Clone Sequence Records
BS07318.3prime Sequence
826 bp (786 high quality bases) assembled on 2006-01-06
> BS07318.3prime
ATGGTCTAGAAAGCTTTTACTCCGCGGACTCAGCGCTCTCGATGGACTCG
CCCTTGGCCTCGGCCTTGGCCTTGTCCTTCTCGGCCTTCGCCTGCTGCTT
GGCCTGCTCCTTGGCGGCCTTCTTGGCGGCCTTCTCCTCCAACTTCTGCT
GCTTCTTGGCCAGCTTCTCCTGCTCCTTCTGCGCTTTGAGGCGCAGCTTG
GCCTCGGCCTTGTACAGCTTCAGCTCCCGCTTGATGGCAGCCAGGTCGCT
GATTTCGGTTGCCTCCTGTCCGGGCACAATCTGCGTCCAGTCATAGCGCC
AGCATCCTCCAATCAGGGGCTCGAACCTCTGGCCACTGGAGCAGCGCACA
ATGAACTTGTGGAAGCCGCCCTGCAAACTGGCCACGCAGCTGTAGTAGTA
GGTCTCATCAATTCCGGCAAATCTGCCCACGGACAGGCACGGGAAGCTCT
CCACCTGGCACTCGGCCAAGTCCCTCACGCATCTGCCCAGGCTCGGCGAG
AAGACGGTCAGTTCCGGGCACGTGAGCTCAATGTCCTGCAGCTGTCGCAG
CACAGGATTCAAGAGACAGTTGTGGTAACGGCTGCAATCGCCACTGATGT
GTGGAAACAGTCCTGCCGTCTGGCATTTGAAAGTGGGCGGGGTGGGTGCA
ATGGTGGTACCTGCCGGCGTGGAAGGACTGGCTGCAGAGGAAGTGCTAGA
ACTCTCTGGCTCTGCAGGAGCGGAGGAGGTTTCTTCGGGAGCGGAAGATG
TCTGCTCGGGCGCTGATGAGGTTTCCTCTGGAGGAGCAGAGCTTTCGTTG
GGAGCTGATGATGTCTGGTCTGGAGC
BS07318.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7874-PA | 1446 | CG7874-RA | 637..1446 | 826..17 | 4050 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:11:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mur18B-RA | 1615 | CG7874-RA | 676..1485 | 826..17 | 4050 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 15:11:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19213999..19214808 | 826..17 | 4050 | 100 | Minus |
Blast to na_te.dros performed 2015-02-08 15:11:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 4509..4584 | 187..114 | 123 | 64.5 | Minus |
BS07318.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:09:05 Download gff for
BS07318.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7874-PA | 637..1446 | 17..826 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:57:53 Download gff for
BS07318.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7874-PA | 637..1446 | 17..826 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 00:03:18 Download gff for
BS07318.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mur18B-RA | 676..1491 | 8..826 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:42:20 Download gff for
BS07318.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mur18B-RA | 676..1491 | 8..826 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:42:20 Download gff for
BS07318.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19213999..19214814 | 8..826 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 00:03:18 Download gff for
BS07318.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19108032..19108847 | 8..826 | 99 | | Minus |
BS07318.5prime Sequence
904 bp (743 high quality bases) assembled on 2006-01-06
> BS07318.5prime
GAAGTTATCAGTCGACATGACAACGACCACATCACCTAGAGAAACCACAC
AGACCACATTTACGGTTCGCAAGATGACGGGCCGGCGAATGTCAAAGCTA
TCCACAGTCCTGCTGTTCTGCGCCGCCTTGCTGCTGACCAAGTCCTGCGG
CATCCTGGCGCTCAGCGGCGACGGTTTGCCCCAATCCCAGGATGTGGGCC
AGGCGGAGCTATGGAGCGATGATGCCACCACCACCATCATTTCGCCCAGC
GAGGAGAACAGCGGTTCCGGTGGCTGGGAACTGACCACGGAGGCGGACAC
CACCATACCGAGTGAGGAAACTACTGCGGGCAATGAGGAAACCACCGTTT
CCGAAGAGGAGACCTCCACGGACGCCTCTGGAGATGTAGAGACCACCACT
GCTGCGCCGGAAACTTCACCAGCTGACCAGGAGAGCTCTTCCGCTCCCGA
AGAGACCACTTCCGCTCCCGAAGAGACCACTTCCGCTCCCGAAGAGACCA
CTTCCGCTCCCGAGGAGAGCTCTTCCGCTCCCGAGGAGAGCTCTTCCGCT
CCCGAGGAGACCACTTCCGCTCCCGAGGAGAGCTCTTCCGCTCCCGAAGA
GAGCTCTTCCGCTCCCGAGGAGACCACTTCCGCTCCCGAGGAGAGCTCTT
CCGCTCCAGACCAGACATCATCAGCTCCCAACGAAAGCTCTGCTCCTCCA
GAGGAAACCTCATCAGCGCCCGAGCAGACATCTTCCGCTCCCGAAGAAAC
