Clone BS07432 Report

Search the DGRC for BS07432

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:74
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG31523-RA
Protein status:BS07432.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07432.3prime Sequence

954 bp (878 high quality bases) assembled on 2006-01-06

> BS07432.3prime
ATGGTCTAGAAAGCTTTTATTTGACTTTGCGCTGGTGCAGACTAGAACTA
CTGCTGTCCGGGTTGAAGATGGCATCGTTGTTGGATAACACGCCCTCCTT
GAAGAAGCCCTCCTTGTAGGCACCATTCGATTGCCCCTTGCTTTTGACGT
ACTCGTCCTCCATCACCGGCATGCAAGCCCCAGTATTGCAACCGTTTGCA
ATCAGGGCGTCACCCTCTCCAAGATGCTTGCTGTGCCCATTCGAAGCCGA
GCCGTTGGCATAGCCATTGGCCTTGACCGCCTGCCGGCGACGTCGAGCTG
CGTTGAGATATTTCGCTTTGTAAAAGTCGGAGAACAGGAACAGGAACATA
ACGCCGTGCAATCCGATCCAGACCATGAAGCCCTTGGGGTAATCACATTC
GCGGAACAAAAGCTGGAACTGGTGGGTGAAAATGGCCACGAATTGAACCA
TTTGGAAGGTGGTCAGGTACTTCTTCCACCAGATGTACTTCTGGTACTTT
GGACCCATGGCGGCGATCATGTAGTAGAAATACATTACAATGTGCACAAA
CGAGTTGAGAAGGGCAAAGAAAGTGCTATGACCGCCTGGCGCAAACTTCA
GACCCATCCAGACGGAGAACGGCATGCAGCCGTGATGGATGACGTGTAGT
GTGGAGACGTGCTCGTTCTTTTTTCGCAGAATGAAGAAGAGTGTGTCGAA
GAACTCGGTGAACTTAGATATGTAGTACCACCAGCAAATGTTGACCATCC
GCATGGCCAAGCCAGTGGTGCTATAGTCAACGGGCTGACACTTTAAGCTG
TAGTGGCCCCACCATCCGCTCATTAAGTACTCATAAAAGATCCACGCGCT
AAATATTGTTTGTATCGCGTTGTATACAACTAAAACAGATCGCAACTCCA
TCGGTTTCCCGTTTGGCCATCAGCCTGGGCCCCAGGGGATTTGCTGAAGT
AGGC

BS07432.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-PC 1065 CG31523-RC 173..1065 909..17 4465 100 Minus
CG31523-PB 1065 CG31523-RB 173..1065 909..17 4465 100 Minus
CG31523-PA 1065 CG31523-RA 173..1065 909..17 4465 100 Minus
CG31523-PD 1065 CG31523-RD 173..1065 909..17 4465 100 Minus
CG31522-PA 1095 CG31522-RA 552..620 527..459 195 91.3 Minus
CG31522-PD 1098 CG31522-RD 555..623 527..459 195 91.3 Minus
CG31522-PB 1098 CG31522-RB 555..623 527..459 195 91.3 Minus
CG31523-PC 1065 CG31523-RC 146..174 937..909 145 100 Minus
CG31523-PB 1065 CG31523-RB 146..174 937..909 145 100 Minus
CG31523-PA 1065 CG31523-RA 146..174 937..909 145 100 Minus
CG31523-PD 1065 CG31523-RD 146..174 937..909 145 100 Minus
CG31522-PA 1095 CG31522-RA 425..458 654..621 145 97 Minus
CG31522-PD 1098 CG31522-RD 428..461 654..621 145 97 Minus
CG31522-PB 1098 CG31522-RB 428..461 654..621 145 97 Minus
CG2781-PA 990 CG2781-RA 343..386 736..693 145 93.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 12:10:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 2585 CG31523-RF 380..1315 954..17 4640 99.8 Minus
CG31523-RE 3232 CG31523-RE 1027..1962 954..17 4640 99.8 Minus
CG31523-RG 2576 CG31523-RG 371..1306 954..17 4640 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 12:10:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4467294..4467573 170..449 1400 100 Plus
3R 32079331 3R 4467843..4468007 585..749 825 100 Plus
3R 32079331 3R 4466691..4466844 17..170 770 100 Plus
3R 32079331 3R 4467630..4467771 447..588 710 100 Plus
3R 32079331 3R 4468214..4468336 830..954 525 98.4 Plus
3R 32079331 3R 4468066..4468148 749..831 415 100 Plus
3R 32079331 3R 7982860..7983134 462..736 415 76.7 Plus
3R 32079331 3R 4444122..4444251 459..588 335 83.8 Plus
3R 32079331 3R 22555672..22555780 561..453 290 84.4 Minus
Blast to na_te.dros performed on 2015-02-03 12:10:05 has no hits.

