Clone Sequence Records
BS07491.3prime Sequence
847 bp (828 high quality bases) assembled on 2006-01-06
> BS07491.3prime
ATGGTCTAGAAAGCTTCTAAAAGTCTACTTGAAGCTTAGGATTCCCTTCT
AGGATCTTGGTTAATTGTCGTGTGATAAGAGGACAGAAATCAACCTTCAA
CCGGCGCAGTCCGCTAAGCGATTTGGTCAACTTCGCAACGACCTCATTGG
ACAGATTGGGCGAGCCACTCAGGTCCAGAAACTCCAAGGTAGACAGTTTT
TGCAATCCCATTAGGTGTAGCGTTGTAAAGTTCTGATTATGTAATATCAG
GGTCCGCAGTTCTTTAAGCTGGGAGAAAATACTCAGATCGAAGGAAGTAT
CCGACATAGGTCCAAAAGAATCCAGAATCTCTAGATGGCGCAGCGAATAC
GATTCCGCGATCGACGTAAGCAGCACGTTATTCACATGGTAGTCAAGCTG
GGCGGAAGAGTGAATAACCAAGGTGTGGAGACGAGACAGACCGCCCAGCT
GTATCACATTCATGAAGTCGGTAAGCTCGAGAACCTCGAGCATGGGGCAG
TAATGTGCGAGCCGTCCGTACAGCTCATTATCTTTCGCAAACTTGACAAT
GCCAGGGCAGCGCAGTTCGCGGAGATGCGACAGGGCCGCAAGTTGGATTA
GACACTTGGGCGACAGATCTACGCATCCTGAAACATTTAAAATCTCCAAG
GAAATTGGCAGAGATTTTAAACTGTCGCCTTTAATACTAAAGTTTTCTCT
GATGTCCAGACTCTTTAGTTTCGATAGCATCTGCAAGCAGTAAATGTGAG
CATCTTTCAGGTTACAACGCCTCAAGGATATGTTGGTAATATTAATCAAC
CCATTGGCACCATCGAACAGGTGAGTCATGTGGGCTAGGCTGACAGA
BS07491.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-PA | 1488 | CG14891-RA | 658..1488 | 847..17 | 4155 | 100 | Minus |
| CG14891-PB | 1011 | CG14891-RB | 181..1011 | 847..17 | 4155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 08:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1644 | CG14891-RA | 674..1504 | 847..17 | 4155 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:02:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16572188..16573018 | 847..17 | 4155 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-01 08:02:26 has no hits.
BS07491.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:14:25 Download gff for
BS07491.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PB | 182..1011 | 17..846 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:05:04 Download gff for
BS07491.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PB | 182..1011 | 17..846 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:19:54 Download gff for
BS07491.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 675..1507 | 11..846 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:48:14 Download gff for
BS07491.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 675..1507 | 11..846 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:48:14 Download gff for
BS07491.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16572189..16573021 | 11..846 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:19:54 Download gff for
BS07491.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12397911..12398743 | 11..846 | 99 | | Minus |
BS07491.5prime Sequence
913 bp (800 high quality bases) assembled on 2006-01-06
> BS07491.5prime
GAAGTTATCAGTCGACATGTTCCGCATGAGGCCAGATATTAAAAATTTTT
ACATTGAGCGTGGTGTGGCGTACACCGAAGATCGCGAGGTTGTGCGACAG
CTGACGATCTCCGGGAGTAGGCGGTTTTTGAAGTACCAGCTCCTGAAGTA
CTTCTCGATTTTCGGAAAAGTAGAGAAACTCCATTGGAAAAAGAAAAAAA
GATCGGGATCGGTTCTTTTTTATGAGGCTACCCATGCGGCAAAGGCTTTG
TATTGTACTAAGCACACTATCGATGGACATGATCTTTATTTACAGGCCAG
CACCTCCTGGCACCCAACGCCGGTGGAGGAATCAGGAACTCTTTCTGCCT
ACGATCTACCCATTACCGATGACATTTGGTGGAAAGTGCTCGATTATCTA
TCACTAAATGAACGTCTCAACTTTGCCGCCAGTTGTGAAAGATTCCAGGC
