Clone Sequence Records
BS07302.3prime Sequence
741 bp (740 high quality bases) assembled on 2006-01-06
> BS07302.3prime
ATGGTCTAGAAAGCTTTCACATGAAGTCGTCATAGTCTTCGGTGAAGTCA
TTTCCGTACTTTTGGTAACCGTCAATGTCGTCGTTTTCGGTGCGGAGAGT
GACCTTGCCCTTGCCCTTTCCAGCGGGCTTTTTAGCATTGGCCTTTTCCA
GCTTCAGCTTTTCCGAGTGCAAGATTTCCACGTTCATCTTGACCTTTTTG
ATGTCAGCAGCGCTCAGATTCACGCATAGGCTGCGCACCAGATCCTCAAC
AAATTGGGGGAAGTGCTCCGACTCGCGGAATTGGCCCACCTTCCAGCTGA
GCGTTGCGCCAAATTCCTTGAACTCCTCCTTGGTCTCGGGGTTGAAGGCG
TCAAGACCTCCGCACGTACTCGTCACACCGAACGCTTCCTGGGCATGCTT
GAGATCAGAGGCCTCCTGGATTTTTTGCAATCGCAGCTTCTCAGCCAACT
TTTCTGCAGGCGATAGGTTGGCCAAACGTTTTGCCTCCGCTTCCTCCTCT
AGGAGCGCCTGCTGTTCCAGTTTGGCTTTTAGCGCCTTATTTGGCTTCGG
TTTGGCTGGTGCTTCTGTTTTCGTAGGCTTCTCCTCGTCCTTTTTTTCCT
CCTCATCCTCCCAGCTGTCCTTGATGTCCTCATCCTCGTCCTCGCCCTCC
CACTTGTTTACGCTGGCGGCGGCAGTCGGCCGGATGACCACCTCGCTGTC
TGCTGCGGATTCCCAATCGTCGGCCATGTCGACTGATAACT
BS07302.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12131-PA | 711 | Adam-RA | 1..711 | 727..17 | 3555 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 12:12:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adam-RB | 1228 | CG12131-RB | 155..868 | 729..16 | 3570 | 100 | Minus |
Adam-RA | 1363 | CG12131-RA | 290..1003 | 729..16 | 3570 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 12:12:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9969918..9970207 | 506..217 | 1450 | 100 | Minus |
2R | 25286936 | 2R | 9970272..9970409 | 216..79 | 690 | 100 | Minus |
2R | 25286936 | 2R | 9969739..9969854 | 621..506 | 580 | 100 | Minus |
2R | 25286936 | 2R | 9969460..9969553 | 712..619 | 470 | 100 | Minus |
2R | 25286936 | 2R | 9970474..9970537 | 79..16 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 12:12:17 has no hits.
BS07302.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:35 Download gff for
BS07302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-PA | 1..711 | 17..727 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:57:09 Download gff for
BS07302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12131-PA | 1..711 | 17..727 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:47:29 Download gff for
BS07302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 285..1012 | 7..735 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:39:21 Download gff for
BS07302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 285..1012 | 7..735 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:39:21 Download gff for
BS07302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9969461..9969552 | 620..711 | 100 | -> | Minus |
2R | 9969741..9969854 | 506..619 | 100 | -> | Minus |
2R | 9969919..9970207 | 217..505 | 100 | -> | Minus |
2R | 9970272..9970408 | 80..216 | 100 | -> | Minus |
2R | 9970474..9970546 | 7..79 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:47:29 Download gff for
BS07302.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5856966..5857057 | 620..711 | 100 | -> | Minus |
arm_2R | 5857246..5857359 | 506..619 | 100 | -> | Minus |
arm_2R | 5857424..5857712 | 217..505 | 100 | -> | Minus |
arm_2R | 5857777..5857913 | 80..216 | 100 | -> | Minus |
arm_2R | 5857979..5858051 | 7..79 | 94 | | Minus |
BS07302.5prime Sequence
741 bp (740 high quality bases) assembled on 2006-01-06
> BS07302.5prime
GAAGTTATCAGTCGACATGGCCGACGATTGGGAATCCGCAGCAGACAGCG
AGGTGGTCATCCGGCCGACTGCCGCCGCCAGCGTAAACAAGTGGGAGGGC
GAGGACGAGGATGAGGACATCAAGGACAGCTGGGAGGATGAGGAGGAAAA
