Clone Sequence Records
BS07460.3prime Sequence
952 bp (802 high quality bases) assembled on 2006-01-06
> BS07460.3prime
ATGGTCTAGAAAGCTTCTAACTCCCTGCGTTCGTCTGCTCCACGGCACGT
ATTTGCTCCTGGAGCTCCTGGATATGCTGCTCGAACTTCTGGATATCGCC
GGTGATCTGCTGCAGACTGGTCAGCACGTTCTTCAGTTTCTCCCCATCGA
TTTGGACCTCAAGTTCGCGGATCTGCTTGGTCACGTTTCCCGTGAGGGAG
ACGCACTCGACCAGCTCATTGCAATTGGCGTGCAGTTGGGCCAGTAGCTT
GTAGGCCCGCTTCGCGTGGAGATCATGCTTGGCGCTCTGGAAGAGCAGGT
CGTCCGTGTAGTTGAACTGGCGCTGCAACTGGGCACCCACGACATTAAGC
TGCTTTTGGAGTTGTCGCGTGTCATCCAGAACTTTGTAGATATCCGCTCG
TTGCTTGCGTATGTTCCCGATGAATTCATGTATCCTGCGGGTGTACTCCT
TGCGAGGTGCCAAGGACTGACTGGCGCTACGCAGGGTGGCATTAAGTTCG
TTGTGCTGTTGGGTCTTGGCCAGAAGCTCCTGCTCCAGCTGCTCGATGCT
GTTGCGAATGCCCTGGACCTCCTGAGCCTCCTTGGCGGTCTTTAGTTTCT
CTAGGCTTTCCAGCAGCGGTTTCCTGTAATCCTGCCACTGCTGGGTAAGC
GTGAGCCTTTTGCTTTGCGTGGATTTTAGCAGGGCCTCCAGTTTGGCCAG
GTTTTCCTCGGAATCGGCGAGAACCAAGGAGGTGCGTTCGTGCAGTTTAA
GCGTGGGCTGAATGCGACTGATCTCCTCTCTCGCTTTAGTTTCCCGCTGT
TTCAGAGCTGCAATGGCAACAGCATGTGCTTTGCGTTCCGCTAGCAGGTT
TTCGCATTGGACTCGCAACTCCTGGACTTGGTCGCTCAGTTCTTGGATGG
GTGAAGGCTCCTCCTCCTTCTCCGCACTGGCGGGCGGTTTTACGGTCGGA
AT
BS07460.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9951-PA | 1668 | CG9951-RA | 733..1668 | 952..17 | 4680 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:07:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9951-RA | 1826 | CG9951-RA | 815..1750 | 952..17 | 4680 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:07:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16863978..16864913 | 952..17 | 4680 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:07:11 has no hits.
BS07460.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:32 Download gff for
BS07460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-PA | 733..1668 | 17..952 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:03:55 Download gff for
BS07460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-PA | 733..1668 | 17..952 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:52:18 Download gff for
BS07460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 815..1750 | 17..952 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:38:59 Download gff for
BS07460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 815..1750 | 17..952 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:38:59 Download gff for
BS07460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16863978..16864913 | 17..952 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:52:18 Download gff for
BS07460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16857078..16858013 | 17..952 | 100 | | Minus |
BS07460.5prime Sequence
820 bp (757 high quality bases) assembled on 2006-01-06
> BS07460.5prime
GAAGTTATCAGTCGACATGGACGAAGTGGACAAGATAATCATGCACCAGC
TGCACCAGGTGGACGCGACCATCGAGCCGACGGATGAGCTGTCCGACTTC
ACCCCGGAACAGGTGGTGCGAGCAGTCTCCGGCTGTCTGGCGGAGATTCG
TCCAGACTTGCAGCTTCCACGCACTCTCCCCGGCGGAGCGATGGCCCAGC
GCTTCGGAGTGGCCAGCTCCTTGGCGCAGGGTTGCAAGGATAGCGGTTAC
CGAGGCGATATTGGTTATCAGACCTTTTTGTATCCCAATGCCGTGGAATT
GCGGCGACTGCTAATGTTTCTCATCGAACAACTTCCGCGGGAGCGTCAAG
