Clone Sequence Records
BS07469.3prime Sequence
903 bp (782 high quality bases) assembled on 2006-01-06
> BS07469.3prime
ATGGTCTAGAAAGCTTTCATTCGTTCGCCAGCTCATCAATGCGACACCGC
ACAGCGTGCTCCAGAACCTCCAGACTGGCGTAGTCTAACTCCTTCACCAA
ACACAGCGCGGCGGAGAGAATATTTGAATTCCTATTTATGGGCCTGCGAT
GGTAGCCCGAGTAGTGATTCATCACAGAGGCCGACAATGACGAGGTCCCA
TCACTATATCTTCCCTCGGGTCGCCTCGCCCTCGACCTGTCCTCCGGATC
CCATTCGCCGCCGTTCTCCCGGGCACTGCCGTTACGATAGGGCGTCATCT
CCGGACCTGCGCTGCGTCGCTGCGGCTGGTGCAACTGCTTCTGGCTGCCA
TAGGGATTGTGGTGCACCTGGGGCACCTGCTGGTGCTCCTCCCACTCGGT
TAGGTCCGTCTGGCTGTGGCGGTAGTGCGCCGGGTAGGCGGGTCTGTCCG
ACTGGTAGTATTCCTCTTTCGTGGGAGTGGTGCAGCCGCGCTGCTGCTGC
TGCTGCTGCTGTTGCTGCTGCTGATATTGCTGCTGCGGCGGCGGCGAGTG
TTGCGGGTAGCTGTGTTGCTGCTGCTGCAGTATCTGCTGCGGCGATGATC
GCCTCGACTGCTGCTGTTGCTGGTATGCATCCTCGTAGACCTCGTCCTCG
GGTGCGGCGACTCCGCCTCCACGCAGCGCATCCTCCACCTCCTGCTGTGT
GACCTCAACATTGTCGAGTTTCTTGAGGTTCGGCAGGGCGCGTAATACGA
TCGAACGATAGTTGGGACCCGCTCGTTCGCAGCAGGGATTTTCCTCCAGC
CAGAGATTCCTGAGACTCGGAAGATTTTGTAGGTAGGCGATCTCGTTGAT
GTCAGAGATGCTGTTCTTGCGCAAATATAGCTCCTGCAGTTTGGTGCAAT
CCT
BS07469.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PB | 1170 | CG14995-RB | 284..1170 | 903..17 | 4435 | 100 | Minus |
| CG14995-PD | 1065 | CG14995-RD | 179..1065 | 903..17 | 4435 | 100 | Minus |
| CG14995-PC | 1236 | CG14995-RC | 788..1236 | 465..17 | 2245 | 100 | Minus |
| CG14995-PA | 1365 | CG14995-RA | 917..1365 | 465..17 | 2245 | 100 | Minus |
| CG14995-PC | 1236 | CG14995-RC | 179..621 | 903..461 | 2215 | 100 | Minus |
| CG14995-PA | 1365 | CG14995-RA | 179..618 | 903..464 | 2200 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:57:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1870 | CG14995-RH | 318..1204 | 903..17 | 4435 | 100 | Minus |
| CG14995-RD | 2559 | CG14995-RD | 1007..1893 | 903..17 | 4435 | 100 | Minus |
| CG14995-RG | 3229 | CG14995-RG | 1814..2724 | 903..17 | 4185 | 97.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:57:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 463..761 | 1495 | 100 | Plus |
| 3L | 28110227 | 3L | 4095635..4095876 | 224..465 | 1210 | 100 | Plus |
| 3L | 28110227 | 3L | 4098026..4098167 | 762..903 | 710 | 100 | Plus |
| 3L | 28110227 | 3L | 4095009..4095123 | 17..131 | 575 | 100 | Plus |
| 3L | 28110227 | 3L | 4095200..4095295 | 131..226 | 480 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 18:57:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 639..491 | 303 | 70.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6977 | 624..452 | 281 | 63.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 624..490 | 272 | 69.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6954 | 624..437 | 243 | 63.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 624..490 | 242 | 66.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 624..490 | 230 | 67.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..3024 | 624..427 | 219 | 61.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 624..469 | 211 | 63.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 625..493 | 199 | 66.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7088 | 624..370 | 142 | 57.4 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 624..549 | 136 | 67.5 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1089..1157 | 624..557 | 108 | 63.8 | Minus |
BS07469.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:48 Download gff for
BS07469.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PB | 284..1170 | 17..903 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:04:17 Download gff for
BS07469.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PD | 179..1065 | 17..903 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:07:40 Download gff for
BS07469.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RD | 1007..1893 | 17..903 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:17:57 Download gff for
BS07469.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RD | 1007..1893 | 17..903 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:17:57 Download gff for
