Clone BS07337 Report

Search the DGRC for BS07337

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:73
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG8974-RA
Protein status:BS07337.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07337.3prime Sequence

864 bp (786 high quality bases) assembled on 2006-01-06

> BS07337.3prime
ATGGTCTAGAAAGCTTCTATGCATAGAACAGCCACAATATCCACACAACG
GCCAAATACGAAAACAGCTTGGACAGGGTCTGTTCATCCTCGTATTGCCT
TGTTCCCCGATTAGCAGCAGGTGGACGTGGTTCGCCAAAGTTGAGCGTAG
ATGTTATGAACCCGAAAGGAAAAGCTCCAATACCGAAAGACATGTGAAAT
CCGTCGCCGAATCCGAATCCAGGGAACCCGGGAACAGGATCTGGTTCTGT
ACGTTGTCCAGCGGGGCGTGGTGGAACTTTGTTACGTGGATCTTCCTGGT
GTGTACTATTTCTTCCGTACAGCGGTATGACCTTATCCTTATCAACGGCA
GCCTTACAAACGGGACAGAGTTTGCGATTGGGACGCGTCAGGAGCCACTG
ATGCAGGCACGGCCAGCAGAACAGATGGCCGCACATGCTGACCACAGCAT
CCTTGGCGGTGTCCAGGCATATGTTGCACTCGTAGAGTGAGTCGTCTGCG
GTATGTTCCTTCTCCTTGTCCTTTTCGTTGGCTTTTGTGTCCGTATCGGT
GCCGCCGAATGGATAGCCACCCTTCAGATCGGCCTTATTGCCACCAGATA
GATAGTCTCCAGTAAAGGAATACGAAGTGTTGGACTTCTTCAGTTCCGAT
GCCGTCGAATTGGTTGGAATCGAGGTACCCAGCGGGCGCAATTGACTTGT
AGATGACTCCTCAGCCAAGGGTTCTGTGATATCCCGAGTCCAGGCTATCT
TGTCGTAGCTCACGTTGTTGGACAAAGTCGATGAGGACGACGATGCCCCG
GTTGATGTGCTGGGAAGCTCCGCTGTGGGTACACTTTTCGGTTCCTCCAT
GTCGACTGATAACT

BS07337.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG8974-PC 834 CG8974-RC 1..834 850..17 4170 100 Minus
CG8974-PA 834 CG8974-RA 1..834 850..17 4170 100 Minus
CG8974-PB 834 CG8974-RB 1..834 850..17 4170 100 Minus
CG8974-PD 834 CG8974-RD 1..834 850..17 4170 100 Minus
CG8974-PE 834 CG8974-RE 1..834 850..17 4170 100 Minus
CG32581-PA 675 CG32581-RA 1..544 850..307 2695 99.8 Minus
CG32581-PA 675 CG32581-RA 545..675 284..154 655 100 Minus
CG32847-PB 495 CG32847-RB 44..119 486..411 155 88.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG8974-RE 1317 CG8974-RE 103..937 851..17 4175 100 Minus
CG8974-RD 1280 CG8974-RD 66..900 851..17 4175 100 Minus
CG8974-RB 1389 CG8974-RB 175..1009 851..17 4175 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 14:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15794497..15795063 285..851 2835 100 Plus
X 23542271 X 15797667..15798233 285..851 2820 99.8 Plus
X 23542271 X 15794267..15794434 118..285 840 100 Plus
X 23542271 X 15797437..15797604 118..285 795 98.2 Plus
X 23542271 X 15794101..15794202 17..118 510 100 Plus
3L 28110227 3L 15121665..15121843 486..308 310 78.2 Minus
Blast to na_te.dros performed on 2015-01-30 14:10:54 has no hits.

BS07337.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:09:46 Download gff for BS07337.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-PD 1..834 17..850 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:58:49 Download gff for BS07337.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-PA 1..834 17..850 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:00:21 Download gff for BS07337.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 170..1015 12..858 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:32:26 Download gff for BS07337.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 170..1015 12..858 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:32:26 Download gff for BS07337.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15794095..15794201 12..117 98 <- Plus
X 15794267..15794433 118..284 100 <- Plus
X 15794497..15795068 285..858 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:00:21 Download gff for BS07337.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15688128..15688234 12..117 98 <- Plus
arm_X 15688300..15688466 118..284 100 <- Plus
arm_X 15688530..15689101 285..858 99   Plus

