Clone Sequence Records
BS07349.3prime Sequence
678 bp (677 high quality bases) assembled on 2006-01-06
> BS07349.3prime
ATGGTCTAGAAAGCTTCTACGTAATGTGCATCGCCTTCGCCGCCTTGGCG
GCCTGCGCACTGATCTCGTCCATGCTCTTCCGCGCGCTCTCCGTCACCTC
GTCGATGGAGCGCCGTGTGTTGTGCAGAAGTTCGTCGGTGCCGCGAGCGA
TGCCCTTGACCTCCGTGTTGATCAGCCCGATCACCCACTCCAGGCCCTGG
CGTCCCTTGCCGGCATTTGTGCTAATGGTCGAGGTGAGCAGGTCCTCCAT
GTAGTGGGACAGCGGCACACCAAAGACGGTCACGGTGGCCTCCTGCTTGA
GCAGCGTCTTGCTGGCATCCGACGGATGCGGCTCATAGTAGAGCACCTCG
TCCACGCTGATGTTGCGGCAGAAGGTGAGGTTGTTTGTCTTCAGCACCAT
CTGTTTGCGCTCCGGGTCCACCGTGGAGCGTTCGCTGGCGAAACAAGTTT
TGGCCGTGCCGATCAGCGCGTGCGTCCACTTGGGGAAGTACCACTTGGAC
TGCACCAGGCGATGCGTGTGCAGGACGCCGTCCACCACACGGCGCTCGAC
CACGTCCGTGCCAATGATGGAGGGCGTCATCGGATTGGGGTACTTGCGCC
ACGCCGCCTGCGTGACCGTCTCCCACGGGTGGTTGAATATGTGCTCCGAT
GTCCAGATTTTCATGTCGACTGATAACT
BS07349.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9131-PA | 648 | slmo-RA | 1..648 | 664..17 | 3240 | 100 | Minus |
CG9131-PB | 648 | slmo-RB | 1..648 | 664..17 | 3240 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:57:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 1419 | CG9131-RE | 235..882 | 664..17 | 3240 | 100 | Minus |
slmo-RD | 2056 | CG9131-RD | 1007..1654 | 664..17 | 3240 | 100 | Minus |
slmo-RC | 1703 | CG9131-RC | 654..1301 | 664..17 | 3240 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:57:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6047053..6047700 | 17..664 | 3240 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:57:24 has no hits.
BS07349.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:10:12 Download gff for
BS07349.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-PA | 1..648 | 17..664 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:59:25 Download gff for
BS07349.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9131-PB | 1..648 | 17..664 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:07:50 Download gff for
BS07349.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1306 | 9..672 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:18:25 Download gff for
BS07349.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1306 | 9..672 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:18:25 Download gff for
BS07349.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6047048..6047704 | 9..672 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:07:50 Download gff for
BS07349.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6047048..6047704 | 9..672 | 98 | | Plus |
BS07349.5prime Sequence
678 bp (677 high quality bases) assembled on 2006-01-06
> BS07349.5prime
GAAGTTATCAGTCGACATGAAAATCTGGACATCGGAGCACATATTCAACC
ACCCGTGGGAGACGGTCACGCAGGCGGCGTGGCGCAAGTACCCCAATCCG
ATGACGCCCTCCATCATTGGCACGGACGTGGTCGAGCGCCGTGTGGTGGA
CGGCGTCCTGCACACGCATCGCCTGGTGCAGTCCAAGTGGTACTTCCCCA
AGTGGACGCACGCGCTGATCGGCACGGCCAAAACTTGTTTCGCCAGCGAA
CGCTCCACGGTGGACCCGGAGCGCAAACAGATGGTGCTGAAGACAAACAA
CCTCACCTTCTGCCGCAACATCAGCGTGGACGAGGTGCTCTACTATGAGC
CGCATCCGTCGGATGCCAGCAAGACGCTGCTCAAGCAGGAGGCCACCGTG
ACCGTCTTTGGTGTGCCGCTGTCCCACTACATGGAGGACCTGCTCACCTC
GACCATTAGCACAAATGCCGGCAAGGGACGCCAGGGCCTGGAGTGGGTGA
TCGGGCTGATCAACACGGAGGTCAAGGGCATCGCTCGCGGCACCGACGAA
CTTCTGCACAACACACGGCGCTCCATCGACGAGGTGACGGAGAGCGCGCG
GAAGAGCATGGACGAGATCAGTGCGCAGGCCGCCAAGGCGGCGAAGGCGA
TGCACATTACGTAGAAGCTTTCTAGACC
BS07349.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:45:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9131-PA | 648 | slmo-RA | 1..648 | 17..664 | 3240 | 100 | Plus |
CG9131-PB | 648 | slmo-RB | 1..648 | 17..664 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:35:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 1419 | CG9131-RE | 235..882 | 17..664 | 3240 | 100 | Plus |
slmo-RD | 2056 | CG9131-RD | 1007..1654 | 17..664 | 3240 | 100 | Plus |
slmo-RC | 1703 | CG9131-RC | 654..1301 | 17..664 | 3240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:35:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6047053..6047700 | 664..17 | 3240 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:35:46 has no hits.
