Clone Sequence Records
BS07424.3prime Sequence
717 bp (716 high quality bases) assembled on 2006-01-06
> BS07424.3prime
ATGGTCTAGAAAGCTTCTAGTCCCGGATGAAGACGAACTCATTGTAGTGG
TTCCAGCGATTTTCCTCTGTGTCCACGCCCGGCTTGGGTTCCGCTGCCGA
GCCGGCAGTTCCGGATCCGCAGCTTCCGGCCATGCGGTATCCGTGGTCGT
GCAGATTGTCGAAAGCCTGCTCGATGTAGCAGTGCTTCAGGAAGAACCGC
GAGGTGTACCGATCCGTGCCACCATGATCCGGATCCCGGGACTCGTTCAG
CGTATCGCCGAACACCTCGCGGCACTGGGCCACTCGGCCGCAGACCAGGA
TGCGCGACAGCTTCCGGAACTTAACGTCGGCCAGTCCGTCTTTGCCGAAC
TGGAAGCTGCCACGGTAACCGATGGTGATGCATCCGGGTGGTCGAGCGTC
CCGCTCGCTGCGGATGCACTCGAGCATGGCGGTCAGCTTAAAGTGCTCCG
CCTCCCGCAGCAGCCGCTGTCGCTCGCGGAATCCTTCGGGAAGGTGCAGC
GCCTTGTCGCGCAGGAAGTCCAGGATGTAGCGGAAGAGGACGCCGTCACG
GTCCAGGAAGTAGCGACCCTTGCTGTCCTTGGCCAGCGAATCGCGACCCT
CGCCAAAGAGTTCCGCCAGCAGCGTGCTCTTATCCTGCAGCAGTGTGGCC
AGTGTGGTCGTGTAGCTCACGCCGCCGACGTTCAGCTCGATGATTTCGGG
CATGTCGACTGATAACT
BS07424.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:47:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10830-PA | 687 | CG10830-RA | 1..687 | 703..17 | 3435 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:29:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10830-RA | 2869 | CG10830-RA | 184..877 | 704..12 | 3445 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:28:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20896450..20897137 | 17..704 | 3440 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:29:00 has no hits.
BS07424.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:12:23 Download gff for
BS07424.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-PA | 1..687 | 17..703 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:02:21 Download gff for
BS07424.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-PA | 1..687 | 17..703 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:29:42 Download gff for
BS07424.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 177..883 | 5..711 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:06:34 Download gff for
BS07424.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 177..883 | 5..711 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:06:34 Download gff for
BS07424.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20896438..20897140 | 5..711 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:29:42 Download gff for
BS07424.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16722160..16722862 | 5..711 | 98 | | Plus |
BS07424.5prime Sequence
717 bp (716 high quality bases) assembled on 2006-01-06
> BS07424.5prime
GAAGTTATCAGTCGACATGCCCGAAATCATCGAGCTGAACGTCGGCGGCG
TGAGCTACACGACCACACTGGCCACACTGCTGCAGGATAAGAGCACGCTG
CTGGCGGAACTCTTTGGCGAGGGTCGCGATTCGCTGGCCAAGGACAGCAA
GGGTCGCTACTTCCTGGACCGTGACGGCGTCCTCTTCCGCTACATCCTGG
ACTTCCTGCGCGACAAGGCGCTGCACCTTCCCGAAGGATTCCGCGAGCGA
CAGCGGCTGCTGCGGGAGGCGGAGCACTTTAAGCTGACCGCCATGCTCGA
GTGCATCCGCAGCGAGCGGGACGCTCGACCACCCGGATGCATCACCATCG
GTTACCGTGGCAGCTTCCAGTTCGGCAAAGACGGACTGGCCGACGTTAAG
TTCCGGAAGCTGTCGCGCATCCTGGTCTGCGGCCGAGTGGCCCAGTGCCG
CGAGGTGTTCGGCGATACGCTGAACGAGTCCCGGGATCCGGATCATGGTG
GCACGGATCGGTACACCTCGCGGTTCTTCCTGAAGCACTGCTACATCGAG
CAGGCTTTCGACAATCTGCACGACCACGGATACCGCATGGCCGGAAGCTG
CGGATCCGGAACTGCCGGCTCGGCAGCGGAACCCAAGCCGGGCGTGGACA
CAGAGGAAAATCGCTGGAACCACTACAATGAGTTCGTCTTCATCCGGGAC
TAGAAGCTTTCTAGACC
BS07424.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:47:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10830-PA | 687 | CG10830-RA | 1..687 | 17..703 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:15:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10830-RA | 2869 | CG10830-RA | 184..877 | 16..708 | 3445 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:15:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20896450..20897137 | 703..16 | 3440 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:15:46 has no hits.
