Clone BS07493 Report

Search the DGRC for BS07493

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:74
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptMbs-RE
Protein status:BS07493.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07493.3prime Sequence

933 bp (857 high quality bases) assembled on 2006-01-06

> BS07493.3prime
ATGGTCTAGAAAGCTTCTATTTGCTCTTGGCCAGCTGACTCTGAGCCGAG
GTGGTCAGCTTGGAGACGACCCGCGTTAGGGCCCGATTCTCGGCTCGCAG
ACGATCGTTCTCAGTCTTTAGCTTCTGCAATAGCTTGAGCTCTTCTTCCA
ACTCGGAAAGCTTGCGTTCCATAGCTCTTCTTTCGCGTTTCTCAAGTTCA
GATAGTGAATTTTTCGTTGTGGCATTGGCGAATCTCTCGAGTGTTGCACG
TGTCTGGACGGCTTCATCGTCCTTCTGCTTGAGCATCTGCCTCAGCTTAT
CGTTCTCCAATTTTTCCGCTTCCCAGAGCGCCTTGTAGTCAATGCCATCG
CCATTCTCCGTCTTGTCATTGCTGCTGGAGCTCTTTGACTCGCTGGTGGT
GGCCGTACTCGCGGTGCTGCCCAGCCGGGAACGGGATGTCCGCTCACTGC
CACTTTCATATCCTTCACTCTTCTCTGAGGAAGCACTAATGGATCTCTGT
GCCGCACTCTTCGACCGCGTGCGATTGCGAGACTTGCGCTCCTGTTCCCG
CAAAGAGTTGCTCCTTGTGGCTGCGATGGCGGCCACAGTGGCTCCGGCAC
TGGTTACCCCATTCGAGGATGGACCACCATAGGCACCATTCAGGCTGCTA
TTTGATGCTGACAGTGATTTGGTCTTCAGTAAACGAGAACTCTTGAACGA
ATTGGACGAACTCAAACCGGGCGACTTGAAGGTCAGCGAAGCGGTGGTCA
CACCCTTATCATAACTACTCGAATAGGGGCTGACATATCGATCGCTTGTG
GAGTACGAAGATCCCGCCGAGGAATAGGAACTGGGATTGTACCTGGAACT
GTCGTATCCACCACCACCGCTGCCATANGAACTCCGACCAGCACCTCCTC
CGCCGTACAAGCTCTCCCTCGAGCTGTACACAC

BS07493.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32156-PE 1134 Mbs-RE 218..1134 933..17 4566 99.8 Minus
CG32156-PC 3438 Mbs-RC 3031..3352 454..133 1610 100 Minus
CG32156-PA 3309 Mbs-RA 2902..3223 454..133 1610 100 Minus
CG32156-PB 3309 Mbs-RB 2902..3223 454..133 1610 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-RE 1906 CG32156-RE 337..1253 933..17 4574 99.9 Minus
Mbs-RF 2404 CG32156-RF 337..1137 933..133 3994 99.9 Minus
Mbs-RQ 4482 CG32156-RQ 3392..3829 454..17 2190 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16076229..16076648 874..455 2100 100 Minus
3L 28110227 3L 16076982..16077124 454..312 715 100 Minus
3L 28110227 3L 16078818..16078936 135..17 595 100 Minus
3L 28110227 3L 16077192..16077282 311..221 455 100 Minus
3L 28110227 3L 16077723..16077809 220..134 435 100 Minus
3L 28110227 3L 16075705..16075765 933..873 294 98.4 Minus
Blast to na_te.dros performed on 2015-02-12 12:39:30 has no hits.

BS07493.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:14:29 Download gff for BS07493.3prime
Subject Subject Range Query Range Percent Splice Strand
Mbs-PE 218..1134 17..933 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:05:10 Download gff for BS07493.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32156-PE 218..1134 17..933 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:53:12 Download gff for BS07493.3prime
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 337..1255 13..933 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:16:48 Download gff for BS07493.3prime
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 337..1255 13..933 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:16:48 Download gff for BS07493.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 16077192..16077282 221..311 100 -> Minus
3L 16076982..16077124 312..454 100 -> Minus
3L 16077723..16077809 134..220 100 -> Minus
3L 16078820..16078938 13..133 98   Minus
3L 16075705..16075764 874..933 98 -> Minus
3L 16076230..16076648 455..873 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:53:12 Download gff for BS07493.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16068805..16068864 874..933 98 -> Minus
arm_3L 16069330..16069748 455..873 100 -> Minus
arm_3L 16070082..16070224 312..454 100 -> Minus
arm_3L 16070292..16070382 221..311 100 -> Minus
arm_3L 16070823..16070909 134..220 100 -> Minus
arm_3L 16071920..16072038 13..133 98   Minus