CTCCTCCGCTCCTGCAGAGCCAGAGAGTTCTAGCACTTCCTCTGCAGCCA
GTCCTTCCACGCCGGCAGGTACCACCATTGCACCCACCCCGCCCACTTTC
AAATGCCAGACGGCAGGACTGTTTCCACACATCAGTGGCGATTGCAGCCG
TTAC
BS07318.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7874-PA | 1446 | CG7874-RA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mur18B-RA | 1615 | CG7874-RA | 40..927 | 17..904 | 4440 | 100 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 454..702 | 473..721 | 735 | 86.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 496..744 | 431..679 | 735 | 86.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 454..713 | 494..753 | 730 | 85.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 517..776 | 431..690 | 730 | 85.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..680 | 513..741 | 635 | 85.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 536..764 | 429..657 | 635 | 85.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..680 | 534..762 | 620 | 84.7 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 557..785 | 429..657 | 620 | 84.7 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..659 | 555..762 | 485 | 82.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 578..785 | 429..636 | 485 | 82.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..638 | 576..762 | 470 | 83.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 599..785 | 429..615 | 470 | 83.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 454..624 | 599..769 | 375 | 81.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 622..792 | 431..601 | 375 | 81.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..596 | 618..762 | 230 | 77.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 641..785 | 429..573 | 230 | 77.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..575 | 639..762 | 185 | 76.6 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 662..785 | 429..552 | 185 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:32:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19213476..19214250 | 130..904 | 3875 | 100 | Plus |
| X | 23542271 | X | 19213777..19214025 | 473..721 | 735 | 86.3 | Plus |
| X | 23542271 | X | 19213819..19214067 | 431..679 | 735 | 86.3 | Plus |
| X | 23542271 | X | 19213840..19214099 | 431..690 | 730 | 85.4 | Plus |
| X | 23542271 | X | 19213777..19214036 | 494..753 | 730 | 85.4 | Plus |
| X | 23542271 | X | 19213775..19214003 | 513..741 | 635 | 85.2 | Plus |
| X | 23542271 | X | 19213859..19214087 | 429..657 | 635 | 85.2 | Plus |
| X | 23542271 | X | 19213775..19214003 | 534..762 | 620 | 84.7 | Plus |
| X | 23542271 | X | 19213880..19214108 | 429..657 | 620 | 84.7 | Plus |
| X | 23542271 | X | 19213293..19213406 | 17..130 | 570 | 100 | Plus |
| X | 23542271 | X | 19213775..19213982 | 555..762 | 485 | 82.2 | Plus |
| X | 23542271 | X | 19213901..19214108 | 429..636 | 485 | 82.2 | Plus |
| X | 23542271 | X | 19213775..19213961 | 576..762 | 470 | 83.4 | Plus |
| X | 23542271 | X | 19213922..19214108 | 429..615 | 470 | 83.4 | Plus |
| X | 23542271 | X | 19213777..19213947 | 599..769 | 375 | 81.3 | Plus |
| X | 23542271 | X | 19213945..19214115 | 431..601 | 375 | 81.3 | Plus |
| X | 23542271 | X | 19213775..19213919 | 618..762 | 230 | 77.2 | Plus |
| X | 23542271 | X | 19213964..19214108 | 429..573 | 230 | 77.2 | Plus |
| X | 23542271 | X | 19213775..19213898 | 639..762 | 185 | 76.6 | Plus |
| X | 23542271 | X | 19213985..19214108 | 429..552 | 185 | 76.6 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:32:04 has no hits.
