Clone BS07302 Report

Search the DGRC for BS07302

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:73
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptAdam-RA
Protein status:BS07302.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07302.3prime Sequence

741 bp (740 high quality bases) assembled on 2006-01-06

> BS07302.3prime
ATGGTCTAGAAAGCTTTCACATGAAGTCGTCATAGTCTTCGGTGAAGTCA
TTTCCGTACTTTTGGTAACCGTCAATGTCGTCGTTTTCGGTGCGGAGAGT
GACCTTGCCCTTGCCCTTTCCAGCGGGCTTTTTAGCATTGGCCTTTTCCA
GCTTCAGCTTTTCCGAGTGCAAGATTTCCACGTTCATCTTGACCTTTTTG
ATGTCAGCAGCGCTCAGATTCACGCATAGGCTGCGCACCAGATCCTCAAC
AAATTGGGGGAAGTGCTCCGACTCGCGGAATTGGCCCACCTTCCAGCTGA
GCGTTGCGCCAAATTCCTTGAACTCCTCCTTGGTCTCGGGGTTGAAGGCG
TCAAGACCTCCGCACGTACTCGTCACACCGAACGCTTCCTGGGCATGCTT
GAGATCAGAGGCCTCCTGGATTTTTTGCAATCGCAGCTTCTCAGCCAACT
TTTCTGCAGGCGATAGGTTGGCCAAACGTTTTGCCTCCGCTTCCTCCTCT
AGGAGCGCCTGCTGTTCCAGTTTGGCTTTTAGCGCCTTATTTGGCTTCGG
TTTGGCTGGTGCTTCTGTTTTCGTAGGCTTCTCCTCGTCCTTTTTTTCCT
CCTCATCCTCCCAGCTGTCCTTGATGTCCTCATCCTCGTCCTCGCCCTCC
CACTTGTTTACGCTGGCGGCGGCAGTCGGCCGGATGACCACCTCGCTGTC
TGCTGCGGATTCCCAATCGTCGGCCATGTCGACTGATAACT

BS07302.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG12131-PA 711 Adam-RA 1..711 727..17 3555 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 12:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 1228 CG12131-RB 155..868 729..16 3570 100 Minus
Adam-RA 1363 CG12131-RA 290..1003 729..16 3570 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 12:12:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9969918..9970207 506..217 1450 100 Minus
2R 25286936 2R 9970272..9970409 216..79 690 100 Minus
2R 25286936 2R 9969739..9969854 621..506 580 100 Minus
2R 25286936 2R 9969460..9969553 712..619 470 100 Minus
2R 25286936 2R 9970474..9970537 79..16 320 100 Minus
Blast to na_te.dros performed on 2015-02-03 12:12:17 has no hits.

BS07302.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:35 Download gff for BS07302.3prime
Subject Subject Range Query Range Percent Splice Strand
Adam-PA 1..711 17..727 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:57:09 Download gff for BS07302.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12131-PA 1..711 17..727 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:47:29 Download gff for BS07302.3prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1012 7..735 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:39:21 Download gff for BS07302.3prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1012 7..735 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:39:21 Download gff for BS07302.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 9969461..9969552 620..711 100 -> Minus
2R 9969741..9969854 506..619 100 -> Minus
2R 9969919..9970207 217..505 100 -> Minus
2R 9970272..9970408 80..216 100 -> Minus
2R 9970474..9970546 7..79 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:47:29 Download gff for BS07302.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5856966..5857057 620..711 100 -> Minus
arm_2R 5857246..5857359 506..619 100 -> Minus
arm_2R 5857424..5857712 217..505 100 -> Minus
arm_2R 5857777..5857913 80..216 100 -> Minus
arm_2R 5857979..5858051 7..79 94   Minus

BS07302.5prime Sequence

741 bp (740 high quality bases) assembled on 2006-01-06

> BS07302.5prime
GAAGTTATCAGTCGACATGGCCGACGATTGGGAATCCGCAGCAGACAGCG
AGGTGGTCATCCGGCCGACTGCCGCCGCCAGCGTAAACAAGTGGGAGGGC
GAGGACGAGGATGAGGACATCAAGGACAGCTGGGAGGATGAGGAGGAAAA
AAAGGACGAGGAGAAGCCTACGAAAACAGAAGCACCAGCCAAACCGAAGC
CAAATAAGGCGCTAAAAGCCAAACTGGAACAGCAGGCGCTCCTAGAGGAG
GAAGCGGAGGCAAAACGTTTGGCCAACCTATCGCCTGCAGAAAAGTTGGC
TGAGAAGCTGCGATTGCAAAAAATCCAGGAGGCCTCTGATCTCAAGCATG
CCCAGGAAGCGTTCGGTGTGACGAGTACGTGCGGAGGTCTTGACGCCTTC
AACCCCGAGACCAAGGAGGAGTTCAAGGAATTTGGCGCAACGCTCAGCTG
GAAGGTGGGCCAATTCCGCGAGTCGGAGCACTTCCCCCAATTTGTTGAGG
ATCTGGTGCGCAGCCTATGCGTGAATCTGAGCGCTGCTGACATCAAAAAG
GTCAAGATGAACGTGGAAATCTTGCACTCGGAAAAGCTGAAGCTGGAAAA
GGCCAATGCTAAAAAGCCCGCTGGAAAGGGCAAGGGCAAGGTCACTCTCC
GCACCGAAAACGACGACATTGACGGTTACCAAAAGTACGGAAATGACTTC
ACCGAAGACTATGACGACTTCATGTGAAAGCTTTCTAGACC

BS07302.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:44:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG12131-PA 711 Adam-RA 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 1228 CG12131-RB 155..868 15..728 3570 100 Plus
Adam-RA 1363 CG12131-RA 290..1003 15..728 3570 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9969918..9970207 238..527 1450 100 Plus
2R 25286936 2R 9970272..9970409 528..665 690 100 Plus
2R 25286936 2R 9969739..9969854 123..238 580 100 Plus
2R 25286936 2R 9969460..9969553 32..125 470 100 Plus
2R 25286936 2R 9970474..9970537 665..728 320 100 Plus
Blast to na_te.dros performed on 2015-02-11 09:18:20 has no hits.

