Clone Sequence Records
BS07493.3prime Sequence
933 bp (857 high quality bases) assembled on 2006-01-06
> BS07493.3prime
ATGGTCTAGAAAGCTTCTATTTGCTCTTGGCCAGCTGACTCTGAGCCGAG
GTGGTCAGCTTGGAGACGACCCGCGTTAGGGCCCGATTCTCGGCTCGCAG
ACGATCGTTCTCAGTCTTTAGCTTCTGCAATAGCTTGAGCTCTTCTTCCA
ACTCGGAAAGCTTGCGTTCCATAGCTCTTCTTTCGCGTTTCTCAAGTTCA
GATAGTGAATTTTTCGTTGTGGCATTGGCGAATCTCTCGAGTGTTGCACG
TGTCTGGACGGCTTCATCGTCCTTCTGCTTGAGCATCTGCCTCAGCTTAT
CGTTCTCCAATTTTTCCGCTTCCCAGAGCGCCTTGTAGTCAATGCCATCG
CCATTCTCCGTCTTGTCATTGCTGCTGGAGCTCTTTGACTCGCTGGTGGT
GGCCGTACTCGCGGTGCTGCCCAGCCGGGAACGGGATGTCCGCTCACTGC
CACTTTCATATCCTTCACTCTTCTCTGAGGAAGCACTAATGGATCTCTGT
GCCGCACTCTTCGACCGCGTGCGATTGCGAGACTTGCGCTCCTGTTCCCG
CAAAGAGTTGCTCCTTGTGGCTGCGATGGCGGCCACAGTGGCTCCGGCAC
TGGTTACCCCATTCGAGGATGGACCACCATAGGCACCATTCAGGCTGCTA
TTTGATGCTGACAGTGATTTGGTCTTCAGTAAACGAGAACTCTTGAACGA
ATTGGACGAACTCAAACCGGGCGACTTGAAGGTCAGCGAAGCGGTGGTCA
CACCCTTATCATAACTACTCGAATAGGGGCTGACATATCGATCGCTTGTG
GAGTACGAAGATCCCGCCGAGGAATAGGAACTGGGATTGTACCTGGAACT
GTCGTATCCACCACCACCGCTGCCATANGAACTCCGACCAGCACCTCCTC
CGCCGTACAAGCTCTCCCTCGAGCTGTACACAC
BS07493.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32156-PE | 1134 | Mbs-RE | 218..1134 | 933..17 | 4566 | 99.8 | Minus |
CG32156-PC | 3438 | Mbs-RC | 3031..3352 | 454..133 | 1610 | 100 | Minus |
CG32156-PA | 3309 | Mbs-RA | 2902..3223 | 454..133 | 1610 | 100 | Minus |
CG32156-PB | 3309 | Mbs-RB | 2902..3223 | 454..133 | 1610 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:39:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mbs-RE | 1906 | CG32156-RE | 337..1253 | 933..17 | 4574 | 99.9 | Minus |
Mbs-RF | 2404 | CG32156-RF | 337..1137 | 933..133 | 3994 | 99.9 | Minus |
Mbs-RQ | 4482 | CG32156-RQ | 3392..3829 | 454..17 | 2190 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:39:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16076229..16076648 | 874..455 | 2100 | 100 | Minus |
3L | 28110227 | 3L | 16076982..16077124 | 454..312 | 715 | 100 | Minus |
3L | 28110227 | 3L | 16078818..16078936 | 135..17 | 595 | 100 | Minus |
3L | 28110227 | 3L | 16077192..16077282 | 311..221 | 455 | 100 | Minus |
3L | 28110227 | 3L | 16077723..16077809 | 220..134 | 435 | 100 | Minus |
3L | 28110227 | 3L | 16075705..16075765 | 933..873 | 294 | 98.4 | Minus |
Blast to na_te.dros performed on 2015-02-12 12:39:30 has no hits.