BS07318.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:09:06 Download gff for
BS07318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7874-PA | 1..888 | 17..904 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:57:55 Download gff for
BS07318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7874-PA | 1..888 | 17..904 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:34:24 Download gff for
BS07318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mur18B-RA | 40..927 | 17..904 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:01:19 Download gff for
BS07318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mur18B-RA | 40..927 | 17..904 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:01:19 Download gff for
BS07318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19213293..19213406 | 17..130 | 100 | -> | Plus |
| X | 19213477..19214250 | 131..904 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:34:24 Download gff for
BS07318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19107326..19107439 | 17..130 | 100 | -> | Plus |
| arm_X | 19107510..19108283 | 131..904 | 100 | | Plus |
BS07318.complete Sequence
1478 bp (1478 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635814
> BS07318.complete
GAAGTTATCAGTCGACATGACAACGACCACATCACCTAGAGAAACCACAC
AGACCACATTTACGGTTCGCAAGATGACGGGCCGGCGAATGTCAAAGCTA
TCCACAGTCCTGCTGTTCTGCGCCGCCTTGCTGCTGACCAAGTCCTGCGG
CATCCTGGCGCTCAGCGGCGACGGTTTGCCCCAATCCCAGGATGTGGGCC
AGGCGGAGCTATGGAGCGATGATGCCACCACCACCATCATTTCGCCCAGC
GAGGAGAACAGCGGTTCCGGTGGCTGGGAACTGACCACGGAGGCGGACAC
CACCATACCGAGTGAGGAAACTACTGCGGGCAATGAGGAAACCACCGTTT
CCGAAGAGGAGACCTCCACGGACGCCTCTGGAGATGTAGAGACCACCACT
GCTGCGCCGGAAACTTCACCAGCTGACCAGGAGAGCTCTTCCGCTCCCGA
AGAGACCACTTCCGCTCCCGAAGAGACCACTTCCGCTCCCGAAGAGACCA
CTTCCGCTCCCGAGGAGAGCTCTTCCGCTCCCGAGGAGAGCTCTTCCGCT
CCCGAGGAGACCACTTCCGCTCCCGAGGAGAGCTCTTCCGCTCCCGAAGA
GAGCTCTTCCGCTCCCGAGGAGACCACTTCCGCTCCCGAGGAGAGCTCTT
CCGCTCCAGACCAGACATCATCAGCTCCCAACGAAAGCTCTGCTCCTCCA
GAGGAAACCTCATCAGCGCCCGAGCAGACATCTTCCGCTCCCGAAGAAAC
CTCCTCCGCTCCTGCAGAGCCAGAGAGTTCTAGCACTTCCTCTGCAGCCA
GTCCTTCCACGCCGGCAGGTACCACCATTGCACCCACCCCGCCCACTTTC
AAATGCCAGACGGCAGGACTGTTTCCACACATCAGTGGCGATTGCAGCCG
TTACCACAACTGTCTCTTGAATCCTGTGCTGCGACAGCTGCAGGACATTG
AGCTCACGTGCCCGGAACTGACCGTCTTCTCGCCGAGCCTGGGCAGATGC
GTGAGGGACTTGGCCGAGTGCCAGGTGGAGAGCTTCCCGTGCCTGTCCGT
GGGCAGATTTGCCGGAATTGATGAGACCTACTACTACAGCTGCGTGGCCA
GTTTGCAGGGCGGCTTCCACAAGTTCATTGTGCGCTGCTCCAGTGGCCAG
AGGTTCGAGCCCCTGATTGGAGGATGCTGGCGCTATGACTGGACGCAGAT
TGTGCCCGGACAGGAGGCAACCGAAATCAGCGACCTGGCTGCCATCAAGC
GGGAGCTGAAGCTGTACAAGGCCGAGGCCAAGCTGCGCCTCAAAGCGCAG
AAGGAGCAGGAGAAGCTGGCCAAGAAGCAGCAGAAGTTGGAGGAGAAGGC
CGCCAAGAAGGCCGCCAAGGAGCAGGCCAAGCAGCAGGCGAAGGCCGAGA
AGGACAAGGCCAAGGCCGAGGCCAAGGGCGAGTCCATCGAGAGCGCTGAG
TCCGCGGAGTAAAAGCTTTCTAGACCAT
BS07318.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:58:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mur18B-RA | 1446 | CG7874-PA | 1..1446 | 17..1462 | 7230 | 100 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 415..663 | 473..721 | 735 | 86.3 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 457..705 | 431..679 | 735 | 86.3 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 415..674 | 494..753 | 730 | 85.4 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 478..737 | 431..690 | 730 | 85.4 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 413..641 | 513..741 | 635 | 85.2 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 497..725 | 429..657 | 635 | 85.2 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 413..641 | 534..762 | 620 | 84.7 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 518..746 | 429..657 | 620 | 84.7 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 413..620 | 555..762 | 485 | 82.2 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 539..746 | 429..636 | 485 | 82.2 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 413..599 | 576..762 | 470 | 83.4 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 560..746 | 429..615 | 470 | 83.4 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 415..585 | 599..769 | 375 | 81.3 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 583..753 | 431..601 | 375 | 81.3 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 602..746 | 429..573 | 230 | 77.2 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 413..557 | 618..762 | 230 | 77.2 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 413..536 | 639..762 | 185 | 76.6 | Plus |