GATCTACGAATTGGATTCGCATCGGATCAATCATGTTCTTAATATGAAGG
ACGTTTGCACACTGACCCACCGGGTCATTAAAAGATTGATGCTGCTATCA
GGAAAACACATTCATTGTGTAACAGGTGGCCCGCTTCATCCGAATTGGCC
GTATTTGACCGAGTTTGTGCAGCTGTTGGGTGTAAGCTGTCCCAATCTAA
CAGAGCTAAGCTTCTTCAAAATTTCTGTCAGCCTAGCCCACATGACTCAC
CTGTTCGATGGTGCCAATGGGTTGATTAATATTACCAACATATCCTTGAG
GCGTTGTAACCTGAAAGATGCTCACATTTACTGCTTGCAGATGCTATCGA
AACTAAAGAGTCTGGACATCAGAGAAAACTTTAGTATTAAAGGCGACAGT
TTAAAATCTCTGCCCATTTTCCCTGGAGATTTTAAATGTTTCAGGATGCG
TAGATCTGTCGCC
BS07491.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-PA | 1488 | CG14891-RA | 1..848 | 17..864 | 4240 | 100 | Plus |
| CG14891-PB | 1011 | CG14891-RB | 1..371 | 494..864 | 1855 | 100 | Plus |
| CG14891-PA | 1488 | CG14891-RA | 851..896 | 868..913 | 205 | 97.8 | Plus |
| CG14891-PB | 1011 | CG14891-RB | 374..419 | 868..913 | 205 | 97.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1644 | CG14891-RA | 17..912 | 17..913 | 4430 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:18:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16571531..16572426 | 17..913 | 4405 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:18:49 has no hits.
BS07491.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:14:26 Download gff for
BS07491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PA | 1..896 | 17..913 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:05:06 Download gff for
BS07491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PA | 1..896 | 17..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:02:16 Download gff for
BS07491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 13..912 | 10..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:56:36 Download gff for
BS07491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 13..912 | 10..913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:56:36 Download gff for
BS07491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16571527..16572426 | 10..913 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:02:16 Download gff for
BS07491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12397249..12398148 | 10..913 | 99 | | Plus |
BS07491.complete Sequence
1520 bp (1520 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635886
> BS07491.complete
GAAGTTATCAGTCGACATGTTCCGCATGAGGCCAGATATTAAAAATTTTT
ACATTGAGCGTGGTGTGGCGTACACCGAAGATCGCGAGGTTGTGCGACAG
CTGACGATCTCCGGGAGTAGGCGGTTTTTGAAGTACCAGCTCCTGAAGTA
CTTCTCGATTTTCGGAAAAGTAGAGAAACTCCATTGGAAAAAGAAAAAAA
GATCGGGATCGGTTCTTTTTTATGAGGCTACCCATGCGGCAAAGGCTTTG
TATTGTACTAAGCACACTATCGATGGACATGATCTTTATTTACAGGCCAG
CACCTCCTGGCACCCAACGCCGGTGGAGGAATCAGGAACTCTTTCTGCCT
ACGATCTACCCATTACCGATGACATTTGGTGGAAAGTGCTCGATTATCTA
TCACTAAATGAACGTCTCAACTTTGCCGCCAGTTGTGAAAGATTCCAGGC
GATCTACGAATTGGATTCGCATCGGATCAATCATGTTCTTAATATGAAGG
ACGTTTGCACACTGACCCACCGGGTCATTAAAAGATTGATGCTGCTATCA
GGAAAACACATTCATTGTGTAACAGGTGGCCCGCTTCATCCGAATTGGCC
GTATTTGACCGAGTTTGTGCAGCTGTTGGGTGTAAGCTGTCCCAATCTAA
CAGAGCTAAGCTTCTTCAAAATTTCTGTCAGCCTAGCCCACATGACTCAC
CTGTTCGATGGTGCCAATGGGTTGATTAATATTACCAACATATCCTTGAG
GCGTTGTAACCTGAAAGATGCTCACATTTACTGCTTGCAGATGCTATCGA
AACTAAAGAGTCTGGACATCAGAGAAAACTTTAGTATTAAAGGCGACAGT
TTAAAATCTCTGCCAATTTCCTTGGAGATTTTAAATGTTTCAGGATGCGT