BS07337.5prime Sequence

846 bp (762 high quality bases) assembled on 2006-01-06

> BS07337.5prime
GAAGTTATCAGTCGACATGGAGGAACCGAAAAGTGTACCCACAGCGGAGC
TTCCCAGCACATCAACCGGGGCATCGTCGTCCTCATCGACTTTGTCCAAC
AACGTGAGCTACGACAAGATAGCCTGGACTCGGGATATCACAGAACCCTT
GGCTGAGGAGTCATCTACAAGTCAATTGCGCCCGCTGGGTACCTCGATTC
CAACCAATTCGACGGCATCGGAACTGAAGAAGTCCAACACTTCGTATTCC
TTTACTGGAGACTATCTATCTGGTGGCAATAAGGCCGATCTGAAGGGTGG
CTATCCATTCGGCGGCACCGATACGGACACAAAAGCCAACGAAAAGGACA
AGGAGAAGGAACATACCGCAGACGACTCACTCTACGAGTGCAACATATGC
CTGGACACCGCCAAGGATGCTGTGGTCAGCATGTGCGGCCATCTGTTCTG
CTGGCCGTGCCTGCATCAGTGGCTCCTGACGCGTCCCAATCGCAAACTCT
GTCCCGTTTGTAAGGCTGCCGTTGATAAGGATAAGGTCATACCGCTGTAC
GGAAGAAATAGTACACACCAGGAAGATCCACGTAACAAAGTTCCACCACG
CCCCGCTGGACAACGTACAGAACCAGATCCTGTTCCCGGGTTCCCTGGAT
TCGGATTCGGCGACGGATTTCACATGTCTTTCGGTATTGGAGCTTTTCCT
TTCGGGTTCATAACATCTACGCTCAACTTTGGCGAACCACGTCCACCTGC
TGCTAATCGGGGAACAAGGCAATACGAGGATGAACAGACCCTGTCCAAGC
TGTTTTCGTATTTGGCCGTTGTGTGGATATTGTGGCTGTTCTATGC

BS07337.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG8974-PC 834 CG8974-RC 1..830 17..846 4150 100 Plus
CG8974-PA 834 CG8974-RA 1..830 17..846 4150 100 Plus
CG8974-PB 834 CG8974-RB 1..830 17..846 4150 100 Plus
CG8974-PD 834 CG8974-RD 1..830 17..846 4150 100 Plus
CG8974-PE 834 CG8974-RE 1..830 17..846 4150 100 Plus
CG32581-PA 675 CG32581-RA 1..544 17..560 2695 99.8 Plus
CG32581-PA 675 CG32581-RA 545..675 583..713 655 100 Plus
CG32847-PB 495 CG32847-RB 44..119 381..456 155 88.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG8974-RE 1317 CG8974-RE 103..933 16..846 4155 100 Plus
CG8974-RD 1280 CG8974-RD 66..896 16..846 4155 100 Plus
CG8974-RB 1389 CG8974-RB 175..1005 16..846 4155 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15794497..15795063 582..16 2835 100 Minus
X 23542271 X 15797667..15798233 582..16 2820 99.8 Minus
X 23542271 X 15794267..15794434 749..582 840 100 Minus
X 23542271 X 15797437..15797604 749..582 795 98.2 Minus
X 23542271 X 15794105..15794202 846..749 490 100 Minus
3L 28110227 3L 15121665..15121843 381..559 310 78.2 Plus
Blast to na_te.dros performed on 2015-02-11 09:18:16 has no hits.

BS07337.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:09:47 Download gff for BS07337.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-PD 1..830 17..846 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:58:51 Download gff for BS07337.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-PA 1..830 17..846 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:06:04 Download gff for BS07337.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 170..1005 9..846 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:24:23 Download gff for BS07337.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 170..1005 9..846 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:24:23 Download gff for BS07337.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15794105..15794201 750..846 100 <- Minus
X 15794267..15794433 583..749 100 <- Minus
X 15794497..15795068 9..582 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:06:04 Download gff for BS07337.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15688138..15688234 750..846 100 <- Minus
arm_X 15688300..15688466 583..749 100 <- Minus
arm_X 15688530..15689101 9..582 99   Minus