| Mur18B-RA | 1446 | CG7874-PA | 623..746 | 429..552 | 185 | 76.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:59:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mur18B-RA | 1615 | CG7874-RA | 40..1485 | 17..1462 | 7230 | 100 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 454..702 | 473..721 | 735 | 86.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 496..744 | 431..679 | 735 | 86.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 454..713 | 494..753 | 730 | 85.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 517..776 | 431..690 | 730 | 85.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..680 | 513..741 | 635 | 85.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 536..764 | 429..657 | 635 | 85.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..680 | 534..762 | 620 | 84.7 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 557..785 | 429..657 | 620 | 84.7 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..659 | 555..762 | 485 | 82.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 578..785 | 429..636 | 485 | 82.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..638 | 576..762 | 470 | 83.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 599..785 | 429..615 | 470 | 83.4 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 454..624 | 599..769 | 375 | 81.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 622..792 | 431..601 | 375 | 81.3 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..596 | 618..762 | 230 | 77.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 641..785 | 429..573 | 230 | 77.2 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 452..575 | 639..762 | 185 | 76.6 | Plus |
| Mur18B-RA | 1615 | CG7874-RA | 662..785 | 429..552 | 185 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19213476..19214808 | 130..1462 | 6665 | 100 | Plus |
| X | 23542271 | X | 19213819..19214067 | 431..679 | 735 | 86.3 | Plus |
| X | 23542271 | X | 19213777..19214025 | 473..721 | 735 | 86.3 | Plus |
| X | 23542271 | X | 19213777..19214036 | 494..753 | 730 | 85.4 | Plus |
| X | 23542271 | X | 19213840..19214099 | 431..690 | 730 | 85.4 | Plus |
| X | 23542271 | X | 19213775..19214003 | 513..741 | 635 | 85.2 | Plus |
| X | 23542271 | X | 19213859..19214087 | 429..657 | 635 | 85.2 | Plus |
| X | 23542271 | X | 19213775..19214003 | 534..762 | 620 | 84.7 | Plus |
| X | 23542271 | X | 19213880..19214108 | 429..657 | 620 | 84.7 | Plus |
| X | 23542271 | X | 19213293..19213406 | 17..130 | 570 | 100 | Plus |
| X | 23542271 | X | 19213775..19213982 | 555..762 | 485 | 82.2 | Plus |
| X | 23542271 | X | 19213901..19214108 | 429..636 | 485 | 82.2 | Plus |
| X | 23542271 | X | 19213775..19213961 | 576..762 | 470 | 83.4 | Plus |
| X | 23542271 | X | 19213922..19214108 | 429..615 | 470 | 83.4 | Plus |
| X | 23542271 | X | 19213777..19213947 | 599..769 | 375 | 81.3 | Plus |
| X | 23542271 | X | 19213945..19214115 | 431..601 | 375 | 81.3 | Plus |
| X | 23542271 | X | 19213775..19213919 | 618..762 | 230 | 77.2 | Plus |
| X | 23542271 | X | 19213964..19214108 | 429..573 | 230 | 77.2 | Plus |
| X | 23542271 | X | 19213775..19213898 | 639..762 | 185 | 76.6 | Plus |
| X | 23542271 | X | 19213985..19214108 | 429..552 | 185 | 76.6 | Plus |
Blast to na_te.dros performed 2014-11-27 13:58:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 4509..4584 | 1292..1365 | 123 | 64.5 | Plus |
BS07318.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:29 Download gff for
BS07318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7874-RA | 1..1446 | 17..1462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:47:46 Download gff for
BS07318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7874-RA | 37..1488 | 17..1471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:37:20 Download gff for
BS07318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mur18B-RA | 40..1483 | 17..1460 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:29 Download gff for
BS07318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7874-RA | 37..1488 | 17..1471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:14 Download gff for