BS07493.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:14:29 Download gff for
BS07493.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-PE | 218..1134 | 17..933 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:05:10 Download gff for
BS07493.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32156-PE | 218..1134 | 17..933 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:53:12 Download gff for
BS07493.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 337..1255 | 13..933 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:16:48 Download gff for
BS07493.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 337..1255 | 13..933 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:16:48 Download gff for
BS07493.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16077192..16077282 | 221..311 | 100 | -> | Minus |
3L | 16076982..16077124 | 312..454 | 100 | -> | Minus |
3L | 16077723..16077809 | 134..220 | 100 | -> | Minus |
3L | 16078820..16078938 | 13..133 | 98 | | Minus |
3L | 16075705..16075764 | 874..933 | 98 | -> | Minus |
3L | 16076230..16076648 | 455..873 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:53:12 Download gff for
BS07493.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16068805..16068864 | 874..933 | 98 | -> | Minus |
arm_3L | 16069330..16069748 | 455..873 | 100 | -> | Minus |
arm_3L | 16070082..16070224 | 312..454 | 100 | -> | Minus |
arm_3L | 16070292..16070382 | 221..311 | 100 | -> | Minus |
arm_3L | 16070823..16070909 | 134..220 | 100 | -> | Minus |
arm_3L | 16071920..16072038 | 13..133 | 98 | | Minus |
BS07493.5prime Sequence
829 bp (828 high quality bases) assembled on 2006-01-06
> BS07493.5prime
GAAGTTATCAGTCGACATGTCCTTTCGCTCGAGATCAAGAACCCAGGCGC
CCCTGTCCAGTCGGCGGCGATCGTTGTCCTCCAGTTCGCGAATGGCTCCA
TCAAGTGGTGGTTCCGGGGCCTATAACTACAACGGAAGTAGCTATAGCAG
CTCCGGCAGCACTGGTCGTCCCCTGAGCACGGGCTACTTTCCCAGCAGCA
GTAGCGCCTCCAGTTACCAGAGTCCCTATGCCAGTGTGTACAGCTCGAGG
GAGAGCTTGTACGGCGGAGGAGGTGCTGGTCGGAGTTCTTATGGCAGCGG
TGGTGGTGGATACGACAGTTCCAGGTACAATCCCAGTTCCTATTCCTCGG
CGGGATCTTCGTACTCCACAAGCGATCGATATGTCAGCCCCTATTCGAGT
AGTTATGATAAGGGTGTGACCACCGCTTCGCTGACCTTCAAGTCGCCCGG
TTTGAGTTCGTCCAATTCGTTCAAGAGTTCTCGTTTACTGAAGACCAAAT
CACTGTCAGCATCAAATAGCAGCCTGAATGGTGCCTATGGTGGTCCATCC
TCGAATGGGGTAACCAGTGCCGGAGCCACTGTGGCCGCCATCGCAGCCAC
AAGGAGCAACTCTTTGCGGGAACAGGAGCGCAAGTCTCGCAATCGCACGC
GGTCGAAGAGTGCGGCACAGAGATCCATTAGTGCTTCCTCAGAGAAGAGT
GAAGGATATGAAAGTGGCAGTGAGCGGACATCCCGTTCCCGGCTGGGCAG
CACCGCGAGTACGGCCACCACCAGCGAGTCAAAGAGCTCCAGCAGCAATG
ACAAGACGGAGAATGGCGATGGCATTGAC
BS07493.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32156-PE | 1134 | Mbs-RE | 1..813 | 17..829 | 4065 | 100 | Plus |
CG32156-PC | 3438 | Mbs-RC | 3031..3147 | 713..829 | 585 | 100 | Plus |
CG32156-PA | 3309 | Mbs-RA | 2902..3018 | 713..829 | 585 | 100 | Plus |
CG32156-PB | 3309 | Mbs-RB | 2902..3018 | 713..829 | 585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mbs-RF | 2404 | CG32156-RF | 111..932 | 7..829 | 4075 | 99.8 | Plus |
Mbs-RE | 1906 | CG32156-RE | 111..932 | 7..829 | 4075 | 99.8 | Plus |
Mbs-RQ | 4482 | CG32156-RQ | 3392..3508 | 713..829 | 585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:05:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16076229..16076648 | 293..712 | 2100 | 100 | Plus |
3L | 28110227 | 3L | 16075484..16075765 | 13..294 | 1395 | 99.6 | Plus |
3L | 28110227 | 3L | 16076982..16077098 | 713..829 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 07:05:58 has no hits.