AAAGGACGAGGAGAAGCCTACGAAAACAGAAGCACCAGCCAAACCGAAGC
CAAATAAGGCGCTAAAAGCCAAACTGGAACAGCAGGCGCTCCTAGAGGAG
GAAGCGGAGGCAAAACGTTTGGCCAACCTATCGCCTGCAGAAAAGTTGGC
TGAGAAGCTGCGATTGCAAAAAATCCAGGAGGCCTCTGATCTCAAGCATG
CCCAGGAAGCGTTCGGTGTGACGAGTACGTGCGGAGGTCTTGACGCCTTC
AACCCCGAGACCAAGGAGGAGTTCAAGGAATTTGGCGCAACGCTCAGCTG
GAAGGTGGGCCAATTCCGCGAGTCGGAGCACTTCCCCCAATTTGTTGAGG
ATCTGGTGCGCAGCCTATGCGTGAATCTGAGCGCTGCTGACATCAAAAAG
GTCAAGATGAACGTGGAAATCTTGCACTCGGAAAAGCTGAAGCTGGAAAA
GGCCAATGCTAAAAAGCCCGCTGGAAAGGGCAAGGGCAAGGTCACTCTCC
GCACCGAAAACGACGACATTGACGGTTACCAAAAGTACGGAAATGACTTC
ACCGAAGACTATGACGACTTCATGTGAAAGCTTTCTAGACC
BS07302.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12131-PA | 711 | Adam-RA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:18:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adam-RB | 1228 | CG12131-RB | 155..868 | 15..728 | 3570 | 100 | Plus |
Adam-RA | 1363 | CG12131-RA | 290..1003 | 15..728 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:18:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9969918..9970207 | 238..527 | 1450 | 100 | Plus |
2R | 25286936 | 2R | 9970272..9970409 | 528..665 | 690 | 100 | Plus |
2R | 25286936 | 2R | 9969739..9969854 | 123..238 | 580 | 100 | Plus |
2R | 25286936 | 2R | 9969460..9969553 | 32..125 | 470 | 100 | Plus |
2R | 25286936 | 2R | 9970474..9970537 | 665..728 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:18:20 has no hits.
BS07302.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:36 Download gff for
BS07302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-PA | 1..711 | 17..727 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:57:11 Download gff for
BS07302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12131-PA | 1..711 | 17..727 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:06:06 Download gff for
BS07302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 285..1012 | 9..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:24:38 Download gff for
BS07302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 285..1012 | 9..737 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:24:38 Download gff for
BS07302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9969461..9969552 | 33..124 | 100 | -> | Plus |
2R | 9969741..9969854 | 125..238 | 100 | -> | Plus |
2R | 9969919..9970207 | 239..527 | 100 | -> | Plus |
2R | 9970272..9970408 | 528..664 | 100 | -> | Plus |
2R | 9970474..9970546 | 665..737 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:06:06 Download gff for
BS07302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5857777..5857913 | 528..664 | 100 | -> | Plus |
arm_2R | 5856966..5857057 | 33..124 | 100 | -> | Plus |
arm_2R | 5857246..5857359 | 125..238 | 100 | -> | Plus |
arm_2R | 5857424..5857712 | 239..527 | 100 | -> | Plus |
arm_2R | 5857979..5858051 | 665..737 | 94 | | Plus |
BS07302.complete Sequence
743 bp (743 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635810
> BS07302.complete
GAAGTTATCAGTCGACATGGCCGACGATTGGGAATCCGCAGCAGACAGCG
AGGTGGTCATCCGGCCGACTGCCGCCGCCAGCGTAAACAAGTGGGAGGGC
GAGGACGAGGATGAGGACATCAAGGACAGCTGGGAGGATGAGGAGGAAAA
AAAGGACGAGGAGAAGCCTACGAAAACAGAAGCACCAGCCAAACCGAAGC
CAAATAAGGCGCTAAAAGCCAAACTGGAACAGCAGGCGCTCCTAGAGGAG
GAAGCGGAGGCAAAACGTTTGGCCAACCTATCGCCTGCAGAAAAGTTGGC
TGAGAAGCTGCGATTGCAAAAAATCCAGGAGGCCTCTGATCTCAAGCATG
CCCAGGAAGCGTTCGGTGTGACGAGTACGTGCGGAGGTCTTGACGCCTTC
AACCCCGAGACCAAGGAGGAGTTCAAGGAATTTGGCGCAACGCTCAGCTG