BS07337.complete Sequence

866 bp (866 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635820

> BS07337.complete
GAAGTTATCAGTCGACATGGAGGAACCGAAAAGTGTACCCACAGCGGAGC
TTCCCAGCACATCAACCGGGGCATCGTCGTCCTCATCGACTTTGTCCAAC
AACGTGAGCTACGACAAGATAGCCTGGACTCGGGATATCACAGAACCCTT
GGCTGAGGAGTCATCTACAAGTCAATTGCGCCCGCTGGGTACCTCGATTC
CAACCAATTCGACGGCATCGGAACTGAAGAAGTCCAACACTTCGTATTCC
TTTACTGGAGACTATCTATCTGGTGGCAATAAGGCCGATCTGAAGGGTGG
CTATCCATTCGGCGGCACCGATACGGACACAAAAGCCAACGAAAAGGACA
AGGAGAAGGAACATACCGCAGACGACTCACTCTACGAGTGCAACATATGC
CTGGACACCGCCAAGGATGCTGTGGTCAGCATGTGCGGCCATCTGTTCTG
CTGGCCGTGCCTGCATCAGTGGCTCCTGACGCGTCCCAATCGCAAACTCT
GTCCCGTTTGTAAGGCTGCCGTTGATAAGGATAAGGTCATACCGCTGTAC
GGAAGAAATAGTACACACCAGGAAGATCCACGTAACAAAGTTCCACCACG
CCCCGCTGGACAACGTACAGAACCAGATCCTGTTCCCGGGTTCCCTGGAT
TCGGATTCGGCGACGGATTTCACATGTCTTTCGGTATTGGAGCTTTTCCT
TTCGGGTTCATAACATCTACGCTCAACTTTGGCGAACCACGTCCACCTGC
TGCTAATCGGGGAACAAGGCAATACGAGGATGAACAGACCCTGTCCAAGC
TGTTTTCGTATTTGGCCGTTGTGTGGATATTGTGGCTGTTCTATGCATAG
AAGCTTTCTAGACCAT

BS07337.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG8974-RE 834 CG8974-PE 1..834 17..850 4170 100 Plus
CG8974-RD 834 CG8974-PD 1..834 17..850 4170 100 Plus
CG8974-RB 834 CG8974-PB 1..834 17..850 4170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:23:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG8974-RE 1317 CG8974-RE 103..937 16..850 4175 100 Plus
CG8974-RD 1280 CG8974-RD 66..900 16..850 4175 100 Plus
CG8974-RB 1389 CG8974-RB 175..1009 16..850 4175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15794497..15795063 582..16 2835 100 Minus
X 23542271 X 15797667..15798233 582..16 2820 99.8 Minus
X 23542271 X 15794267..15794434 749..582 840 100 Minus
X 23542271 X 15797437..15797604 749..582 795 98.2 Minus
X 23542271 X 15794101..15794202 850..749 510 100 Minus
3L 28110227 3L 15121665..15121843 381..559 310 78.2 Plus
Blast to na_te.dros performed on 2014-11-27 07:23:36 has no hits.

BS07337.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:33 Download gff for BS07337.complete
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 1..834 17..850 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:47:49 Download gff for BS07337.complete
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 195..1040 9..855 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:13:54 Download gff for BS07337.complete
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 176..1009 17..850 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:33 Download gff for BS07337.complete
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 195..1040 9..855 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:43 Download gff for BS07337.complete
Subject Subject Range Query Range Percent Splice Strand
CG8974-RB 176..1009 17..850 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:43 Download gff for BS07337.complete
Subject Subject Range Query Range Percent Splice Strand
X 15794101..15794201 750..850 100 <- Minus
X 15794267..15794433 583..749 100 <- Minus
X 15794497..15795062 17..582 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:13:54 Download gff for BS07337.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15688134..15688234 750..850 100 <- Minus
arm_X 15688300..15688466 583..749 100 <- Minus
arm_X 15688530..15689095 17..582 100   Minus

BS07337.pep Sequence

Translation from 16 to 849

> BS07337.pep
MEEPKSVPTAELPSTSTGASSSSSTLSNNVSYDKIAWTRDITEPLAEESS
TSQLRPLGTSIPTNSTASELKKSNTSYSFTGDYLSGGNKADLKGGYPFGG
TDTDTKANEKDKEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLH
QWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNSTHQEDPRNKVPPRPAGQR
TEPDPVPGFPGFGFGDGFHMSFGIGAFPFGFITSTLNFGEPRPPAANRGT
RQYEDEQTLSKLFSYLAVVWILWLFYA*

BS07337.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8974-PE 277 CG8974-PE 1..277 1..277 1501 100 Plus
CG8974-PD 277 CG8974-PD 1..277 1..277 1501 100 Plus
CG8974-PB 277 CG8974-PB 1..277 1..277 1501 100 Plus
CG8974-PA 277 CG8974-PA 1..277 1..277 1501 100 Plus
CG8974-PC 277 CG8974-PC 1..277 1..277 1501 100 Plus