Clone Sequence Records
BS07464.complete Sequence
2159 bp assembled on 2010-07-15
GenBank Submission: KX801829
> BS07464.complete
GAAGTTATCAGTCGACATGGACAGGGATTCCTGCCAAAATTTCTCATTAG
ACTCCACGAGCAGTTCCCATTTTGCTCCTCCGCCAGTTTGCGCGCCCAGA
AGGAAGAAGCCGGAGAAGCCCGCAGCTGAGGAGGCATCTCCCGAATGCTC
CAACGTCACATCGTCATCCTCGTCCTCGACAACCACCATATCCATAGGCG
CCTTCGATTCGCAATGCAACCTCCACAACGCCCGGAATCCCGAGGCCCCG
AACATTGGCTATGAGTTGAACGTGGCCAAGTCCATATTGCAGAAGTATAG
CACCCTCAGTGGGGACAACTTGTTCGATCATCTTAGTGACATCATAAAGA
GGGTGATTGACGAACGTCCTCCGAATGTGATAGACTTCTTCGAGGAATTT
AGCCGAAATGTTCGCGAACAGAAGTTCCACTTGCCAGAACGCTTTCCGCC
CAGTGGCGTGTTCGATGAGGTGCGATCTTTCCGGGTGGCCAAGAAAATTC
TCCAATCCATGAAGCTGCCCTATGTCGTTGAGGGTGAGGATCTGATGGGC
GAAGACCTGTCCGTCGAGGATTTGAGAACGAACGAGGATATGCGCATTGT
CATCGACGATTCCATGCGATACTTCGTCACATTCAACGAGCGAGTCCAGC
AGCTGCAGTTCTATTGGACACAGTGCGGATTTAGCATCAGCAACGACGAC
ATCTTCCAGCTGGCCAGCGCCATGAACCGGCTGCAGACGCATCCCTCGAT
CATGCAATGCAGATTCTGGGGCTGCATCAACGGACTGAAGGCCTCTTACT
ACATAGTGGAAGCTTCGCTCACCCGCGAGGAAATCGCCTCGCGCTTGGTC
ATGATGGAGGAAGAGATGCGGCAGAAGCAGATTCCGTTCCCGATGCGCAA
GGACAGGGAGGACAAGCCACCGCCGGCGCACATTGGGCCGGAGCTCACAC
CGGGCATCTATGGCTGGGAGGAATTTCCGCCTGAGGAGCTCGAGAAGATG
AAGCCCAAGGCTGCGCCCGTTCCCCTGGTGGAGGAGATGGAGCTCTACGA
CATTCCACCGGAGTTCATTGGCAAGGGCTGCAATAGGTACTCCTATTTCG
TTGTGAACTCGCTATTTGACGACTGGATCGAACTACCTATAGTGACCCCT
CGACAGATTGTCGTTTCGCGGCAGATCAAGAAGTTCCTAACAGGCGATCT
GGAGGCGGATGTCATATCCTACCCCTGCTTCCCTGGAAAGGAGAAACATT
ACCTACGGACTCTGATAGGTCGCATCACAGCGGGTACCTACATCGCTCCT
GTGGGCTACTACAGGCGCATGACCAAGAAGGAGCAGCGGATGTTCGATGG
CGAGGAAGAAGAAGAGGGCGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGG
AGTTCAACGAAGGCGAGGAGGAGCAAATAGAAGATAACGACGTAATGCTT
TTGAAAAACGAGAAGTACGAGGCGGAACCACTGGGTTCTCTGGCCACCCC
GGTTGCTTGGGTTCATGTCAGGTCCAATATTCTGAACCAACAAGGCCGCG
TTGTCTGGTACGACGAGGAGAAGGCCCGCAAGGAGCGCGAAAAGGCACTG
GCCCTGTACCTGAAGATGCAGATGCTGGGCGAGATGGAAGAGGAGGTGGA
GGAGGAGGAGGATGAGGAAGAAGGCGAGGAGGAGGGCGAAGAAGAGGGCA
TGATCGAGGGCTTCAATCAGCCCGAACTGGGTCCCAGTATCCTCTCCTCC
TGTGCCAATGACATGAACCCCGAGGTGCCAGTTTCCTGGCTCGCCCGCAT
GACCAGCAAGTACACGAATCAGAAGGAGCGAATGCTCGTGATGCAGTCGA
ACGTCTGGCCAGGCGCCTACACGTTCATCTTTGAGAAGACCTGCGAGTCG
ATATACTTGGGCTGGGGCCACAAGTACTACGCCCGCAATATTCCCTTCAA
GCACTTGCCGATGGTGCAGGAGGAGTTCCCCCACAACCCAGAGGACTTCG
TCGAGGCCAACGATCCGACTGTCGAGGAGGAGGAAGCTTACAAGGCTTGG
CTCCTCCGGAAGCAGCAGAAGGCCGAGTATGTGGCCGAAGACATCGAAGA
CTACGATGATGACGAGTTCGCCGATCAGTATGACGACGACTGAAAGCTTT
CTAGACCAT
BS07464.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:46:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3121-RA | 2127 | CG3121-PA | 1..2127 | 17..2143 | 10635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:46:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3121-RA | 2284 | CG3121-RA | 94..2220 | 17..2143 | 10635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:46:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24018149..24019069 | 513..1433 | 4605 | 100 | Plus |
2R | 25286936 | 2R | 24019121..24019832 | 1432..2143 | 3560 | 100 | Plus |
2R | 25286936 | 2R | 24017514..24017820 | 17..323 | 1535 | 100 | Plus |
2R | 25286936 | 2R | 24017901..24018093 | 322..514 | 965 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:46:29 has no hits.
