Clone Sequence Records
BS07455.3prime Sequence
953 bp (811 high quality bases) assembled on 2006-01-06
> BS07455.3prime
ATGGTCTAGAAAGCTTTTATTTTTTACAGTTCTTATTAAGATAAAAAACA
AAGCGTGAAAAATTAGTCTTCACTGTTTGCACTGTGGCTCGTCGCTCCTT
TAGCTCCCGTCGCTGCTGCCGCAGTTTAGACTTGAACAACTCCTCTAGTG
CCTGGACACGATCGCACATCTCCAACTCCGCGATGATCTGCGGCCAGTCG
TCCACTGCGAAAATGTCCATTAGTGCATCTAGTCCTTCAGACAGGGCCCA
CAGGTCATCTTCCTGGGCACAGTAAGTCAATAGGAAGAGCACTATTGCCT
TAACCAGGGGCTCTGAGAGCAGAGAACCCAGCGTACCCAGCATGCGGTTC
CAGTTAACGCGAATATTTATATCTGTGCACTTGCTAGCGCCCTCGATAAT
CATGTTGAGATCATTCTCGGTCATCTGGCCGAAAAGATCCTTGCGAGACT
TGAGCAAACTCAGCGAGGAGCGCATTAGTGACGTAATGGCCTCCATAACG
GATACATCTTCACTTCCCCTAAATGCTTGTTGACCCAAGATCATCCACAT
GTTATAGAGGTTGCTGCAGCCCCCCAAATCTTCAGGGGGCAGCACATTGC
ATAGGTTCTGGAGGCAAATCAAGTATGATACTCTTAATTTTTCCACTTTC
TCCTTGATATTCTCTTGCTGGGACACAAGATTTTCCACAGCAGGTTGCAG
TGGTTGAGCCTTTTGCCATAGTTTCTCGATCACTTTGTTTTGTTTGATAG
TCTCCAAGAAGTTGGCGGGCAGTCCCCCCGATCCACTGTCAGCTGTCTCG
TCCTCCATGTCGTAATCGGCCACGCTCTCAGACTCTGAATGCTCGCTATC
TGTATCCCAGTTGCTCTGTTCATCGCTGGAGCCCAGGTTGGTTATAATCT
CCGCTACCAGGCGCTGGGCATCTAGCAAGTGCTCGAGGTTCTTGAGTGCT
ACC
BS07455.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-PA | 1878 | CG10286-RA | 942..1878 | 953..17 | 4685 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:57:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 2151 | CG10286-RA | 994..1931 | 953..16 | 4690 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:57:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6369958..6370895 | 953..16 | 4690 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:57:33 has no hits.
BS07455.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:23 Download gff for
BS07455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 942..1878 | 17..953 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:03:44 Download gff for
BS07455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 942..1878 | 17..953 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:57:43 Download gff for
BS07455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 994..1933 | 11..953 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:54:45 Download gff for
BS07455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 994..1933 | 11..953 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:54:45 Download gff for
BS07455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6369958..6370897 | 11..953 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:57:43 Download gff for
BS07455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2195680..2196619 | 11..953 | 99 | | Minus |
BS07455.5prime Sequence
897 bp (856 high quality bases) assembled on 2006-01-06
> BS07455.5prime
GAAGTTATCAGTCGACATGGGAAAAGTTCGAAAAGTAAAAACACGGACGC
CATCCGGCGTGGACACCTCGGCGGAAATCGATGTGGAATCAGCGGGCGAA
GCGGAGGGCTGCGGACCCATCGAGGCGATTTGCGTTCACCTGCAGCAGGC
GAACGTGGAGGAGAAGCTGAACGGACTGCACTCATTCGCCGTGCTGGCGC
TGCGAAAGGAGAAGGTTCCCGAAATACGCGACAGCGAGTTGGTCCGGATT
GCGGCCCCCCTGCTGTGCGATAAGGAGAGCGCCATCCGGAATGCGGCGGC
CGGTGCCTTTCGGAATTTGTCGGTGTTTGGCACGGAGGTGTGCGACTTCC
TCGTTGAGAACGACATACTGACCGCCCTGCTGACTCTGGTCCGTAGCTAT
GATCTGACAAAAGGTGGATTCGAAAACGAGCTGCATGCGGACACCTTCCA
GCAAGCAATCCATCTGCTCCGAAATCTGTGCGAGAGCTCGCCCACCGCCA
CAGAAGCACTAAATCAGGCCAACTTTCTTTCCAGCCTGCTGCTGGGCTTC
GACTACAGAAAGTTCGGACTCGAAGTTGCCATTTCAGTGGCCCAACTCGT
ATTGGTGGTGTCTGAGAACAACTCCAGCTCGTGGAACGTCCTGGCCAGCA
GTACAATACTACCTGAGCTTCTTGTGGCTCCCACAGAAAGTCACGCGCAG
CTTTACCTGAACGCCTTAGCTGCTGGTATCCTATGCAATGTACCCGCATG
CGCGGCCGCCCACACTCGGGAAATCCTGAACAGTCTGGACAAACTACTCT
CCATAGATCCACAGGCCCAGCTGCAAAGCTGCAAAAGCGAAATTCTAAAT
GCAAAGTCGAAGAACGAGGCCCCCGTGCTGGAAATCTCCATGGAGAC
BS07455.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-PA | 1878 | CG10286-RA | 1..881 | 17..897 | 4405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 2151 | CG10286-RA | 53..933 | 17..897 | 4405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6369017..6369897 | 17..897 | 4405 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:07:13 has no hits.