BS07424.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:12:24 Download gff for
BS07424.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-PA | 1..687 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:02:23 Download gff for
BS07424.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-PA | 1..687 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:36:54 Download gff for
BS07424.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 177..883 | 9..715 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:35:54 Download gff for
BS07424.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 177..883 | 9..715 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:35:54 Download gff for
BS07424.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20896438..20897140 | 9..715 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:36:54 Download gff for
BS07424.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16722160..16722862 | 9..715 | 98 | | Minus |
BS07424.complete Sequence
719 bp (719 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635856
> BS07424.complete
GAAGTTATCAGTCGACATGCCCGAAATCATCGAGCTGAACGTCGGCGGCG
TGAGCTACACGACCACACTGGCCACACTGCTGCAGGATAAGAGCACGCTG
CTGGCGGAACTCTTTGGCGAGGGTCGCGATTCGCTGGCCAAGGACAGCAA
GGGTCGCTACTTCCTGGACCGTGACGGCGTCCTCTTCCGCTACATCCTGG
ACTTCCTGCGCGACAAGGCGCTGCACCTTCCCGAAGGATTCCGCGAGCGA
CAGCGGCTGCTGCGGGAGGCGGAGCACTTTAAGCTGACCGCCATGCTCGA
GTGCATCCGCAGCGAGCGGGACGCTCGACCACCCGGATGCATCACCATCG
GTTACCGTGGCAGCTTCCAGTTCGGCAAAGACGGACTGGCCGACGTTAAG
TTCCGGAAGCTGTCGCGCATCCTGGTCTGCGGCCGAGTGGCCCAGTGCCG
CGAGGTGTTCGGCGATACGCTGAACGAGTCCCGGGATCCGGATCATGGTG
GCACGGATCGGTACACCTCGCGGTTCTTCCTGAAGCACTGCTACATCGAG
CAGGCTTTCGACAATCTGCACGACCACGGATACCGCATGGCCGGAAGCTG
CGGATCCGGAACTGCCGGCTCGGCAGCGGAACCCAAGCCGGGCGTGGACA
CAGAGGAAAATCGCTGGAACCACTACAATGAGTTCGTCTTCATCCGGGAC
TAGAAGCTTTCTAGACCAT
BS07424.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:42:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10830-RA | 687 | CG10830-PA | 1..687 | 17..703 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:42:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10830-RA | 2869 | CG10830-RA | 184..871 | 16..703 | 3440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:42:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20896450..20897137 | 703..16 | 3440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:42:34 has no hits.
BS07424.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:06 Download gff for
BS07424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 1..687 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:47:14 Download gff for
BS07424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 177..871 | 9..703 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:30:00 Download gff for
BS07424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 185..871 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:07 Download gff for
BS07424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 177..871 | 9..703 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:37 Download gff for
BS07424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10830-RA | 185..871 | 17..703 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:37 Download gff for
BS07424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20896450..20897136 | 17..703 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:30:00 Download gff for
BS07424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16722172..16722858 | 17..703 | 100 | | Minus |
BS07424.pep Sequence
Translation from 16 to 702
> BS07424.pep
MPEIIELNVGGVSYTTTLATLLQDKSTLLAELFGEGRDSLAKDSKGRYFL
DRDGVLFRYILDFLRDKALHLPEGFRERQRLLREAEHFKLTAMLECIRSE
RDARPPGCITIGYRGSFQFGKDGLADVKFRKLSRILVCGRVAQCREVFGD
TLNESRDPDHGGTDRYTSRFFLKHCYIEQAFDNLHDHGYRMAGSCGSGTA
GSAAEPKPGVDTEENRWNHYNEFVFIRD*
BS07424.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10830-PA | 228 | CG10830-PA | 1..228 | 1..228 | 1214 | 100 | Plus |
CG10440-PA | 338 | CG10440-PA | 108..207 | 5..104 | 172 | 38.6 | Plus |
CG10440-PB | 367 | CG10440-PB | 137..236 | 5..104 | 172 | 38.6 | Plus |
CG10465-PA | 301 | CG10465-PA | 19..115 | 3..99 | 159 | 38.8 | Plus |