BS07469.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4095009..4095122 | 17..130 | 100 | <- | Plus |
| 3L | 4095200..4095293 | 131..224 | 100 | <- | Plus |
| 3L | 4095636..4095874 | 225..463 | 100 | <- | Plus |
| 3L | 4097507..4097804 | 464..761 | 100 | <- | Plus |
| 3L | 4098026..4098167 | 762..903 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:07:40 Download gff for
BS07469.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095009..4095122 | 17..130 | 100 | <- | Plus |
| arm_3L | 4095200..4095293 | 131..224 | 100 | <- | Plus |
| arm_3L | 4095636..4095874 | 225..463 | 100 | <- | Plus |
| arm_3L | 4097507..4097804 | 464..761 | 100 | <- | Plus |
| arm_3L | 4098026..4098167 | 762..903 | 100 | | Plus |
BS07469.5prime Sequence
898 bp (823 high quality bases) assembled on 2006-01-06
> BS07469.5prime
GAAGTTATCAGTCGACATGGGTCTGCGATCTGGTGTCTGGGGTTTGGGGG
ATCTGCCCACTTTGCTGCTCACTTCGGTCGCTCCGGCTGCTTTCACTCGA
CCCAATTCCAGGGGCAATCTTCTAACCAGTTTAGAAGTGTCCACTTTGGA
GCGAGTCACGATTTCCTGGACTGGAAAAACACGCGCCCCTCGAGAAAAAC
GGGGCAGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTG
GAAGTTCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGA
GGATTGCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTG
ACATCAACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTC
TGGCTGGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTC
GATCGTATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGG
TCACACAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCA
CCCGAGGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAG
GCGATCATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGC
AACACTCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCAGCAG
CAGCAGCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAATACTACCA
GTCGGACAGACCCGCCTACCCGGCGCACTACCGCCACAGCCAGACGGACC
TAACCGAGTGGGAGGAGCACCAGCAGGTGCCCCAGGTGCACCACAATCCC
TATGGCAGCCAGAAGCAGTTGCACCAGCCGCAGCGACGCAGCGCAGGT
BS07469.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PB | 1170 | CG14995-RB | 1..882 | 17..898 | 4410 | 100 | Plus |
| CG14995-PD | 1065 | CG14995-RD | 80..777 | 201..898 | 3490 | 100 | Plus |
| CG14995-PC | 1236 | CG14995-RC | 80..621 | 201..742 | 2710 | 100 | Plus |
| CG14995-PA | 1365 | CG14995-RA | 80..618 | 201..739 | 2695 | 100 | Plus |
| CG14995-PC | 1236 | CG14995-RC | 788..948 | 738..898 | 805 | 100 | Plus |
| CG14995-PA | 1365 | CG14995-RA | 917..1077 | 738..898 | 805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:21:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1870 | CG14995-RH | 35..916 | 17..898 | 4410 | 100 | Plus |
| CG14995-RG | 3229 | CG14995-RG | 1715..2412 | 201..898 | 3490 | 100 | Plus |
| CG14995-RD | 2559 | CG14995-RD | 908..1605 | 201..898 | 3490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 740..442 | 1495 | 100 | Minus |
| 3L | 28110227 | 3L | 4100995..4101180 | 202..17 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 4098026..4098201 | 441..266 | 880 | 100 | Minus |
| 3L | 28110227 | 3L | 4095716..4095876 | 898..738 | 805 | 100 | Minus |
| 3L | 28110227 | 3L | 4100780..4100846 | 267..201 | 335 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 20:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 564..712 | 303 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6977 | 579..751 | 281 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 579..713 | 272 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6954 | 579..766 | 243 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 579..713 | 242 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 579..713 | 230 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..3024 | 579..776 | 219 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 579..734 | 211 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 578..710 | 199 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7088 | 579..833 | 142 | 57.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 579..654 | 136 | 67.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1089..1157 | 579..646 | 108 | 63.8 | Plus |