GCACAGAGGACGGTGCCAGCAAGTCGCAAACCCTGAGCCACAGGCAACTC
CTGGAGCGGAAGATCCGAAAGGAGCTCGCCCAACAACTGAAGACACCCTG
GGTCCCACAGTTTGCCCGGTCCGTGGGCAATCGTAAATTACTCGGTTGCA
GTAGCCTGGGCATTGAATTTCGACCAAACATCAATCTCAACATTCCATCC
GCCAATCCCGAGGAGCGTTCCAAGGAGCAGCAGCAGTATCTCGACCAACA
GGCACCCAATCTCTTCCAGCAAACATCCTCCACCTCGACGGATCTCATTG
CCTCCGTGCTGCACAAGAATGAGCTGGACAGGTGGGGCCAGATATTGCCG
GATTCAACACTTATCTTTGTGAGCAGCGAGGATCCAGCGCCGCCCCTGAT
TCCGACCGTAAAACCGCCCGCCAGTGCGGAGAAGGAGGAGGAGCCTTCAC
CCATCCAAGAACTGAGCGAC
BS07460.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9951-PA | 1668 | CG9951-RA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:22:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9951-RA | 1826 | CG9951-RA | 82..886 | 16..820 | 4025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:22:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16863245..16864049 | 16..820 | 4025 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:22:31 has no hits.
BS07460.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:33 Download gff for
BS07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-PA | 1..804 | 17..820 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:03:56 Download gff for
BS07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-PA | 1..804 | 17..820 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:02:42 Download gff for
BS07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 75..886 | 10..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:10:06 Download gff for
BS07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 75..886 | 10..820 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:10:06 Download gff for
BS07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16863238..16864049 | 10..820 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:02:42 Download gff for
BS07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16856338..16857149 | 10..820 | 99 | | Plus |
BS07460.complete Sequence
1700 bp (1700 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635873
> BS07460.complete
GAAGTTATCAGTCGACATGGACGAAGTGGACAAGATAATCATGCACCAGC
TGCACCAGGTGGACGCGACCATCGAGCCGACGGATGAGCTGTCCGACTTC
ACCCCGGAACAGGTGGTGCGAGCAGTCTCCGGCTGTCTGGCGGAGATTCG
TCCAGACTTGCAGCTTCCACGCACTCTCCCCGGCGGAGCGATGGCCCAGC
GCTTCGGAGTGGCCAGCTCCTTGGCGCAGGGTTGCAAGGATAGCGGTTAC
CGAGGCGATATTGGTTATCAGACCTTTTTGTATCCCAATGCCGTGGAATT
GCGGCGACTGCTAATGTTTCTCATCGAACAACTTCCGCGGGAGCGTCAAG
GCACAGAGGACGGTGCCAGCAAGTCGCAAACCCTGAGCCACAGGCAACTC
CTGGAGCGGAAGATCCGAAAGGAGCTCGCCCAACAACTGAAGACACCCTG
GGTCCCACAGTTTGCCCGGTCCGTGGGCAATCGTAAATTACTCGGTTGCA
GTAGCCTGGGCATTGAATTTCGACCAAACATCAATCTCAACATTCCATCC
GCCAATCCCGAGGAGCGTTCCAAGGAGCAGCAGCAGTATCTCGACCAACA
GGCACCCAATCTCTTCCAGCAAACATCCTCCACCTCGACGGATCTCATTG
CCTCCGTGCTGCACAAGAATGAGCTGGACAGGTGGGGCCAGATATTGCCG
GATTCAACACTTATCTTTGTGAGCAGCGAGGATCCAGCGCCGCCCCTGAT
TCCGACCGTAAAACCGCCCGCCAGTGCGGAGAAGGAGGAGGAGCCTTCAC
CCATCCAAGAACTGAGCGACCAAGTCCAGGAGTTGCGAGTCCAATGCGAA
AACCTGCTAGCGGAACGCAAAGCACATGCTGTTGCCATTGCAGCTCTGAA
ACAGCGGGAAACTAAAGCGAGAGAGGAGATCAGTCGCATTCAGCCCACGC
