Clone Sequence Records
BS07321.3prime Sequence
952 bp (799 high quality bases) assembled on 2006-01-06
> BS07321.3prime
ATGGTCTAGAAAGCTTCTACTCTGCAATGGGCGGATTCAGAACCAGCTCC
CAGGTATCTTCCTCCGTCGACTCGGAGCTCTTCATTTCATCGGAACGCAG
GGCGTGGCAACGATTGCACTTCGCTCGGTACCAGAAATTCATATTATAGC
AAATCTTGCACAGCCAGTCGTTCCTGTATGGCCGCCAACGACGAGGGGCA
CCGTCCTCTTCGCGTGATCCCGCCCAGGAACTTCCCTCGTTATTCTGAGG
AGCGACCACCTTGTCCGCCTGGCATCTGTTGCAGCTGGAACGCCAGACGA
AGTTGCTGTTCCGGCAGAGCATGCACACCCAATTGTCGATGGCTGGCTTC
CATTTCATTGCCCGCTGGCGACGTTGGTGCTCCGGCGCATTAAGCTCTCG
CGGATAACTGTACCGGACACTGCCCCTCCGGGTGGATAGGTAGGCGGGCA
GAACGGTGATCACCTGTCCCATGAACTTGGCCCCACTCAGACAACTAATC
GCCGCCTGTGCAGAGAATGGACTCACATAGGTTATAGTGGCCTCACCCTT
GGAGCGCCCCGTTATCTTGTTCTTGTAGACGAAGATCTTCGGCTTGTTGG
TCGACTCGTCCATCTTGATAACGCCCACTTTGCCGAAGAACAGGATGATG
TCGTTCTTGGTCACATTGAGGCGCATGCCCAGCACGAAGACAGTTTCCGC
CTGGATCACGTACTGCTCCTGACCGATGCTTATATAGGGCCTATGCCGCG
GGAGCGCCAGGCGGGGCATGTAGTCGGCGGCGGTGCGCGGGAACACCATG
TAGGATGTGTTGCCACCCATGCAGGGTAACAGCGGCGGCCTCTGCTCGCC
ATTACCTCCTCTGNCAGCTCCTCCATTTCCCCCATTTCCCCTATATCTCC
ATTCAGCTCTTCCCGCTCCAGCGTCTCACATTGGTTCATCTGAAGATCCC
GT
BS07321.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-PA | 1341 | CG14718-RA | 504..1341 | 854..17 | 4190 | 100 | Minus |
| CG14718-PA | 1341 | CG14718-RA | 405..503 | 952..854 | 451 | 97.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:59:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 537..1475 | 952..15 | 4644 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:59:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11701150..11702088 | 952..15 | 4619 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:59:04 has no hits.
BS07321.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:09:11 Download gff for
BS07321.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 405..1341 | 17..952 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:58:03 Download gff for
BS07321.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 405..1341 | 17..952 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:00:25 Download gff for
BS07321.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 537..1484 | 6..952 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:14:37 Download gff for
BS07321.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 537..1484 | 6..952 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:14:37 Download gff for
BS07321.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11701150..11702097 | 6..952 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:00:25 Download gff for
BS07321.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526872..7527819 | 6..952 | 99 | | Minus |
BS07321.5prime Sequence
949 bp (873 high quality bases) assembled on 2006-01-06
> BS07321.5prime
GAAGTTATCAGTCGACATGGATAGCACGTCAGCCAGCGTAGTGTATACGA
ATTCTTTTTACGCTCCAAATTACTCGGACACCCAGCAGCCACAGCCACAG
CTGCAGACTCAGCAACAGATGTTCCATGCCAACTACATCGTCGGAACCAC
ATTGGGTTCTGGATTGGGATTTAATTTTGCACCAGCCCCCATTCCCCAGG
CGAGTGCCGCTTCCGGTTTGAGTCCCAGAGGCATGTACAGTGATCTCTAC
CGCTACGAGGATGGAAGCGGCGATGCCAGCGGTTCCTTGCTTCTGGTCCA