BS07318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mur18B-RA | 40..1483 | 17..1460 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:14 Download gff for
BS07318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19213293..19213406 | 17..130 | 100 | -> | Plus |
| X | 19213477..19214806 | 131..1460 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:37:20 Download gff for
BS07318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19107326..19107439 | 17..130 | 100 | -> | Plus |
| arm_X | 19107510..19108839 | 131..1460 | 100 | | Plus |
BS07318.pep Sequence
Translation from 16 to 1461
> BS07318.pep
MTTTTSPRETTQTTFTVRKMTGRRMSKLSTVLLFCAALLLTKSCGILALS
GDGLPQSQDVGQAELWSDDATTTIISPSEENSGSGGWELTTEADTTIPSE
ETTAGNEETTVSEEETSTDASGDVETTTAAPETSPADQESSSAPEETTSA
PEETTSAPEETTSAPEESSSAPEESSSAPEETTSAPEESSSAPEESSSAP
EETTSAPEESSSAPDQTSSAPNESSAPPEETSSAPEQTSSAPEETSSAPA
EPESSSTSSAASPSTPAGTTIAPTPPTFKCQTAGLFPHISGDCSRYHNCL
LNPVLRQLQDIELTCPELTVFSPSLGRCVRDLAECQVESFPCLSVGRFAG
IDETYYYSCVASLQGGFHKFIVRCSSGQRFEPLIGGCWRYDWTQIVPGQE
ATEISDLAAIKRELKLYKAEAKLRLKAQKEQEKLAKKQQKLEEKAAKKAA
KEQAKQQAKAEKDKAKAEAKGESIESAESAE*
BS07318.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mur18B-PA | 481 | CG7874-PA | 1..481 | 1..481 | 2442 | 100 | Plus |
| Fst-PA | 286 | CG9434-PA | 124..280 | 64..211 | 272 | 53.1 | Plus |
| CG6296-PA | 676 | CG6296-PA | 342..559 | 53..277 | 268 | 31.2 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 358..583 | 68..272 | 264 | 31.9 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 646..871 | 68..272 | 263 | 31 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 790..1015 | 68..272 | 263 | 31 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 261..487 | 68..272 | 261 | 32.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 502..727 | 68..272 | 259 | 30.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 121..343 | 75..272 | 258 | 32.4 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1318..1573 | 68..303 | 258 | 27.9 | Plus |
| Fst-PA | 286 | CG9434-PA | 108..285 | 83..261 | 257 | 40.5 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 214..439 | 68..272 | 256 | 32 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1126..1351 | 68..272 | 256 | 30.7 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 406..631 | 68..272 | 255 | 31.5 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1030..1255 | 68..272 | 255 | 31 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 934..1159 | 68..272 | 254 | 30.6 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 886..1111 | 68..272 | 253 | 30.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 694..919 | 68..272 | 251 | 30.6 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 853..1063 | 68..272 | 251 | 31.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1174..1399 | 68..272 | 251 | 30.2 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 598..828 | 68..278 | 250 | 30.5 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1270..1495 | 68..272 | 248 | 30.3 | Plus |
| CG6296-PA | 676 | CG6296-PA | 412..638 | 68..276 | 241 | 34.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 434..654 | 56..282 | 241 | 29.6 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 146..366 | 56..282 | 240 | 29.6 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 769..990 | 68..282 | 239 | 30 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 962..1182 | 56..282 | 236 | 28.3 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1222..1470 | 68..282 | 232 | 26.5 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 1578..1854 | 63..328 | 232 | 26.9 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1414..1645 | 68..299 | 229 | 31.1 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 982..1230 | 68..282 | 227 | 26.1 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 106..295 | 87..272 | 225 | 31.2 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1105..1326 | 68..282 | 224 | 27.4 | Plus |
| Fst-PA | 286 | CG9434-PA | 115..272 | 131..277 | 206 | 39.9 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 126..270 | 137..282 | 179 | 30.2 | Plus |
| CG6296-PA | 676 | CG6296-PA | 474..653 | 56..244 | 162 | 28.5 | Plus |
| CG6296-PA | 676 | CG6296-PA | 334..480 | 135..265 | 159 | 34.4 | Plus |