TTAAACTGCACGAACGCACCTCCTTGGTTCTCGCCGATTCCGAGGAAAAC
CTGGCCAAACTGGAGGCCCTGCTAAAATCCACGCAAAGCAAAAGGCTCAC
GCTTACCCAGCAGTGGCAGGATTACAGGAAACCGCTGCTGGAAAGCCTAG
AGAAACTAAAGACCGCCAAGGAGGCTCAGGAGGTCCAGGGCATTCGCAAC
AGCATCGAGCAGCTGGAGCAGGAGCTTCTGGCCAAGACCCAACAGCACAA
CGAACTTAATGCCACCCTGCGTAGCGCCAGTCAGTCCTTGGCACCTCGCA
AGGAGTACACCCGCAGGATACATGAATTCATCGGGAACATACGCAAGCAA
CGAGCGGATATCTACAAAGTTCTGGATGACACGCGACAACTCCAAAAGCA
GCTTAATGTCGTGGGTGCCCAGTTGCAGCGCCAGTTCAACTACACGGACG
ACCTGCTCTTCCAGAGCGCCAAGCATGATCTCCACGCGAAGCGGGCCTAC
AAGCTACTGGCCCAACTGCACGCCAATTGCAATGAGCTGGTCGAGTGCGT
CTCCCTCACGGGAAACGTGACCAAGCAGATCCGCGAACTTGAGGTCCAAA
TCGATGGGGAGAAACTGAAGAACGTGCTGACCAGTCTGCAGCAGATCACC
GGCGATATCCAGAAGTTCGAGCAGCATATCCAGGAGCTCCAGGAGCAAAT
ACGTGCCGTGGAGCAGACGAACGCAGGGAGTTAGAAGCTTTCTAGACCAT
BS07460.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9951-RA | 1668 | CG9951-PA | 1..1668 | 17..1684 | 8340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9951-RA | 1826 | CG9951-RA | 82..1750 | 16..1684 | 8345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16863245..16864913 | 16..1684 | 8345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:53:51 has no hits.
BS07460.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:36 Download gff for
BS07460.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 1..1668 | 17..1684 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:53:40 Download gff for
BS07460.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 75..1750 | 10..1684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:13 Download gff for
BS07460.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 83..1750 | 17..1684 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:36 Download gff for
BS07460.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 77..1752 | 10..1684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:09 Download gff for
BS07460.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9951-RA | 83..1750 | 17..1684 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:09 Download gff for
BS07460.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16863246..16864913 | 17..1684 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:13 Download gff for
BS07460.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16856346..16858013 | 17..1684 | 100 | | Plus |
BS07460.pep Sequence
Translation from 16 to 1683
> BS07460.pep
MDEVDKIIMHQLHQVDATIEPTDELSDFTPEQVVRAVSGCLAEIRPDLQL
PRTLPGGAMAQRFGVASSLAQGCKDSGYRGDIGYQTFLYPNAVELRRLLM
FLIEQLPRERQGTEDGASKSQTLSHRQLLERKIRKELAQQLKTPWVPQFA
RSVGNRKLLGCSSLGIEFRPNINLNIPSANPEERSKEQQQYLDQQAPNLF
QQTSSTSTDLIASVLHKNELDRWGQILPDSTLIFVSSEDPAPPLIPTVKP
PASAEKEEEPSPIQELSDQVQELRVQCENLLAERKAHAVAIAALKQRETK
AREEISRIQPTLKLHERTSLVLADSEENLAKLEALLKSTQSKRLTLTQQW
QDYRKPLLESLEKLKTAKEAQEVQGIRNSIEQLEQELLAKTQQHNELNAT
LRSASQSLAPRKEYTRRIHEFIGNIRKQRADIYKVLDDTRQLQKQLNVVG
AQLQRQFNYTDDLLFQSAKHDLHAKRAYKLLAQLHANCNELVECVSLTGN
VTKQIRELEVQIDGEKLKNVLTSLQQITGDIQKFEQHIQELQEQIRAVEQ
TNAGS*
BS07460.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9951-PA | 555 | CG9951-PA | 1..555 | 1..555 | 2793 | 100 | Plus |