BS07493.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:14:30 Download gff for
BS07493.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-PE | 1..813 | 17..829 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:05:11 Download gff for
BS07493.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32156-PE | 1..813 | 17..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:22:17 Download gff for
BS07493.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 111..932 | 7..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:15:05 Download gff for
BS07493.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 111..932 | 7..829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:15:05 Download gff for
BS07493.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16075479..16075764 | 7..293 | 99 | -> | Plus |
3L | 16076230..16076648 | 294..712 | 100 | -> | Plus |
3L | 16076982..16077098 | 713..829 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:22:17 Download gff for
BS07493.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16068579..16068864 | 7..293 | 99 | -> | Plus |
arm_3L | 16069330..16069748 | 294..712 | 100 | -> | Plus |
arm_3L | 16070082..16070198 | 713..829 | 100 | | Plus |
BS07493.complete Sequence
1166 bp (1166 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635888
> BS07493.complete
GAAGTTATCAGTCGACATGTCCTTTCGCTCGAGATCAAGAACCCAGGCGC
CCCTGTCCAGTCGGCGGCGATCGTTGTCCTCCAGTTCGCGAATGGCTCCA
TCAAGTGGTGGTTCCGGGGCCTATAACTACAACGGAAGTAGCTATAGCAG
CTCCGGCAGCACTGGTCGTCCCCTGAGCACGGGCTACTTTCCCAGCAGCA
GTAGCGCCTCCAGTTACCAGAGTCCCTATGCCAGTGTGTACAGCTCGAGG
GAGAGCTTGTACGGCGGAGGAGGTGCTGGTCGGAGTTCTTATGGCAGCGG
TGGTGGTGGATACGACAGTTCCAGGTACAATCCCAGTTCCTATTCCTCGG
CGGGATCTTCGTACTCCACAAGCGATCGATATGTCAGCCCCTATTCGAGT
AGTTATGATAAGGGTGTGACCACCGCTTCGCTGACCTTCAAGTCGCCCGG
TTTGAGTTCGTCCAATTCGTTCAAGAGTTCTCGTTTACTGAAGACCAAAT
CACTGTCAGCATCAAATAGCAGCCTGAATGGTGCCTATGGTGGTCCATCC
TCGAATGGGGTAACCAGTGCCGGAGCCACTGTGGCCGCCATCGCAGCCAC
AAGGAGCAACTCTTTGCGGGAACAGGAGCGCAAGTCTCGCAATCGCACGC
GGTCGAAGAGTGCGGCACAGAGATCCATTAGTGCTTCCTCAGAGAAGAGT
GAAGGATATGAAAGTGGCAGTGAGCGGACATCCCGTTCCCGGCTGGGCAG
CACCGCGAGTACGGCCACCACCAGCGAGTCAAAGAGCTCCAGCAGCAATG
ACAAGACGGAGAATGGCGATGGCATTGACTACAAGGCGCTCTGGGAAGCG
GAAAAATTGGAGAACGATAAGCTGAGGCAGATGCTCAAGCAGAAGGACGA
TGAAGCCGTCCAGACACGTGCAACACTCGAGAGATTCGCCAATGCCACAA
CGAAAAATTCACTATCTGAACTTGAGAAACGCGAAAGAAGAGCTATGGAA
CGCAAGCTTTCCGAGTTGGAAGAAGAGCTCAAGCTATTGCAGAAGCTAAA
GACTGAGAACGATCGTCTGCGAGCCGAGAATCGGGCCCTAACGCGGGTCG
TCTCCAAGCTGACCACCTCGGCTCAGAGTCAGCTGGCCAAGAGCAAATAG
AAGCTTTCTAGACCAT
BS07493.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:51:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mbs-RE | 1134 | CG32156-PE | 1..1134 | 17..1150 | 5670 | 100 | Plus |
Mbs-RF | 1104 | CG32156-PF | 1..1018 | 17..1034 | 5090 | 100 | Plus |
Mbs-RQ | 3336 | CG32156-PQ | 2899..3336 | 713..1150 | 2190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:51:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mbs-RE | 1906 | CG32156-RE | 116..1253 | 13..1150 | 5675 | 99.9 | Plus |
Mbs-RF | 2404 | CG32156-RF | 116..1137 | 13..1034 | 5095 | 99.9 | Plus |
Mbs-RQ | 4482 | CG32156-RQ | 3392..3829 | 713..1150 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:51:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16076229..16076648 | 293..712 | 2100 | 100 | Plus |
3L | 28110227 | 3L | 16075484..16075765 | 13..294 | 1395 | 99.6 | Plus |
3L | 28110227 | 3L | 16076982..16077124 | 713..855 | 715 | 100 | Plus |
3L | 28110227 | 3L | 16078818..16078936 | 1032..1150 | 595 | 100 | Plus |
3L | 28110227 | 3L | 16077192..16077282 | 856..946 | 455 | 100 | Plus |
3L | 28110227 | 3L | 16077723..16077809 | 947..1033 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:51:10 has no hits.