BS07464.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 09:48:34 Download gff for
BS07464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-RA | 94..2219 | 17..2142 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:23 Download gff for
BS07464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-RA | 94..2219 | 17..2142 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:36:40 Download gff for
BS07464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-RA | 94..2219 | 17..2142 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:36:40 Download gff for
BS07464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24017514..24017818 | 17..321 | 100 | -> | Plus |
2R | 24017901..24018093 | 322..514 | 100 | -> | Plus |
2R | 24018151..24019069 | 515..1433 | 100 | -> | Plus |
2R | 24019123..24019831 | 1434..2142 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:23 Download gff for
BS07464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19905037..19905341 | 17..321 | 100 | -> | Plus |
arm_2R | 19905424..19905616 | 322..514 | 100 | -> | Plus |
arm_2R | 19905674..19906592 | 515..1433 | 100 | -> | Plus |
arm_2R | 19906646..19907354 | 1434..2142 | 100 | | Plus |
BS07464.3prime Sequence
956 bp (760 high quality bases) assembled on 2006-01-06
> BS07464.3prime
ATGGTCTAGAAAGCTTTCAGTCGTCGTCATACTGATCGGCGAACTCGTCA
TCATCGTAGTCTTCGATGTCTTCGGCCACATACTCGGCCTTCTGCTGCTT
CCGGAGGAGCCAAGCCTTGTAAGCTTCCTCCTCCTCGACAGTCGGATCGT
TGGCCTCGACGAAGTCCTCTGGGTTGTGGGGGAACTCCTCCTGCACCATC
GGCAAGTGCTTGAAGGGAATATTGCGGGCGTAGTACTTGTGGCCCCAGCC
CAAGTATATCGACTCGCAGGTCTTCTCAAAGATGAACGTGTAGGCGCCTG
GCCAGACGTTCGACTGCATCACGAGCATTCGCTCCTTCTGATTCGTGTAC
TTGCTGGTCATGCGGGCGAGCCAGGAAACTGGCACCTCGGGGTTCATGTC
ATTGGCACAGGAGGAGAGGATACTGGGACCCAGTTCGGGCTGATTGAAGC
CCTCGATCATGCCCTCTTCTTCGCCCTCCTCCTCGCCTTCTTCCTCATCC
TCCTCCTCCTCCACCTCCTCTTCCATCTCGCCCAGCATCTGCATCTTCAG
GTACAGGGCCAGTGCCTTTTCGCGCTCCTTGCGGGCCTTCTCCTCGTCGT
ACCAGACAACGCGGCCTTGTTGGTTCAGAATATTGGACCTGACATGAACC
CAAGCAACCGGGGTGGCCAGAGAACCCAGTGGTTCCGCCTCGTACTTCTC
GTTTTTCAAAAGCATTACGTCGTTATCTTCTATTTGCTCCTCCTCGCCTT
CGTTGAACTCCTCCTCCTCTTCTTCCTCCTCCTCCTCCTCGCCCTCTTCT
TCTTCCTCGCCATCGAACATCCGCTGCTCCTTCTTGGTCATGCGCCTGTA
GTAGCCCACAGGAGCGATGTANGTACCCGCTGTGATGCGACCTATCAGAG
TCCGTAAGTAATGTTTCTCCTTTCCAGGGAAGCAGGGGTAGGATATGACA
TCCGCC
BS07464.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3121-PA | 2127 | CG3121-RA | 1188..2127 | 956..17 | 4656 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:58:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3121-RA | 2284 | CG3121-RA | 1281..2220 | 956..17 | 4674 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:58:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24019121..24019832 | 728..17 | 3560 | 100 | Minus |
2R | 25286936 | 2R | 24018840..24019069 | 956..727 | 1124 | 99.1 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:58:02 has no hits.