AGAGGATGACCACTTCTGTGGTGCAGAGGCGGACCAGCAGTTGGTGGCCA
GCACGTCGTCCTCATGCCCGATGGCGAGTTCAGGCGAGTCCGTGAGCATT
GACACAGAGCAGGAGGCGGAACGGGATCTTCAGATGAACCAATGTGAGAC
GCTGGAGCGGGAAGAGCTGAATGGAGATATAGGGGAAATGGGGGAAATGG
AGGAGCTTGCAGAGGAGGTTAATGGCGAGCAGAGGCCGCCGCTGTTACCC
TGCATGGGTGGCAACACATCCTACATGGTGTTCCCGCGCACCGCCGCCGA
CTACATGCCCCGCCTGGCGCTCCCGCGGCATAGGCCCTATATAAGCATCG
GTCAGGAGCAGTACGTGATCCAGGCGGAAACTGTCTTCGTGCTGGGCATG
CGCCTCAATGTGACCAAGAACGACATCATCCTGTTCTTCGGCAAAGTGGG
CGTTATCAAGATGGACGAGTCGACCAACAAGCCGAAGATCTTCGTCTACA
AGAACAAGATAACGGGGCGCTCCAAGGGTGAGGCCACTATAACCTATGTG
AGTCCATTCTCTGCACAGGCGGCGATTAGTTGTCTGAGTGGGGCCAAGTC
ATGGGACAGGTGATCACCGTTCTGCCCGCCTACCTATCCACCCGGAGGG
BS07321.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-PA | 1341 | CG14718-RA | 1..883 | 17..899 | 4415 | 100 | Plus |
| CG14718-PA | 1341 | CG14718-RA | 884..934 | 899..949 | 255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:14:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 132..1066 | 16..949 | 4650 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11700745..11701679 | 16..949 | 4625 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:14:01 has no hits.
BS07321.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:09:12 Download gff for
BS07321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 1..934 | 17..949 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:58:05 Download gff for
BS07321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 1..934 | 17..949 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:57:43 Download gff for
BS07321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1066 | 9..949 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:57:29 Download gff for
BS07321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1066 | 9..949 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:57:29 Download gff for
BS07321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11700741..11701679 | 9..949 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:57:43 Download gff for
BS07321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526463..7527401 | 9..949 | 99 | | Plus |
BS07321.complete Sequence
1373 bp (1373 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635816
> BS07321.complete
GAAGTTATCAGTCGACATGGATAGCACGTCAGCCAGCGTAGTGTATACGA
ATTCTTTTTACGCTCCAAATTACTCGGACACCCAGCAGCCACAGCCACAG
CTGCAGACTCAGCAACAGATGTTCCATGCCAACTACATCGTCGGAACCAC
ATTGGGTTCTGGATTGGGATTTAATTTTGCACCAGCCCCCATTCCCCAGG
CGAGTGCCGCTTCCGGTTTGAGTCCCAGAGGCATGTACAGTGATCTCTAC
CGCTACGAGGATGGAAGCGGCGATGCCAGCGGTTCCTTGCTTCTGGTCCA
AGAGGATGACCACTTCTGTGGTGCAGAGGCGGACCAGCAGTTGGTGGCCA
GCACGTCGTCCTCATGCCCGATGGCGAGTTCAGGCGAGTCCGTGAGCATT
GACACAGAGCAGGAGGCGGAACGGGATCTTCAGATGAACCAATGTGAGAC
GCTGGAGCGGGAAGAGCTGAATGGAGATATAGGGGAAATGGGGGAAATGG
AGGAGCTTGCAGAGGAGGTTAATGGCGAGCAGAGGCCGCCGCTGTTACCC
TGCATGGGTGGCAACACATCCTACATGGTGTTCCCGCGCACCGCCGCCGA
CTACATGCCCCGCCTGGCGCTCCCGCGGCATAGGCCCTATATAAGCATCG
GTCAGGAGCAGTACGTGATCCAGGCGGAAACTGTCTTCGTGCTGGGCATG
CGCCTCAATGTGACCAAGAACGACATCATCCTGTTCTTCGGCAAAGTGGG