BS07493.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:34 Download gff for
BS07493.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 1..1134 | 17..1150 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:46:36 Download gff for
BS07493.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 110..1254 | 7..1154 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:58 Download gff for
BS07493.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 120..1247 | 17..1144 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:34 Download gff for
BS07493.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 110..1254 | 7..1154 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:32 Download gff for
BS07493.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mbs-RE | 120..1247 | 17..1144 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:32 Download gff for
BS07493.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16075488..16075764 | 17..293 | 100 | -> | Plus |
3L | 16076230..16076648 | 294..712 | 100 | -> | Plus |
3L | 16076982..16077124 | 713..855 | 100 | -> | Plus |
3L | 16077192..16077282 | 856..946 | 100 | -> | Plus |
3L | 16077723..16077809 | 947..1033 | 100 | -> | Plus |
3L | 16078820..16078930 | 1034..1144 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:58 Download gff for
BS07493.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16070082..16070224 | 713..855 | 100 | -> | Plus |
arm_3L | 16070292..16070382 | 856..946 | 100 | -> | Plus |
arm_3L | 16070823..16070909 | 947..1033 | 100 | -> | Plus |
arm_3L | 16068588..16068864 | 17..293 | 100 | -> | Plus |
arm_3L | 16069330..16069748 | 294..712 | 100 | -> | Plus |
arm_3L | 16071920..16072030 | 1034..1144 | 100 | | Plus |
BS07493.pep Sequence
Translation from 16 to 1149
> BS07493.pep
MSFRSRSRTQAPLSSRRRSLSSSSRMAPSSGGSGAYNYNGSSYSSSGSTG
RPLSTGYFPSSSSASSYQSPYASVYSSRESLYGGGGAGRSSYGSGGGGYD
SSRYNPSSYSSAGSSYSTSDRYVSPYSSSYDKGVTTASLTFKSPGLSSSN
SFKSSRLLKTKSLSASNSSLNGAYGGPSSNGVTSAGATVAAIAATRSNSL
REQERKSRNRTRSKSAAQRSISASSEKSEGYESGSERTSRSRLGSTASTA
TTSESKSSSSNDKTENGDGIDYKALWEAEKLENDKLRQMLKQKDDEAVQT
RATLERFANATTKNSLSELEKRERRAMERKLSELEEELKLLQKLKTENDR
LRAENRALTRVVSKLTTSAQSQLAKSK*
BS07493.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mbs-PE | 377 | CG32156-PE | 1..377 | 1..377 | 1843 | 100 | Plus |
Mbs-PF | 367 | CG32156-PF | 1..366 | 1..366 | 1733 | 96.4 | Plus |
Mbs-PQ | 1111 | CG32156-PQ | 686..1111 | 19..377 | 745 | 47.7 | Plus |
Mbs-PJ | 1101 | CG32156-PJ | 686..1100 | 19..366 | 635 | 43.3 | Plus |
Mbs-PI | 1144 | CG32156-PI | 729..1143 | 19..366 | 635 | 43.3 | Plus |