BS07469.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:13:49 Download gff for
BS07469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PB | 1..882 | 17..898 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:04:19 Download gff for
BS07469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PB | 1..882 | 17..898 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:31:59 Download gff for
BS07469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 30..916 | 11..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:14:53 Download gff for
BS07469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 30..916 | 11..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:14:53 Download gff for
BS07469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4095716..4095874 | 740..898 | 100 | <- | Minus |
| 3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| 3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| 3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| 3L | 4100996..4101185 | 11..201 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:31:59 Download gff for
BS07469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095716..4095874 | 740..898 | 100 | <- | Minus |
| arm_3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| arm_3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| arm_3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| arm_3L | 4100996..4101185 | 11..201 | 98 | | Minus |
BS07469.complete Sequence
1202 bp (1202 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635877
> BS07469.complete
GAAGTTATCAGTCGACATGGGTCTGCGATCTGGTGTCTGGGGTTTGGGGG
ATCTGCCCACTTTGCTGCTCACTTCGGTCGCTCCGGCTGCTTTCACTCGA
CCCAATTCCAGGGGCAATCTTCTAACCAGTTTAGAAGTGTCCACTTTGGA
GCGAGTCACGATTTCCTGGACTGGAAAAACACGCGCCCCTCGAGAAAAAC
GGGGCAGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTG
GAAGTTCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGA
GGATTGCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTG
ACATCAACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTC
TGGCTGGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTC
GATCGTATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGG
TCACACAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCA
CCCGAGGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAG
GCGATCATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGC
AACACTCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCAGCAG
CAGCAGCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAATACTACCA
GTCGGACAGACCCGCCTACCCGGCGCACTACCGCCACAGCCAGACGGACC
TAACCGAGTGGGAGGAGCACCAGCAGGTGCCCCAGGTGCACCACAATCCC
TATGGCAGCCAGAAGCAGTTGCACCAGCCGCAGCGACGCAGCGCAGGTCC
GGAGATGACGCCCTATCGTAACGGCAGTGCCCGGGAGAACGGCGGCGAAT
GGGATCCGGAGGACAGGTCGAGGGCGAGGCGACCCGAGGGAAGATATAGT
GATGGGACCTCGTCATTGTCGGCCTCTGTGATGAATCACTACTCGGGCTA
CCATCGCAGGCCCATAAATAGGAATTCAAATATTCTCTCCGCCGCGCTGT
GTTTGGTGAAGGAGTTAGACTACGCCAGTCTGGAGGTTCTGGAGCACGCT
GTGCGGTGTCGCATTGATGAGCTGGCGAACGAATGAAAGCTTTCTAGACC
AT
BS07469.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1170 | CG14995-PH | 1..1170 | 17..1186 | 5850 | 100 | Plus |
| CG14995-RD | 1065 | CG14995-PD | 80..1065 | 201..1186 | 4930 | 100 | Plus |
| CG14995-RG | 1089 | CG14995-PG | 80..951 | 201..1072 | 4360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1870 | CG14995-RH | 35..1204 | 17..1186 | 5850 | 100 | Plus |
| CG14995-RD | 2559 | CG14995-RD | 908..1893 | 201..1186 | 4930 | 100 | Plus |
| CG14995-RG | 3229 | CG14995-RG | 1715..2586 | 201..1072 | 4360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:05:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 740..442 | 1495 | 100 | Minus |
| 3L | 28110227 | 3L | 4095635..4095876 | 979..738 | 1210 | 100 | Minus |
| 3L | 28110227 | 3L | 4100995..4101180 | 202..17 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 4098026..4098201 | 441..266 | 880 | 100 | Minus |