BS07455.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:24 Download gff for
BS07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 1..881 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:03:46 Download gff for
BS07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 1..881 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:57:09 Download gff for
BS07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..933 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:56:02 Download gff for
BS07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..933 | 17..897 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:56:02 Download gff for
BS07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6369017..6369897 | 17..897 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:57:09 Download gff for
BS07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2194739..2195619 | 17..897 | 100 | | Plus |
BS07455.complete Sequence
1910 bp assembled on 2008-01-02
GenBank Submission: FJ635869
> BS07455.complete
GAAGTTATCAGTCGACATGGGAAAAGTTCGAAAAGTAAAAACACGGACGC
CATCCGGCGTGGACACCTCGGCGGAAATCGATGTGGAATCAGCGGGCGAA
GCGGAGGGCTGCGGACCCATCGAGGCGATTTGCGTTCACCTGCAGCAGGC
GAACGTGGAGGAGAAGCTGAACGGACTGCACTCATTCGCCGTGCTGGCGC
TGCGAAAGGAGAAGGTTCCCGAAATACGCGACAGCGAGTTGGTCCGGATT
GCGGCCCCCCTGCTGTGCGATAAGGAGAGCGCCATCCGGAATGCGGCGGC
CGGTGCCTTTCGGAATTTGTCGGTGTTTGGCACGGAGGTGTGCGACTTCC
TCGTTGAGAACGACATACTGACCGCCCTGCTGACTCTGGTCCGTAGCTAT
GATCTGACAAAAGGTGGATTCGAAAACGAGCTGCATGCGGACACCTTCCA
GCAAGCAATCCATCTGCTCCGAAATCTGTGCGAGAGCTCGCCCACCGCCA
CAGAAGCACTAAATCAGGCCAACTTTCTTTCCAGCCTGCTGCTGGGCTTC
GACTACAGAAAGTTCGGACTCGAAGTTGCCATTTCAGTGGCCCAACTCGT
ATTGGTGGTGTCTGAGAACAACTCCAGCTCGTGGAACGTCCTGGCCAGCA
GTACAATACTACCTGAGCTTCTTGTGGCTCCCACAGAAAGTCACGCGCAG
CTTTACCTGAACGCCTTAGCTGCTGGTATCCTATGCAATGTACCCGCATG
CGCGGCCGCCCACACTCGGGAAATCCTGAACAGTCTGGACAAACTACTCT
CCATAGATCCACAGGCCCAGCTGCAAAGCTGCAAAAGCGAAATTCTAAAT
GCAAAGTCGAAGAACGAGGCCCCCGTGCTGGAAATCTCCATGGAGACAGA
GGATATGACGGAAACACAGAGTGCCAATCAGTCGAAACCTAACCAATGCG
ATGCCGAGGTAGCACTCAAGAACCTCGAGCACTTGCTAGATGCCCAGCGC
CTGGTAGCGGAGATTATAACCAACCTGGGCTCCAGCGATGAACAGAGCAA
CTGGGATACAGATAGCGAGCATTCAGAGTCTGAGAGCGTGGCCGATTACG
ACATGGAGGACGAGACAGCTGACAGTGGATCGGGGGGACTGCCCGCCAAC
TTCTTGGAGACTATCAAACAAAACAAAGTGATCGAGAAACTATGGCAAAA
GGCTCAACCACTGCAACCTGCTGTGGAAAATCTTGTGTCCCAGCAAGAGA
ATATCAAGGAGAAAGTGGAAAAATTAAGAGTATCATACTTGATTTGCCTC
CAGAACCTATGCAATGTGCTGCCCCCTGAAGATTTGGGGGGCTGCAGCAA
CCTCTATAACATGTGGATGATCTTGGGTCAACAAGCATTTAGGGGAAGTG
AAGATGTATCCGTTATGGAGGCCATTACGTCACTAATGCGCTCCTCGCTG
AGTTTGCTCAAGTCTCGCAAGGATCTTTTCGGCCAGATGACCGAGAATGA
TCTCAACATGATTATCGAGGGCGCTAGCAAGTGCACAGATATAAATATTC
GCGTTAACTGGAACCGCATGCTGGGTACGCTGGGTTCTCTGCTCTCAGAG
CCCCTGGTTAAGGCAATAGTGCTCTTCCTATTGACTTACTGTGCCCAGGA