BS07302.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:08:36 Download gff for BS07302.5prime
Subject Subject Range Query Range Percent Splice Strand
Adam-PA 1..711 17..727 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:57:11 Download gff for BS07302.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12131-PA 1..711 17..727 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:06:06 Download gff for BS07302.5prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1012 9..737 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:24:38 Download gff for BS07302.5prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1012 9..737 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:24:38 Download gff for BS07302.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9969461..9969552 33..124 100 -> Plus
2R 9969741..9969854 125..238 100 -> Plus
2R 9969919..9970207 239..527 100 -> Plus
2R 9970272..9970408 528..664 100 -> Plus
2R 9970474..9970546 665..737 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:06:06 Download gff for BS07302.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5857777..5857913 528..664 100 -> Plus
arm_2R 5856966..5857057 33..124 100 -> Plus
arm_2R 5857246..5857359 125..238 100 -> Plus
arm_2R 5857424..5857712 239..527 100 -> Plus
arm_2R 5857979..5858051 665..737 94   Plus

BS07302.complete Sequence

743 bp (743 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635810

> BS07302.complete
GAAGTTATCAGTCGACATGGCCGACGATTGGGAATCCGCAGCAGACAGCG
AGGTGGTCATCCGGCCGACTGCCGCCGCCAGCGTAAACAAGTGGGAGGGC
GAGGACGAGGATGAGGACATCAAGGACAGCTGGGAGGATGAGGAGGAAAA
AAAGGACGAGGAGAAGCCTACGAAAACAGAAGCACCAGCCAAACCGAAGC
CAAATAAGGCGCTAAAAGCCAAACTGGAACAGCAGGCGCTCCTAGAGGAG
GAAGCGGAGGCAAAACGTTTGGCCAACCTATCGCCTGCAGAAAAGTTGGC
TGAGAAGCTGCGATTGCAAAAAATCCAGGAGGCCTCTGATCTCAAGCATG
CCCAGGAAGCGTTCGGTGTGACGAGTACGTGCGGAGGTCTTGACGCCTTC
AACCCCGAGACCAAGGAGGAGTTCAAGGAATTTGGCGCAACGCTCAGCTG
GAAGGTGGGCCAATTCCGCGAGTCGGAGCACTTCCCCCAATTTGTTGAGG
ATCTGGTGCGCAGCCTATGCGTGAATCTGAGCGCTGCTGACATCAAAAAG
GTCAAGATGAACGTGGAAATCTTGCACTCGGAAAAGCTGAAGCTGGAAAA
GGCCAATGCTAAAAAGCCCGCTGGAAAGGGCAAGGGCAAGGTCACTCTCC
GCACCGAAAACGACGACATTGACGGTTACCAAAAGTACGGAAATGACTTC
ACCGAAGACTATGACGACTTCATGTGAAAGCTTTCTAGACCAT

BS07302.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 711 CG12131-PB 1..711 17..727 3555 100 Plus
Adam-RA 711 CG12131-PA 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 1228 CG12131-RB 155..868 15..728 3570 100 Plus
Adam-RA 1363 CG12131-RA 290..1003 15..728 3570 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9969918..9970207 238..527 1450 100 Plus
2R 25286936 2R 9970272..9970409 528..665 690 100 Plus
2R 25286936 2R 9969739..9969854 123..238 580 100 Plus
2R 25286936 2R 9969460..9969553 32..125 470 100 Plus
2R 25286936 2R 9970474..9970537 665..728 320 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:50:48 has no hits.

BS07302.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:59 Download gff for BS07302.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 1..711 17..727 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:54 Download gff for BS07302.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 254..981 9..737 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:00:43 Download gff for BS07302.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 292..1001 17..726 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:59 Download gff for BS07302.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 254..981 9..737 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:35 Download gff for BS07302.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 292..1001 17..726 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:35 Download gff for BS07302.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9970272..9970408 528..664 100 -> Plus
2R 9970474..9970535 665..726 100   Plus
2R 9969461..9969552 33..124 100 -> Plus
2R 9969741..9969854 125..238 100 -> Plus
2R 9969919..9970207 239..527 100 -> Plus
2R 9969220..9969235 17..32 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:00:43 Download gff for BS07302.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5856725..5856740 17..32 100 -> Plus
arm_2R 5856966..5857057 33..124 100 -> Plus
arm_2R 5857246..5857359 125..238 100 -> Plus
arm_2R 5857424..5857712 239..527 100 -> Plus
arm_2R 5857777..5857913 528..664 100 -> Plus
arm_2R 5857979..5858040 665..726 100   Plus

BS07302.pep Sequence

Translation from 16 to 726

> BS07302.pep
MADDWESAADSEVVIRPTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEK
PTKTEAPAKPKPNKALKAKLEQQALLEEEAEAKRLANLSPAEKLAEKLRL
QKIQEASDLKHAQEAFGVTSTCGGLDAFNPETKEEFKEFGATLSWKVGQF
RESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVEILHSEKLKLEKANAKK
PAGKGKGKVTLRTENDDIDGYQKYGNDFTEDYDDFM*

BS07302.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:53:52
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-PB 236 CG12131-PB 1..236 1..236 1220 100 Plus
Adam-PA 236 CG12131-PA 1..236 1..236 1220 100 Plus