AGATCTGTCGCCCAAGTGTCTAATCCAACTTGCGGCCCTGTCGCATCTCC
GCGAACTGCGCTGCCCTGGCATTGTCAAGTTTGCGAAAGATAATGAGCTG
TACGGACGGCTCGCACATTACTGCCCCATGCTCGAGGTTCTCGAGCTTAC
CGACTTCATGAATGTGATACAGCTGGGCGGTCTGTCTCGTCTCCACACCT
TGGTTATTCACTCTTCCGCCCAGCTTGACTACCATGTGAATAACGTGCTG
CTTACGTCGATCGCGGAATCGTATTCGCTGCGCCATCTAGAGATTCTGGA
TTCTTTTGGACCTATGTCGGATACTTCCTTCGATCTGAGTATTTTCTCCC
AGCTTAAAGAACTGCGGACCCTGATATTACATAATCAGAACTTTACAACG
CTACACCTAATGGGATTGCAAAAACTGTCTACCTTGGAGTTTCTGGACCT
GAGTGGCTCGCCCAATCTGTCCAATGAGGTCGTTGCGAAGTTGACCAAAT
CGCTTAGCGGACTGCGCCGGTTGAAGGTTGATTTCTGTCCTCTTATCACA
CGACAATTAACCAAGATCCTAGAAGGGAATCCTAAGCTTCAAGTAGACTT
TTAGAAGCTTTCTAGACCAT
BS07491.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:54:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1488 | CG14891-PA | 1..1488 | 17..1504 | 7440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:54:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1644 | CG14891-RA | 17..1504 | 17..1504 | 7440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:54:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16571531..16573018 | 17..1504 | 7440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:54:15 has no hits.
BS07491.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:33 Download gff for
BS07491.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 1..1488 | 17..1504 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:46:34 Download gff for
BS07491.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 12..1506 | 10..1510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:33:55 Download gff for
BS07491.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 22..1504 | 22..1504 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:33 Download gff for
BS07491.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 12..1506 | 10..1510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:11 Download gff for
BS07491.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 22..1504 | 22..1504 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:11 Download gff for
BS07491.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16571536..16573018 | 22..1504 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:33:55 Download gff for
BS07491.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12397258..12398740 | 22..1504 | 100 | | Plus |
BS07491.pep Sequence
Translation from 16 to 1503
> BS07491.pep
MFRMRPDIKNFYIERGVAYTEDREVVRQLTISGSRRFLKYQLLKYFSIFG
KVEKLHWKKKKRSGSVLFYEATHAAKALYCTKHTIDGHDLYLQASTSWHP
TPVEESGTLSAYDLPITDDIWWKVLDYLSLNERLNFAASCERFQAIYELD
SHRINHVLNMKDVCTLTHRVIKRLMLLSGKHIHCVTGGPLHPNWPYLTEF
VQLLGVSCPNLTELSFFKISVSLAHMTHLFDGANGLINITNISLRRCNLK
DAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLPISLEILNVSGCVDLSPK
CLIQLAALSHLRELRCPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNV
IQLGGLSRLHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPM
SDTSFDLSIFSQLKELRTLILHNQNFTTLHLMGLQKLSTLEFLDLSGSPN
LSNEVVAKLTKSLSGLRRLKVDFCPLITRQLTKILEGNPKLQVDF*
BS07491.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-PA | 495 | CG14891-PA | 1..495 | 1..495 | 2572 | 100 | Plus |
| CG15056-PA | 399 | CG15056-PA | 13..378 | 118..481 | 435 | 33.2 | Plus |
