Clone Sequence Records
BS07381.3prime Sequence
938 bp (833 high quality bases) assembled on 2006-01-09
> BS07381.3prime
ATGGTCTAGAAAGCTTTTACCATTTGTCTATGGACATATCGCTCAGTGCG
TCAGATAACTTCTCCAGATCCACGACATCATTGGTTTTTTCACCTTTGCT
GCTCCTGCCTATGGGATCCAGAGGTCCTTTTCTAATGGACATTTCTTTCA
GACATGAGTCACACTTTAAGTTAGTGGAACTGGGACTGCGTTGGTCATCG
GAGGAAAGTCCTGCAACTGCCAGTGTGGCGACGGCCTGGTGCCTCCAAAT
GAAATTCTCTCGACGTTTCAAGTCCTCGGCTAGAGCGCGCAATCTTTGGC
GCTCCAACCTTGTGGATTCCTGTAATCGTCGCACCTTGTCCTCCTTCTCC
TTCAGGTCGTTCTTTTCCTGGCACAAAATTTGGTCATATAGCATGCGGAC
ATTGTCGTCCCTTCGCGAGCAGGCCCGTTTCACCATGGCATTCAGAGTAT
TCTCGAAACTGAGATCCAACTCGGAGATCTGCAAGCTGGTGATCATATCG
TTCCGCAGAAAGGGCTCCAGGCAGGTGGTCAGAAAATTGAGTCGCACTGA
CTCGCCTGGCCATTTTTTCAGAAGCTGGCAGGCCGCACGGCAGGATTGAT
AGATACCCTCCTGGGGAAGTTTCGTTTTGGCCAACGCCGACTTCTCGGCA
ATCTGCTTCTCCAGAATTTGGCTCCTGCTAAGGTATAGCTTTTCCGCTTC
CACCGTGCGACAGTGCAGCGAGTCGATTTCCTTAAGCAGATCCTGGTTAG
ACCGCTTAATGCTCTCGAACTCGGGCGTGGAAATGGGATAGGGCACCCCA
GGGGAGAAAGAACTACTGCCCACTGCATAGTTGGAGACATTGGTGTCCGA
GTCCTCAATATCTTCAACCGGCGACATTTGCCCCTCCCTCACAGTAGTCG
TCCCATGGTACTCGTTCAGCCAATCGTCCATGGGGCGA
BS07381.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:46:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-PA | 1170 | CG7366-RA | 367..1170 | 820..17 | 4020 | 100 | Minus |
| CG7366-PA | 1170 | CG7366-RA | 249..361 | 938..826 | 490 | 97.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1340 | CG7366-RA | 340..1261 | 938..17 | 4520 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:53:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8201157..8202078 | 17..938 | 4490 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:53:45 has no hits.
BS07381.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:11:14 Download gff for
BS07381.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 250..1170 | 17..937 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:00:50 Download gff for
BS07381.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 250..1170 | 17..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:34:09 Download gff for
BS07381.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 341..1265 | 12..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:53:26 Download gff for
BS07381.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 341..1265 | 12..937 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:53:26 Download gff for
BS07381.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8201153..8202077 | 12..937 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:34:09 Download gff for
BS07381.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8194253..8195177 | 12..937 | 99 | | Plus |
BS07381.5prime Sequence
883 bp (851 high quality bases) assembled on 2006-01-06
> BS07381.5prime
GAAGTTATCAGTCGACATGACTCAGTTAAGCGAGTTCGCCCTGGACAGCC
ACTTTGCCTCCGAGCTGCGCAGCCTGCAGTTGTATTCCAAGGAGCACCCT
GTCAGCCAAGATGACCACGACATAAGTCAGCGTTGGATGCAGCACTTCCA
AAACGCCAAGGGTTTGGATAAATTCGCACGAAACTGCATGCTGCTGATGA
TGTGCGAACAGTTGCGAGATCTTGGCCACTTGAGCAAACCCTTCACCGAA
CTGAAGAACTTGAGTCGCCCCATGGACGATTTGCTGAACGAGTACCATGG
GACGACTACTGTGGAGGAGGGGCAAATGTCGCCGGTTGAAGATATTGAGG
ACTCGGACACCAATGTCTCCAACTATGGCAGTGGCAGTAGTTCTTTCTCC
CCTGGGGTGCCCTATCCCATTTCCACGCCCGAGTTCGAGAGCATTAAGCG
GTCTAACCAGGATCTGCTTAAGGAAATCGACTCGCTGCACTGTCGCACGG
TGGAAGCGGAAAAGCTATACCTTAGCAGGAGCCAAATTCTGGAGAAGCAG
ATTGCCGAGAAGTCGGCGTTGGCCAAAACGAAACTTCCCCAGGAGGGTAT
CTATCAATCCTGCCGTGCGGCCTGCCAGCTTCTGAAAAAATGGCCAGGCG
AGTCAGTGCGACTCAATTTTCTGACCACCTGCCTGGAGCCCTTTCTGCGG
AACGATATGATCACCAGCTTGCAGATCTCCGAGTTGGATCTCAGTTTCGA
GAATACTCTGAATGCCATGGTGAAACGGGCCTGCTCGCGAAGGGACGACA
ATGTCCGCATGCTATATGACCAAATTTTGTGCCAGGAAAAGAACGACCTG
AAGGAGAAGGAGGACAAGGTGCGACGATNACAG
BS07381.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-PA | 1170 | CG7366-RA | 1..867 | 17..883 | 4316 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1340 | CG7366-RA | 92..958 | 17..883 | 4324 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:33:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8201460..8202326 | 883..17 | 4324 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:34:00 has no hits.