AGATGACCTGTGGGCCCTGTCTGAAGGACTAGATGCACTAATGGACATTT
TCGCAGTGGACGACTGGCCGCAGATCATCGCGGAGTTGGAGATGTGCGAT
CGTGTCCAGGCACTAGAGGAGTTGTTCAAGTCTAAACTGCGGCAGCAGCG
ACGGGAGCTAAAGGAGCGACGAGCCACAGTGCAAACAGTGAAGACTAATT
TTTCACGCTTTGTTTTTTATCTTAATAAGAACTGTAAAAAATAAAAGCTT
TCTAGACCAT
BS07455.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 1878 | CG10286-PA | 1..1878 | 17..1894 | 9390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 2151 | CG10286-RA | 53..1931 | 17..1895 | 9395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:50:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6369017..6370895 | 17..1895 | 9395 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:50:21 has no hits.
BS07455.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:07:32 Download gff for
BS07455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 1..1878 | 17..1894 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:31:43 Download gff for
BS07455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 64..1932 | 17..1885 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:46:24 Download gff for
BS07455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..1921 | 17..1885 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:07:32 Download gff for
BS07455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 64..1944 | 17..1900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:49 Download gff for
BS07455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..1921 | 17..1885 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:49 Download gff for
BS07455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6369017..6370885 | 17..1885 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:46:24 Download gff for
BS07455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2194739..2196607 | 17..1885 | 100 | | Plus |
BS07455.pep Sequence
Translation from 16 to 1893
> BS07455.pep
MGKVRKVKTRTPSGVDTSAEIDVESAGEAEGCGPIEAICVHLQQANVEEK
LNGLHSFAVLALRKEKVPEIRDSELVRIAAPLLCDKESAIRNAAAGAFRN
LSVFGTEVCDFLVENDILTALLTLVRSYDLTKGGFENELHADTFQQAIHL
LRNLCESSPTATEALNQANFLSSLLLGFDYRKFGLEVAISVAQLVLVVSE
NNSSSWNVLASSTILPELLVAPTESHAQLYLNALAAGILCNVPACAAAHT
REILNSLDKLLSIDPQAQLQSCKSEILNAKSKNEAPVLEISMETEDMTET
QSANQSKPNQCDAEVALKNLEHLLDAQRLVAEIITNLGSSDEQSNWDTDS
EHSESESVADYDMEDETADSGSGGLPANFLETIKQNKVIEKLWQKAQPLQ
PAVENLVSQQENIKEKVEKLRVSYLICLQNLCNVLPPEDLGGCSNLYNMW
MILGQQAFRGSEDVSVMEAITSLMRSSLSLLKSRKDLFGQMTENDLNMII
EGASKCTDINIRVNWNRMLGTLGSLLSEPLVKAIVLFLLTYCAQEDDLWA
LSEGLDALMDIFAVDDWPQIIAELEMCDRVQALEELFKSKLRQQRRELKE
RRATVQTVKTNFSRFVFYLNKNCKK*
BS07455.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:18:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-PA | 625 | CG10286-PA | 1..625 | 1..625 | 3156 | 100 | Plus |