BS07432.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:12:39 Download gff for BS07432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PB 130..1065 17..954 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:02:44 Download gff for BS07432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PD 130..1065 17..954 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:47:07 Download gff for BS07432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RD 239..1179 12..954 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:39:00 Download gff for BS07432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RG 371..1311 12..954 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:39:00 Download gff for BS07432.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4467632..4467768 449..585 100 <- Plus
3R 4466686..4466843 12..169 98 <- Plus
3R 4467294..4467572 170..448 100 <- Plus
3R 4467844..4468006 586..748 100 <- Plus
3R 4468066..4468146 749..829 100 <- Plus
3R 4468214..4468336 830..954 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:47:07 Download gff for BS07432.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 292408..292565 12..169 98 <- Plus
arm_3R 293016..293294 170..448 100 <- Plus
arm_3R 293354..293490 449..585 100 <- Plus
arm_3R 293566..293728 586..748 100 <- Plus
arm_3R 293788..293868 749..829 100 <- Plus
arm_3R 293936..294058 830..954 98   Plus

BS07432.5prime Sequence

959 bp (791 high quality bases) assembled on 2006-01-06

> BS07432.5prime
GAAGTTATCAGTCGACATGGCAATCATACTGCAAGAAGCCCAGAAGTGGT
ATCGGGACCTAATGGACAATAAAAGCGATCCTCGCGTTAACGACTTCTTT
CTGCTATCCTCGCCACTGCCCACACTTTGTATGTGCATATTCTATGCCTA
CTTCAGCAAATCCCTGGGGCCCAGGCTGATGGCCAAACGGAAACCGATGG
AGTTGCGATCTGTTTTAGTTGTATACAACGCGATACAAACAATATTTAGC
GCGTGGATCTTTTATGAGTACTTAATGAGCGGATGGTGGGGCCACTACAG
CTTAAAGTGTCAGCCCGTTGACTATAGCACCACTGGCTTGGCCATGCGGA
TGGTCAACATTTGCTGGTGGTACTACATATCTAAGTTCACCGAGTTCTTC
GACACACTCTTCTTCATTCTGCGAAAAAAGAACGAGCACGTCTCCACACT
ACACGTCATCCATCACGGCTGCATGCCGTTCTCCGTCTGGATGGGTCTGA
AGTTTGCGCCAGGCGGTCATAGCACTTTCTTTGCCCTTCTCAACTCGTTT
GTGCACATTGTAATGTATTTCTACTACATGATCGCCGCCATGGGTCCAAA
GTACCAGAAGTACATCTGGTGGAAGAAGTACCTGACCACCTTCCAAATGG
TTCAATTCGTGGCCATTTTCACCCACCAGTTCCAGCTTTTGTTCCGCGAA
TGTGATTACCCCAAGGGCTTCATGGTCTGGATCGGATTGCACGGCGTTAT
GTTCCTGTTCCTGTTCTCCGACTTTTACAAAGCGAAATATCTCAACGCAG
CTCGACGTCGCCGGCAGGCGGTCAAGGCCAATGGCTATGCCAACGGCTCG
GCTTCGAATGGGCACAGCAAGCATCTTGGAGAGGGTGACGCCCTGATTGC
AAACGTTGCAATACTGGGGGCTGCATGCCGGTGATGGAGGACGAGTACGT
CAAAAGCAA