BS07493.5prime Sequence

829 bp (828 high quality bases) assembled on 2006-01-06

> BS07493.5prime
GAAGTTATCAGTCGACATGTCCTTTCGCTCGAGATCAAGAACCCAGGCGC
CCCTGTCCAGTCGGCGGCGATCGTTGTCCTCCAGTTCGCGAATGGCTCCA
TCAAGTGGTGGTTCCGGGGCCTATAACTACAACGGAAGTAGCTATAGCAG
CTCCGGCAGCACTGGTCGTCCCCTGAGCACGGGCTACTTTCCCAGCAGCA
GTAGCGCCTCCAGTTACCAGAGTCCCTATGCCAGTGTGTACAGCTCGAGG
GAGAGCTTGTACGGCGGAGGAGGTGCTGGTCGGAGTTCTTATGGCAGCGG
TGGTGGTGGATACGACAGTTCCAGGTACAATCCCAGTTCCTATTCCTCGG
CGGGATCTTCGTACTCCACAAGCGATCGATATGTCAGCCCCTATTCGAGT
AGTTATGATAAGGGTGTGACCACCGCTTCGCTGACCTTCAAGTCGCCCGG
TTTGAGTTCGTCCAATTCGTTCAAGAGTTCTCGTTTACTGAAGACCAAAT
CACTGTCAGCATCAAATAGCAGCCTGAATGGTGCCTATGGTGGTCCATCC
TCGAATGGGGTAACCAGTGCCGGAGCCACTGTGGCCGCCATCGCAGCCAC
AAGGAGCAACTCTTTGCGGGAACAGGAGCGCAAGTCTCGCAATCGCACGC
GGTCGAAGAGTGCGGCACAGAGATCCATTAGTGCTTCCTCAGAGAAGAGT
GAAGGATATGAAAGTGGCAGTGAGCGGACATCCCGTTCCCGGCTGGGCAG
CACCGCGAGTACGGCCACCACCAGCGAGTCAAAGAGCTCCAGCAGCAATG
ACAAGACGGAGAATGGCGATGGCATTGAC

BS07493.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:48:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG32156-PE 1134 Mbs-RE 1..813 17..829 4065 100 Plus
CG32156-PC 3438 Mbs-RC 3031..3147 713..829 585 100 Plus
CG32156-PA 3309 Mbs-RA 2902..3018 713..829 585 100 Plus
CG32156-PB 3309 Mbs-RB 2902..3018 713..829 585 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:00
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-RF 2404 CG32156-RF 111..932 7..829 4075 99.8 Plus
Mbs-RE 1906 CG32156-RE 111..932 7..829 4075 99.8 Plus
Mbs-RQ 4482 CG32156-RQ 3392..3508 713..829 585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:05:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16076229..16076648 293..712 2100 100 Plus
3L 28110227 3L 16075484..16075765 13..294 1395 99.6 Plus
3L 28110227 3L 16076982..16077098 713..829 585 100 Plus
Blast to na_te.dros performed on 2015-02-12 07:05:58 has no hits.

BS07493.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:14:30 Download gff for BS07493.5prime
Subject Subject Range Query Range Percent Splice Strand
Mbs-PE 1..813 17..829 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:05:11 Download gff for BS07493.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32156-PE 1..813 17..829 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:22:17 Download gff for BS07493.5prime
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 111..932 7..829 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:15:05 Download gff for BS07493.5prime
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 111..932 7..829 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:15:05 Download gff for BS07493.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16075479..16075764 7..293 99 -> Plus
3L 16076230..16076648 294..712 100 -> Plus
3L 16076982..16077098 713..829 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:22:17 Download gff for BS07493.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16068579..16068864 7..293 99 -> Plus
arm_3L 16069330..16069748 294..712 100 -> Plus
arm_3L 16070082..16070198 713..829 100   Plus