CGTTATCAAGATGGACGAGTCGACCAACAAGCCGAAGATCTTCGTCTACA
AGAACAAGATAACGGGGCGCTCCAAGGGTGAGGCCACTATAACCTATGTG
AGTCCATTCTCTGCACAGGCGGCGATTAGTTGTCTGAGTGGGGCCAAGTT
CATGGGACAGGTGATCACCGTTCTGCCCGCCTACCTATCCACCCGGAGGG
GCAGTGTCCGGTACAGTTATCCGCGAGAGCTTAATGCGCCGGAGCACCAA
CGTCGCCAGCGGGCAATGAAATGGAAGCCAGCCATCGACAATTGGGTGTG
CATGCTCTGCCGGAACAGCAACTTCGTCTGGCGTTCCAGCTGCAACAGAT
GCCAGGCGGACAAGGTGGTCGCTCCTCAGAATAACGAGGGAAGTTCCTGG
GCGGGATCACGCGAAGAGGACGGTGCCCCTCGTCGTTGGCGGCCATACAG
GAACGACTGGCTGTGCAAGATTTGCTATAATATGAATTTCTGGTACCGAG
CGAAGTGCAATCGTTGCCACGCCCTGCGTTCCGATGAAATGAAGAGCTCC
GAGTCGACGGAGGAAGATACCTGGGAGCTGGTTCTGAATCCGCCCATTGC
AGAGTAGAAGCTTTCTAGACCAT
BS07321.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 1341 | CG14718-PA | 1..1341 | 17..1357 | 6705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 132..1475 | 16..1359 | 6720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11700745..11702088 | 16..1359 | 6720 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:25:57 has no hits.
BS07321.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:41 Download gff for
BS07321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 1..1341 | 17..1357 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:53:47 Download gff for
BS07321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1484 | 9..1368 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:55 Download gff for
BS07321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 133..1473 | 17..1357 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:42 Download gff for
BS07321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1484 | 9..1368 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:11:23 Download gff for
BS07321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 133..1473 | 17..1357 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:11:23 Download gff for
BS07321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11700746..11702086 | 17..1357 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:55 Download gff for
BS07321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526468..7527808 | 17..1357 | 100 | | Plus |
BS07321.pep Sequence
Translation from 16 to 1356
> BS07321.pep
MDSTSASVVYTNSFYAPNYSDTQQPQPQLQTQQQMFHANYIVGTTLGSGL
GFNFAPAPIPQASAASGLSPRGMYSDLYRYEDGSGDASGSLLLVQEDDHF
CGAEADQQLVASTSSSCPMASSGESVSIDTEQEAERDLQMNQCETLEREE
LNGDIGEMGEMEELAEEVNGEQRPPLLPCMGGNTSYMVFPRTAADYMPRL
ALPRHRPYISIGQEQYVIQAETVFVLGMRLNVTKNDIILFFGKVGVIKMD
ESTNKPKIFVYKNKITGRSKGEATITYVSPFSAQAAISCLSGAKFMGQVI
TVLPAYLSTRRGSVRYSYPRELNAPEHQRRQRAMKWKPAIDNWVCMLCRN
SNFVWRSSCNRCQADKVVAPQNNEGSSWAGSREEDGAPRRWRPYRNDWLC
KICYNMNFWYRAKCNRCHALRSDEMKSSESTEEDTWELVLNPPIAE*
BS07321.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:24:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-PA | 446 | CG14718-PA | 1..446 | 1..446 | 2374 | 100 | Plus |
| caz-PD | 355 | CG3606-PD | 67..157 | 212..302 | 213 | 48.4 | Plus |
| caz-PC | 384 | CG3606-PC | 96..186 | 212..302 | 213 | 48.4 | Plus |
| caz-PB | 399 | CG3606-PB | 111..201 | 212..302 | 213 | 48.4 | Plus |