BS07464.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:38 Download gff for
BS07464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-PA | 1188..2127 | 17..956 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:04:04 Download gff for
BS07464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-PA | 1188..2127 | 17..956 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:00:01 Download gff for
BS07464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-RA | 1281..2223 | 11..956 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:11:53 Download gff for
BS07464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-RA | 1281..2223 | 11..956 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:11:53 Download gff for
BS07464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24018840..24019069 | 727..956 | 99 | -> | Minus |
2R | 24019123..24019835 | 11..726 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:00:01 Download gff for
BS07464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19906363..19906592 | 727..956 | 99 | -> | Minus |
arm_2R | 19906646..19907358 | 11..726 | 99 | | Minus |
BS07464.5prime Sequence
775 bp (774 high quality bases) assembled on 2006-01-06
> BS07464.5prime
GAAGTTATCAGTCGACATGGACAGGGATTCCTGCCAAAATTTCTCATTAG
ACTCCACGAGCAGTTCCCATTTTGCTCCTCCGCCAGTTTGCGCGCCCAGA
AGGAAGAAGCCGGAGAAGCCCGCAGCTGAGGAGGCATCTCCCGAATGCTC
CAACGTCACATCGTCATCCTCGTCCTCGACAACCACCATATCCATAGGCG
CCTTCGATTCGCAATGCAACCTCCACAACGCCCGGAATCCCGAGGCCCCG
AACATTGGCTATGAGTTGAACGTGGCCAAGTCCATATTGCAGAAGTATAG
CACCCTCAGTGGGGACAACTTGTTCGATCATCTTAGTGACATCATAAAGA
GGGTGATTGACGAACGTCCTCCGAATGTGATAGACTTCTTCGAGGAATTT
AGCCGAAATGTTCGCGAACAGAAGTTCCACTTGCCAGAACGCTTTCCGCC
CAGTGGCGTGTTCGATGAGGTGCGATCTTTCCGGGTGGCCAAGAAAATTC
TCCAATCCATGAAGCTGCCCTATGTCGTTGAGGGTGAGGATCTGATGGGC
GAAGACCTGTCCGTCGAGGATTTGAGAACGAACGAGGATATGCGCATTGT
CATCGACGATTCCATGCGATACTTCGTCACATTCAACGAGCGAGTCCAGC
AGCTGCAGTTCTATTGGACACAGTGCGGATTTAGCATCAGCAACGACGAC
ATCTTCCAGCTGGCCAGCGCCATGAACCGGCTGCAGACGCATCCCTCGAT
CATGCAATGCAGATTCTGGGGCTGC
BS07464.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3121-PA | 2127 | CG3121-RA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3121-RA | 2284 | CG3121-RA | 94..852 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:51:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24017514..24017820 | 17..323 | 1535 | 100 | Plus |
2R | 25286936 | 2R | 24018149..24018411 | 513..775 | 1315 | 100 | Plus |
2R | 25286936 | 2R | 24017901..24018093 | 322..514 | 965 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 01:52:02 has no hits.
BS07464.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:39 Download gff for
BS07464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-PA | 1..759 | 17..775 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:04:05 Download gff for
BS07464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-PA | 1..759 | 17..775 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:45:10 Download gff for
BS07464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-RA | 87..852 | 9..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:32:32 Download gff for
BS07464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3121-RA | 87..852 | 9..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:32:32 Download gff for
BS07464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24017507..24017818 | 9..321 | 99 | -> | Plus |
2R | 24017901..24018093 | 322..514 | 100 | -> | Plus |
2R | 24018151..24018411 | 515..775 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:45:10 Download gff for
BS07464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19905030..19905341 | 9..321 | 99 | -> | Plus |
arm_2R | 19905424..19905616 | 322..514 | 100 | -> | Plus |
arm_2R | 19905674..19905934 | 515..775 | 100 | | Plus |
BS07464.pep Sequence
Translation from 16 to 2142
> BS07464.pep
MDRDSCQNFSLDSTSSSHFAPPPVCAPRRKKPEKPAAEEASPECSNVTSS
SSSSTTTISIGAFDSQCNLHNARNPEAPNIGYELNVAKSILQKYSTLSGD
NLFDHLSDIIKRVIDERPPNVIDFFEEFSRNVREQKFHLPERFPPSGVFD
EVRSFRVAKKILQSMKLPYVVEGEDLMGEDLSVEDLRTNEDMRIVIDDSM
RYFVTFNERVQQLQFYWTQCGFSISNDDIFQLASAMNRLQTHPSIMQCRF
WGCINGLKASYYIVEASLTREEIASRLVMMEEEMRQKQIPFPMRKDREDK
PPPAHIGPELTPGIYGWEEFPPEELEKMKPKAAPVPLVEEMELYDIPPEF
IGKGCNRYSYFVVNSLFDDWIELPIVTPRQIVVSRQIKKFLTGDLEADVI
SYPCFPGKEKHYLRTLIGRITAGTYIAPVGYYRRMTKKEQRMFDGEEEEE
GEEEEEEEEEEEFNEGEEEQIEDNDVMLLKNEKYEAEPLGSLATPVAWVH
VRSNILNQQGRVVWYDEEKARKEREKALALYLKMQMLGEMEEEVEEEEDE
EEGEEEGEEEGMIEGFNQPELGPSILSSCANDMNPEVPVSWLARMTSKYT
NQKERMLVMQSNVWPGAYTFIFEKTCESIYLGWGHKYYARNIPFKHLPMV
QEEFPHNPEDFVEANDPTVEEEEAYKAWLLRKQQKAEYVAEDIEDYDDDE
FADQYDDD*
BS07464.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:27:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3121-PA | 708 | CG3121-PA | 1..708 | 1..708 | 3757 | 100 | Plus |