BS07493.complete Sequence

1166 bp (1166 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635888

> BS07493.complete
GAAGTTATCAGTCGACATGTCCTTTCGCTCGAGATCAAGAACCCAGGCGC
CCCTGTCCAGTCGGCGGCGATCGTTGTCCTCCAGTTCGCGAATGGCTCCA
TCAAGTGGTGGTTCCGGGGCCTATAACTACAACGGAAGTAGCTATAGCAG
CTCCGGCAGCACTGGTCGTCCCCTGAGCACGGGCTACTTTCCCAGCAGCA
GTAGCGCCTCCAGTTACCAGAGTCCCTATGCCAGTGTGTACAGCTCGAGG
GAGAGCTTGTACGGCGGAGGAGGTGCTGGTCGGAGTTCTTATGGCAGCGG
TGGTGGTGGATACGACAGTTCCAGGTACAATCCCAGTTCCTATTCCTCGG
CGGGATCTTCGTACTCCACAAGCGATCGATATGTCAGCCCCTATTCGAGT
AGTTATGATAAGGGTGTGACCACCGCTTCGCTGACCTTCAAGTCGCCCGG
TTTGAGTTCGTCCAATTCGTTCAAGAGTTCTCGTTTACTGAAGACCAAAT
CACTGTCAGCATCAAATAGCAGCCTGAATGGTGCCTATGGTGGTCCATCC
TCGAATGGGGTAACCAGTGCCGGAGCCACTGTGGCCGCCATCGCAGCCAC
AAGGAGCAACTCTTTGCGGGAACAGGAGCGCAAGTCTCGCAATCGCACGC
GGTCGAAGAGTGCGGCACAGAGATCCATTAGTGCTTCCTCAGAGAAGAGT
GAAGGATATGAAAGTGGCAGTGAGCGGACATCCCGTTCCCGGCTGGGCAG
CACCGCGAGTACGGCCACCACCAGCGAGTCAAAGAGCTCCAGCAGCAATG
ACAAGACGGAGAATGGCGATGGCATTGACTACAAGGCGCTCTGGGAAGCG
GAAAAATTGGAGAACGATAAGCTGAGGCAGATGCTCAAGCAGAAGGACGA
TGAAGCCGTCCAGACACGTGCAACACTCGAGAGATTCGCCAATGCCACAA
CGAAAAATTCACTATCTGAACTTGAGAAACGCGAAAGAAGAGCTATGGAA
CGCAAGCTTTCCGAGTTGGAAGAAGAGCTCAAGCTATTGCAGAAGCTAAA
GACTGAGAACGATCGTCTGCGAGCCGAGAATCGGGCCCTAACGCGGGTCG
TCTCCAAGCTGACCACCTCGGCTCAGAGTCAGCTGGCCAAGAGCAAATAG
AAGCTTTCTAGACCAT

BS07493.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:51:11
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-RE 1134 CG32156-PE 1..1134 17..1150 5670 100 Plus
Mbs-RF 1104 CG32156-PF 1..1018 17..1034 5090 100 Plus
Mbs-RQ 3336 CG32156-PQ 2899..3336 713..1150 2190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-RE 1906 CG32156-RE 116..1253 13..1150 5675 99.9 Plus
Mbs-RF 2404 CG32156-RF 116..1137 13..1034 5095 99.9 Plus
Mbs-RQ 4482 CG32156-RQ 3392..3829 713..1150 2190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16076229..16076648 293..712 2100 100 Plus
3L 28110227 3L 16075484..16075765 13..294 1395 99.6 Plus
3L 28110227 3L 16076982..16077124 713..855 715 100 Plus
3L 28110227 3L 16078818..16078936 1032..1150 595 100 Plus
3L 28110227 3L 16077192..16077282 856..946 455 100 Plus
3L 28110227 3L 16077723..16077809 947..1033 435 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:51:10 has no hits.

BS07493.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:34 Download gff for BS07493.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 1..1134 17..1150 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:46:36 Download gff for BS07493.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 110..1254 7..1154 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:58 Download gff for BS07493.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 120..1247 17..1144 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:34 Download gff for BS07493.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 110..1254 7..1154 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:32 Download gff for BS07493.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RE 120..1247 17..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:32 Download gff for BS07493.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16075488..16075764 17..293 100 -> Plus
3L 16076230..16076648 294..712 100 -> Plus
3L 16076982..16077124 713..855 100 -> Plus
3L 16077192..16077282 856..946 100 -> Plus
3L 16077723..16077809 947..1033 100 -> Plus
3L 16078820..16078930 1034..1144 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:58 Download gff for BS07493.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16070082..16070224 713..855 100 -> Plus
arm_3L 16070292..16070382 856..946 100 -> Plus
arm_3L 16070823..16070909 947..1033 100 -> Plus
arm_3L 16068588..16068864 17..293 100 -> Plus
arm_3L 16069330..16069748 294..712 100 -> Plus
arm_3L 16071920..16072030 1034..1144 100   Plus

BS07493.pep Sequence

Translation from 16 to 1149

> BS07493.pep
MSFRSRSRTQAPLSSRRRSLSSSSRMAPSSGGSGAYNYNGSSYSSSGSTG
RPLSTGYFPSSSSASSYQSPYASVYSSRESLYGGGGAGRSSYGSGGGGYD
SSRYNPSSYSSAGSSYSTSDRYVSPYSSSYDKGVTTASLTFKSPGLSSSN
SFKSSRLLKTKSLSASNSSLNGAYGGPSSNGVTSAGATVAAIAATRSNSL
REQERKSRNRTRSKSAAQRSISASSEKSEGYESGSERTSRSRLGSTASTA
TTSESKSSSSNDKTENGDGIDYKALWEAEKLENDKLRQMLKQKDDEAVQT
RATLERFANATTKNSLSELEKRERRAMERKLSELEEELKLLQKLKTENDR
LRAENRALTRVVSKLTTSAQSQLAKSK*

BS07493.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-PE 377 CG32156-PE 1..377 1..377 1843 100 Plus
Mbs-PF 367 CG32156-PF 1..366 1..366 1733 96.4 Plus
Mbs-PQ 1111 CG32156-PQ 686..1111 19..377 745 47.7 Plus
Mbs-PJ 1101 CG32156-PJ 686..1100 19..366 635 43.3 Plus
Mbs-PI 1144 CG32156-PI 729..1143 19..366 635 43.3 Plus