BS07432.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-PC 1065 CG31523-RC 1..889 17..905 4445 100 Plus
CG31523-PB 1065 CG31523-RB 1..889 17..905 4445 100 Plus
CG31523-PA 1065 CG31523-RA 1..889 17..905 4445 100 Plus
CG31523-PD 1065 CG31523-RD 1..889 17..905 4445 100 Plus
CG31523-PC 1065 CG31523-RC 890..944 905..959 225 96.3 Plus
CG31523-PB 1065 CG31523-RB 890..944 905..959 225 96.3 Plus
CG31523-PA 1065 CG31523-RA 890..944 905..959 225 96.3 Plus
CG31523-PD 1065 CG31523-RD 890..944 905..959 225 96.3 Plus
CG31522-PA 1095 CG31522-RA 552..620 571..639 195 91.3 Plus
CG31522-PD 1098 CG31522-RD 555..623 571..639 195 91.3 Plus
CG31522-PB 1098 CG31522-RB 555..623 571..639 195 91.3 Plus
CG31522-PA 1095 CG31522-RA 425..458 444..477 145 97 Plus
CG31522-PD 1098 CG31522-RD 428..461 444..477 145 97 Plus
CG31522-PB 1098 CG31522-RB 428..461 444..477 145 97 Plus
CG2781-PA 990 CG2781-RA 343..386 362..405 145 93.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 2585 CG31523-RF 251..1194 17..959 4665 99.7 Plus
CG31523-RE 3232 CG31523-RE 898..1841 17..959 4665 99.7 Plus
CG31523-RG 2576 CG31523-RG 242..1185 17..959 4665 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4467294..4467573 927..649 1320 98.9 Minus
3R 32079331 3R 4468214..4468405 268..77 960 100 Minus
3R 32079331 3R 4467843..4468007 513..349 825 100 Minus
3R 32079331 3R 4467630..4467771 651..510 710 100 Minus
3R 32079331 3R 4468066..4468148 349..267 415 100 Minus
3R 32079331 3R 7982860..7983134 636..362 415 76.7 Minus
3R 32079331 3R 4444122..4444251 639..510 335 83.8 Minus
3R 32079331 3R 4468464..4468524 77..17 305 100 Minus
3R 32079331 3R 22555672..22555780 537..645 290 84.4 Plus
Blast to na_te.dros performed on 2015-02-04 01:49:03 has no hits.

BS07432.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:12:40 Download gff for BS07432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PB 1..942 17..957 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:02:45 Download gff for BS07432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PB 1..942 17..957 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:44:39 Download gff for BS07432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RD 103..1051 9..957 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:32:10 Download gff for BS07432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RG 235..1183 9..957 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:32:10 Download gff for BS07432.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4466814..4466843 928..957 100 <- Minus
3R 4467294..4467572 650..927 98 <- Minus
3R 4467632..4467768 513..649 100 <- Minus
3R 4467844..4468006 350..512 100 <- Minus
3R 4468066..4468146 269..349 100 <- Minus
3R 4468214..4468404 78..268 100 <- Minus
3R 4468464..4468531 9..77 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:44:39 Download gff for BS07432.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 294186..294253 9..77 94   Minus
arm_3R 293566..293728 350..512 100 <- Minus
arm_3R 293788..293868 269..349 100 <- Minus
arm_3R 293936..294126 78..268 100 <- Minus
arm_3R 292536..292565 928..957 100 <- Minus
arm_3R 293016..293294 650..927 98 <- Minus
arm_3R 293354..293490 513..649 100 <- Minus

BS07432.complete Sequence

1097 bp (1097 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635860

> BS07432.complete
GAAGTTATCAGTCGACATGGCAATCATACTGCAAGAAGCCCAGAAGTGGT
ATCGGGACCTAATGGACAATAAAAGCGATCCTCGCGTTAACGACTTCTTT
CTGCTATCCTCGCCACTGCCCACACTTTGTATGTGCATATTCTATGCCTA
CTTCAGCAAATCCCTGGGGCCCAGGCTGATGGCCAAACGGAAACCGATGG
AGTTGCGATCTGTTTTAGTTGTATACAACGCGATACAAACAATATTTAGC
GCGTGGATCTTTTATGAGTACTTAATGAGCGGATGGTGGGGCCACTACAG
CTTAAAGTGTCAGCCCGTTGACTATAGCACCACTGGCTTGGCCATGCGGA
TGGTCAACATTTGCTGGTGGTACTACATATCTAAGTTCACCGAGTTCTTC
GACACACTCTTCTTCATTCTGCGAAAAAAGAACGAGCACGTCTCCACACT
ACACGTCATCCATCACGGCTGCATGCCGTTCTCCGTCTGGATGGGTCTGA
AGTTTGCGCCAGGCGGTCATAGCACTTTCTTTGCCCTTCTCAACTCGTTT
GTGCACATTGTAATGTATTTCTACTACATGATCGCCGCCATGGGTCCAAA
GTACCAGAAGTACATCTGGTGGAAGAAGTACCTGACCACCTTCCAAATGG
TTCAATTCGTGGCCATTTTCACCCACCAGTTCCAGCTTTTGTTCCGCGAA
TGTGATTACCCCAAGGGCTTCATGGTCTGGATCGGATTGCACGGCGTTAT
GTTCCTGTTCCTGTTCTCCGACTTTTACAAAGCGAAATATCTCAACGCAG
CTCGACGTCGCCGGCAGGCGGTCAAGGCCAATGGCTATGCCAACGGCTCG
GCTTCGAATGGGCACAGCAAGCATCTTGGAGAGGGTGACGCCCTGATTGC
AAACGGTTGCAATACTGGGGCTTGCATGCCGGTGATGGAGGACGAGTACG
TCAAAAGCAAGGGGCAATCGAATGGTGCCTACAAGGAGGGCTTCTTCAAG
GAGGGCGTGTTATCCAACAACGATGCCATCTTCAACCCGGACAGCAGTAG
TTCTAGTCTGCACCAGCGCAAAGTCAAATAAAAGCTTTCTAGACCAT