BS07349.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:10:13 Download gff for
BS07349.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-PA | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:59:26 Download gff for
BS07349.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9131-PB | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:35:43 Download gff for
BS07349.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1306 | 9..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:17:05 Download gff for
BS07349.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1306 | 9..672 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:17:05 Download gff for
BS07349.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6047048..6047704 | 9..672 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:35:43 Download gff for
BS07349.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6047048..6047704 | 9..672 | 98 | | Minus |
BS07349.complete Sequence
680 bp (680 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635826
> BS07349.complete
GAAGTTATCAGTCGACATGAAAATCTGGACATCGGAGCACATATTCAACC
ACCCGTGGGAGACGGTCACGCAGGCGGCGTGGCGCAAGTACCCCAATCCG
ATGACGCCCTCCATCATTGGCACGGACGTGGTCGAGCGCCGTGTGGTGGA
CGGCGTCCTGCACACGCATCGCCTGGTGCAGTCCAAGTGGTACTTCCCCA
AGTGGACGCACGCGCTGATCGGCACGGCCAAAACTTGTTTCGCCAGCGAA
CGCTCCACGGTGGACCCGGAGCGCAAACAGATGGTGCTGAAGACAAACAA
CCTCACCTTCTGCCGCAACATCAGCGTGGACGAGGTGCTCTACTATGAGC
CGCATCCGTCGGATGCCAGCAAGACGCTGCTCAAGCAGGAGGCCACCGTG
ACCGTCTTTGGTGTGCCGCTGTCCCACTACATGGAGGACCTGCTCACCTC
GACCATTAGCACAAATGCCGGCAAGGGACGCCAGGGCCTGGAGTGGGTGA
TCGGGCTGATCAACACGGAGGTCAAGGGCATCGCTCGCGGCACCGACGAA
CTTCTGCACAACACACGGCGCTCCATCGACGAGGTGACGGAGAGCGCGCG
GAAGAGCATGGACGAGATCAGTGCGCAGGCCGCCAAGGCGGCGAAGGCGA
TGCACATTACGTAGAAGCTTTCTAGACCAT
BS07349.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:44:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 648 | CG9131-PE | 1..648 | 17..664 | 3240 | 100 | Plus |
slmo-RD | 648 | CG9131-PD | 1..648 | 17..664 | 3240 | 100 | Plus |
slmo-RC | 648 | CG9131-PC | 1..648 | 17..664 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:44:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 1419 | CG9131-RE | 235..882 | 17..664 | 3240 | 100 | Plus |
slmo-RD | 2056 | CG9131-RD | 1007..1654 | 17..664 | 3240 | 100 | Plus |
slmo-RC | 1703 | CG9131-RC | 654..1301 | 17..664 | 3240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:44:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6047053..6047700 | 664..17 | 3240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 23:44:02 has no hits.
BS07349.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:49:19 Download gff for
BS07349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:37:37 Download gff for
BS07349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 449..1105 | 9..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:36:37 Download gff for
BS07349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 654..1301 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:49:19 Download gff for
BS07349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 449..1105 | 9..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:06 Download gff for
BS07349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 654..1301 | 17..664 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:06 Download gff for
BS07349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6047053..6047700 | 17..664 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:36:37 Download gff for
BS07349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6047053..6047700 | 17..664 | 100 | | Minus |
BS07349.pep Sequence
Translation from 16 to 663
> BS07349.pep
MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHT
HRLVQSKWYFPKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCR
NISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTISTN
AGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEVTESARKSMDE
ISAQAAKAAKAMHIT*
BS07349.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:34:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-PE | 215 | CG9131-PE | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PD | 215 | CG9131-PD | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PC | 215 | CG9131-PC | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PB | 215 | CG9131-PB | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PA | 215 | CG9131-PA | 1..215 | 1..215 | 1130 | 100 | Plus |