GAAGGTGGGCCAATTCCGCGAGTCGGAGCACTTCCCCCAATTTGTTGAGG
ATCTGGTGCGCAGCCTATGCGTGAATCTGAGCGCTGCTGACATCAAAAAG
GTCAAGATGAACGTGGAAATCTTGCACTCGGAAAAGCTGAAGCTGGAAAA
GGCCAATGCTAAAAAGCCCGCTGGAAAGGGCAAGGGCAAGGTCACTCTCC
GCACCGAAAACGACGACATTGACGGTTACCAAAAGTACGGAAATGACTTC
ACCGAAGACTATGACGACTTCATGTGAAAGCTTTCTAGACCAT
BS07302.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:50:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adam-RB | 711 | CG12131-PB | 1..711 | 17..727 | 3555 | 100 | Plus |
Adam-RA | 711 | CG12131-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:50:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adam-RB | 1228 | CG12131-RB | 155..868 | 15..728 | 3570 | 100 | Plus |
Adam-RA | 1363 | CG12131-RA | 290..1003 | 15..728 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9969918..9970207 | 238..527 | 1450 | 100 | Plus |
2R | 25286936 | 2R | 9970272..9970409 | 528..665 | 690 | 100 | Plus |
2R | 25286936 | 2R | 9969739..9969854 | 123..238 | 580 | 100 | Plus |
2R | 25286936 | 2R | 9969460..9969553 | 32..125 | 470 | 100 | Plus |
2R | 25286936 | 2R | 9970474..9970537 | 665..728 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:50:48 has no hits.
BS07302.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:59 Download gff for
BS07302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 1..711 | 17..727 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:54 Download gff for
BS07302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 254..981 | 9..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:00:43 Download gff for
BS07302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 292..1001 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:59 Download gff for
BS07302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 254..981 | 9..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:35 Download gff for
BS07302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adam-RA | 292..1001 | 17..726 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:35 Download gff for
BS07302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9970272..9970408 | 528..664 | 100 | -> | Plus |
2R | 9970474..9970535 | 665..726 | 100 | | Plus |
2R | 9969461..9969552 | 33..124 | 100 | -> | Plus |
2R | 9969741..9969854 | 125..238 | 100 | -> | Plus |
2R | 9969919..9970207 | 239..527 | 100 | -> | Plus |
2R | 9969220..9969235 | 17..32 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:00:43 Download gff for
BS07302.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5856725..5856740 | 17..32 | 100 | -> | Plus |
arm_2R | 5856966..5857057 | 33..124 | 100 | -> | Plus |
arm_2R | 5857246..5857359 | 125..238 | 100 | -> | Plus |
arm_2R | 5857424..5857712 | 239..527 | 100 | -> | Plus |
arm_2R | 5857777..5857913 | 528..664 | 100 | -> | Plus |
arm_2R | 5857979..5858040 | 665..726 | 100 | | Plus |
BS07302.pep Sequence
Translation from 16 to 726
> BS07302.pep
MADDWESAADSEVVIRPTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEK
PTKTEAPAKPKPNKALKAKLEQQALLEEEAEAKRLANLSPAEKLAEKLRL
QKIQEASDLKHAQEAFGVTSTCGGLDAFNPETKEEFKEFGATLSWKVGQF
RESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVEILHSEKLKLEKANAKK
PAGKGKGKVTLRTENDDIDGYQKYGNDFTEDYDDFM*
BS07302.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:53:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adam-PB | 236 | CG12131-PB | 1..236 | 1..236 | 1220 | 100 | Plus |
Adam-PA | 236 | CG12131-PA | 1..236 | 1..236 | 1220 | 100 | Plus |