BS07381.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:11:15 Download gff for
BS07381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 1..867 | 17..883 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:00:51 Download gff for
BS07381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 1..867 | 17..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:35:06 Download gff for
BS07381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 87..958 | 9..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:10:43 Download gff for
BS07381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 87..958 | 9..883 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:10:43 Download gff for
BS07381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8201460..8202331 | 9..883 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:35:06 Download gff for
BS07381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8194560..8195431 | 9..883 | 99 | | Minus |
BS07381.complete Sequence
1202 bp (1202 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635835
> BS07381.complete
GAAGTTATCAGTCGACATGACTCAGTTAAGCGAGTTCGCCCTGGACAGCC
ACTTTGCCTCCGAGCTGCGCAGCCTGCAGTTGTATTCCAAGGAGCACCCT
GTCAGCCAAGATGACCACGACATAAGTCAGCGTTGGATGCAGCACTTCCA
AAACGCCAAGGGTTTGGATAAATTCGCACGAAACTGCATGCTGCTGATGA
TGTGCGAACAGTTGCGAGATCTTGGCCACTTGAGCAAACCCTTCACCGAA
CTGAAGAACTTGAGTCGCCCCATGGACGATTTGCTGAACGAGTACCATGG
GACGACTACTGTGGAGGAGGGGCAAATGTCGCCGGTTGAAGATATTGAGG
ACTCGGACACCAATGTCTCCAACTATGGCAGTGGCAGTAGTTCTTTCTCC
CCTGGGGTGCCCTATCCCATTTCCACGCCCGAGTTCGAGAGCATTAAGCG
GTCTAACCAGGATCTGCTTAAGGAAATCGACTCGCTGCACTGTCGCACGG
TGGAAGCGGAAAAGCTATACCTTAGCAGGAGCCAAATTCTGGAGAAGCAG
ATTGCCGAGAAGTCGGCGTTGGCCAAAACGAAACTTCCCCAGGAGGGTAT
CTATCAATCCTGCCGTGCGGCCTGCCAGCTTCTGAAAAAATGGCCAGGCG
AGTCAGTGCGACTCAATTTTCTGACCACCTGCCTGGAGCCCTTTCTGCGG
AACGATATGATCACCAGCTTGCAGATCTCCGAGTTGGATCTCAGTTTCGA
GAATACTCTGAATGCCATGGTGAAACGGGCCTGCTCGCGAAGGGACGACA
ATGTCCGCATGCTATATGACCAAATTTTGTGCCAGGAAAAGAACGACCTG
AAGGAGAAGGAGGACAAGGTGCGACGATTACAGGAATCCACAAGGTTGGA
GCGCCAAAGATTGCGCGCTCTAGCCGAGGACTTGAAACGTCGAGAGAATT
TCATTTGGAGGCACCAGGCCGTCGCCACACTGGCAGTTGCAGGACTTTCC
TCCGATGACCAACGCAGTCCCAGTTCCACTAACTTAAAGTGTGACTCATG
TCTGAAAGAAATGTCCATTAGAAAAGGACCTCTGGATCCCATAGGCAGGA
GCAGCAAAGGTGAAAAAACCAATGATGTCGTGGATCTGGAGAAGTTATCT
GACGCACTGAGCGATATGTCCATAGACAAATGGTAAAAGCTTTCTAGACC
AT
BS07381.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:01:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1170 | CG7366-PA | 1..1170 | 17..1186 | 5850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:01:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1340 | CG7366-RA | 92..1261 | 17..1186 | 5850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:01:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8201157..8202326 | 1186..17 | 5850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:01:13 has no hits.
BS07381.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:21 Download gff for
BS07381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 1..1170 | 17..1186 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:47:34 Download gff for
BS07381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 66..1244 | 9..1191 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:28 Download gff for
BS07381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 92..1259 | 17..1184 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:21 Download gff for
BS07381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 66..1244 | 9..1191 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:32 Download gff for
BS07381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 92..1259 | 17..1184 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:32 Download gff for
BS07381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8201159..8202326 | 17..1184 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:28 Download gff for
BS07381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8194259..8195426 | 17..1184 | 100 | | Minus |
BS07381.pep Sequence
Translation from 16 to 1185
> BS07381.pep
MTQLSEFALDSHFASELRSLQLYSKEHPVSQDDHDISQRWMQHFQNAKGL
DKFARNCMLLMMCEQLRDLGHLSKPFTELKNLSRPMDDLLNEYHGTTTVE
EGQMSPVEDIEDSDTNVSNYGSGSSSFSPGVPYPISTPEFESIKRSNQDL
LKEIDSLHCRTVEAEKLYLSRSQILEKQIAEKSALAKTKLPQEGIYQSCR
AACQLLKKWPGESVRLNFLTTCLEPFLRNDMITSLQISELDLSFENTLNA
MVKRACSRRDDNVRMLYDQILCQEKNDLKEKEDKVRRLQESTRLERQRLR
ALAEDLKRRENFIWRHQAVATLAVAGLSSDDQRSPSSTNLKCDSCLKEMS
IRKGPLDPIGRSSKGEKTNDVVDLEKLSDALSDMSIDKW*
BS07381.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:26:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-PA | 389 | CG7366-PA | 1..389 | 1..389 | 2005 | 100 | Plus |
| CG8006-PA | 503 | CG8006-PA | 1..94 | 1..95 | 180 | 40 | Plus |