BS07432.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 1065 CG31523-PF 1..1065 17..1081 5325 100 Plus
CG31523-RE 1065 CG31523-PE 1..1065 17..1081 5325 100 Plus
CG31523-RG 1065 CG31523-PG 1..1065 17..1081 5325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 2585 CG31523-RF 251..1315 17..1081 5325 100 Plus
CG31523-RE 3232 CG31523-RE 898..1962 17..1081 5325 100 Plus
CG31523-RG 2576 CG31523-RG 242..1306 17..1081 5325 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4467294..4467573 928..649 1400 100 Minus
3R 32079331 3R 4468214..4468405 268..77 960 100 Minus
3R 32079331 3R 4467843..4468007 513..349 825 100 Minus
3R 32079331 3R 4466691..4466844 1081..928 770 100 Minus
3R 32079331 3R 4467630..4467771 651..510 710 100 Minus
3R 32079331 3R 4468066..4468148 349..267 415 100 Minus
3R 32079331 3R 7982860..7983134 636..362 415 76.7 Minus
3R 32079331 3R 4444122..4444251 639..510 335 83.8 Minus
3R 32079331 3R 4468464..4468524 77..17 305 100 Minus
3R 32079331 3R 22555672..22555780 537..645 290 84.4 Plus
Blast to na_te.dros performed on 2014-11-27 14:04:53 has no hits.

BS07432.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:52 Download gff for BS07432.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RA 1..1065 17..1081 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:43 Download gff for BS07432.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RA 555..1631 9..1086 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:33:02 Download gff for BS07432.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RD 110..1172 17..1079 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:53 Download gff for BS07432.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RA 555..1631 9..1086 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:50 Download gff for BS07432.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RG 242..1304 17..1079 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:50 Download gff for BS07432.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4466693..4466843 929..1079 100 <- Minus
3R 4467294..4467572 650..928 100 <- Minus
3R 4467632..4467768 513..649 100 <- Minus
3R 4467844..4468006 350..512 100 <- Minus
3R 4468066..4468146 269..349 100 <- Minus
3R 4468214..4468404 78..268 100 <- Minus
3R 4468464..4468524 17..77 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:33:02 Download gff for BS07432.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 292415..292565 929..1079 100 <- Minus
arm_3R 293016..293294 650..928 100 <- Minus
arm_3R 293354..293490 513..649 100 <- Minus
arm_3R 293566..293728 350..512 100 <- Minus
arm_3R 293788..293868 269..349 100 <- Minus
arm_3R 293936..294126 78..268 100 <- Minus
arm_3R 294186..294246 17..77 100   Minus

BS07432.pep Sequence

Translation from 16 to 1080

> BS07432.pep
MAIILQEAQKWYRDLMDNKSDPRVNDFFLLSSPLPTLCMCIFYAYFSKSL
GPRLMAKRKPMELRSVLVVYNAIQTIFSAWIFYEYLMSGWWGHYSLKCQP
VDYSTTGLAMRMVNICWWYYISKFTEFFDTLFFILRKKNEHVSTLHVIHH
GCMPFSVWMGLKFAPGGHSTFFALLNSFVHIVMYFYYMIAAMGPKYQKYI
WWKKYLTTFQMVQFVAIFTHQFQLLFRECDYPKGFMVWIGLHGVMFLFLF
SDFYKAKYLNAARRRRQAVKANGYANGSASNGHSKHLGEGDALIANGCNT
GACMPVMEDEYVKSKGQSNGAYKEGFFKEGVLSNNDAIFNPDSSSSSLHQ
RKVK*

BS07432.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-PF 354 CG31523-PF 1..354 1..354 1929 100 Plus
CG31523-PE 354 CG31523-PE 1..354 1..354 1929 100 Plus
CG31523-PG 354 CG31523-PG 1..354 1..354 1929 100 Plus
CG31523-PD 354 CG31523-PD 1..354 1..354 1929 100 Plus
CG31523-PA 354 CG31523-PA 1..354 1..354 1929 100 Plus