 100 <- Minus
arm_2R 18617320..18617738 484..902 100 <- Minus
arm_2R 18617815..18618248 50..483 100 <- Minus
arm_2R 18618320..18618352 17..49 100   Minus

BS07286.pep Sequence

Translation from 16 to 2157

> BS07286.pep
MGSPLTSPVSKNGYESSRTVEKSSTYKSTSNYVTDSNIRASPSLYGTAER
LRRTGSPEPRIDHSSNVRVSSMKPASARRDSWDVINKTKHMLSHNSLESL
ANMTEKQLNTELQYNRPDLDHETHRNTQYNKFALHKQQQQQSDYRRDSPD
DGERYKPSAITVKSHSNNTYTDKSGGYTKTVKESSEHVVTESNGHGPSPG
YGYSSLSRFRPIDGNATGARAIRVQDIPNGSIGRPVEFEIDGSRAGSGNL
EILVNGGRVTSSVRSLGGQRFIASFTPHEHGTHTVQITFNGETVPGSPWH
AEIMSSPGLTALGESTRLVPANTPAVFEILPPPGQSLSKGECVATVLTPS
KSKLNARVTHEAANGAARIEFVPTEVGTHVIDASINGTKIAGGPLIAKVY
DSSLIQVTEVNGGVVGQACQFRVDASAAGEGQLEISINEGEVPNHVQVVG
GGRCLVSFTPEQAKSHLIDIKFNGETVRGCPFVCAVADTSRVLLNLSNLE
LIPVNRPSSFHITVSGGGAAELAVSVRGPQGELPVRVTGDIHAGFTAEFT
PTTVGGHSINVEYNGFAVQGTPFLAKSYDASKVVVGSVSRGTMGRPVQFT
VDAGDAGEGNLEITISAKGQNIPTQVHPQGSARFSVSFVPTESCEHTINV
SFNKMPVPGCPITVSISGGVAGPQVSLGGPGPVHQTNSFVINHNGGRLED
IEVNVEGRRNLLY*

BS07286.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
jbug-PL 1613 CG30092-PL 901..1613 1..713 3695 100 Plus
jbug-PN 2990 CG30092-PN 901..1607 1..707 3664 100 Plus
jbug-PM 2839 CG30092-PM 785..1491 1..707 3664 100 Plus
jbug-PF 2955 CG30092-PF 901..1607 1..707 3664 100 Plus
jbug-PK 410 CG30092-PK 1..410 304..713 2107 100 Plus
jbug-PN 2990 CG30092-PN 1446..1934 184..677 745 35 Plus
jbug-PM 2839 CG30092-PM 1330..1818 184..677 745 35 Plus
jbug-PF 2955 CG30092-PF 1446..1934 184..677 745 35 Plus
jbug-PN 2990 CG30092-PN 1662..2114 221..666 612 31.1 Plus
jbug-PM 2839 CG30092-PM 1546..1998 221..666 612 31.1 Plus
jbug-PF 2955 CG30092-PF 1662..2114 221..666 612 31.1 Plus
jbug-PN 2990 CG30092-PN 1820..2322 199..707 444 26.9 Plus
jbug-PM 2839 CG30092-PM 1704..2206 199..707 444 26.9 Plus
jbug-PF 2955 CG30092-PF 1820..2322 199..707 444 26.9 Plus
jbug-PN 2990 CG30092-PN 2345..2890 180..707 287 23.5 Plus
jbug-PM 2839 CG30092-PM 2229..2774 180..707 287 23.5 Plus
jbug-PF 2955 CG30092-PF 2345..2890 180..707 287 23.5 Plus
jbug-PN 2990 CG30092-PN 2510..2941 256..666 240 25.6 Plus
jbug-PM 2839 CG30092-PM 2394..2825 256..666 240 25.6 Plus
jbug-PF 2955 CG30092-PF 2510..2941 256..666 240 25.6 Plus
jbug-PN 2990 CG30092-PN 2298..2768 232..684 218 21 Plus
jbug-PM 2839 CG30092-PM 2182..2652 232..684 218 21 Plus
jbug-PF 2955 CG30092-PF 2298..2768 232..684 218 21 Plus
jbug-PN 2990 CG30092-PN 2577..2946 229..582 190 23 Plus
jbug-PM 2839 CG30092-PM 2461..2830 229..582 190 23 Plus
jbug-PF 2955 CG30092-PF 2577..2946 229..582 190 23 Plus
jbug-PN 2990 CG30092-PN 2243..2557 365..665 174 22.6 Plus
jbug-PM 2839 CG30092-PM 2127..2441 365..665 174 22.6 Plus
jbug-PF 2955 CG30092-PF 2243..2557 365..665 174 22.6 Plus
jbug-PL 1613 CG30092-PL 392..652 229..491 160 24.1 Plus
jbug-PN 2990 CG30092-PN 392..652 229..491 160 24.1 Plus
jbug-PM 2839 CG30092-PM 392..652 229..491 160 24.1 Plus
jbug-PF 2955 CG30092-PF 392..652 229..491 160 24.1 Plus