| 3L | 28110227 | 3L | 4095009..4095123 | 1186..1072 | 575 | 100 | Minus |
| 3L | 28110227 | 3L | 4095200..4095295 | 1072..977 | 480 | 100 | Minus |
| 3L | 28110227 | 3L | 4100780..4100846 | 267..201 | 335 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 17:05:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 564..712 | 303 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6977 | 579..751 | 281 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 579..713 | 272 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6954 | 579..766 | 243 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 579..713 | 242 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 579..713 | 230 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..3024 | 579..776 | 219 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 579..734 | 211 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 578..710 | 199 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7088 | 579..833 | 142 | 57.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 579..654 | 136 | 67.5 | Plus |
BS07469.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:50 Download gff for
BS07469.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RD | 72..1065 | 195..1186 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:46:57 Download gff for
BS07469.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RE | 30..1204 | 11..1186 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:59 Download gff for
BS07469.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 35..1203 | 17..1185 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:50 Download gff for
BS07469.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RE | 30..1204 | 11..1186 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:34:24 Download gff for
BS07469.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 35..1203 | 17..1185 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:34:24 Download gff for
BS07469.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4095010..4095122 | 1073..1185 | 100 | <- | Minus |
| 3L | 4095200..4095293 | 979..1072 | 100 | <- | Minus |
| 3L | 4095636..4095874 | 740..978 | 100 | <- | Minus |
| 3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| 3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| 3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| 3L | 4100996..4101180 | 17..201 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:59 Download gff for
BS07469.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095010..4095122 | 1073..1185 | 100 | <- | Minus |
| arm_3L | 4095200..4095293 | 979..1072 | 100 | <- | Minus |
| arm_3L | 4095636..4095874 | 740..978 | 100 | <- | Minus |
| arm_3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| arm_3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| arm_3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| arm_3L | 4100996..4101180 | 17..201 | 100 | | Minus |
BS07469.pep Sequence
Translation from 16 to 1185
> BS07469.pep
MGLRSGVWGLGDLPTLLLTSVAPAAFTRPNSRGNLLTSLEVSTLERVTIS
WTGKTRAPREKRGSDLSDVSIIKRMRGVEVLALSVNKISTLSTFEDCTKL
QELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERAGPNYRSIVLRA
LPNLKKLDNVEVTQQEVEDALRGGGVAAPEDEVYEDAYQQQQQSRRSSPQ
QILQQQQHSYPQHSPPPQQQYQQQQQQQQQQQRGCTTPTKEEYYQSDRPA
YPAHYRHSQTDLTEWEEHQQVPQVHHNPYGSQKQLHQPQRRSAGPEMTPY
RNGSARENGGEWDPEDRSRARRPEGRYSDGTSSLSASVMNHYSGYHRRPI
NRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELANE*
BS07469.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:29:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PH | 389 | CG14995-PH | 1..389 | 1..389 | 2045 | 100 | Plus |
| CG14995-PD | 354 | CG14995-PD | 28..354 | 63..389 | 1730 | 100 | Plus |
| CG14995-PG | 362 | CG14995-PG | 28..362 | 63..389 | 1711 | 97.6 | Plus |
| CG14995-PC | 411 | CG14995-PC | 28..411 | 63..389 | 1641 | 84.9 | Plus |
| CG14995-PI | 419 | CG14995-PI | 28..419 | 63..389 | 1622 | 83.2 | Plus |
