Clone Sequence Records
BS07537.3prime Sequence
375 bp (374 high quality bases) assembled on 2006-01-06
> BS07537.3prime
ATGGTCTAGAAAGCTTTCAGTCCCAGCCGTTCTCCTTGATCATGTGCGCC
AGCTCAATGATGAACTTGCCCTCCTTGTACTTTTGGCTGGACTCATAGGC
GTGCTCATATTTCCAGCCCAGCGGCGTCTTGCAGCACTCGCAGTAGATGT
CCGCCACCGCATGGAGGCCGGTCAGGAGCACACGCTCCTCCGTCTGGCCA
CAGGCCACGTTCACCACCGAGTTGAACAGATAGGCCGGTCCCTGACTGCC
CTGAAACGACTTCGATATGAGCTCGTCGTGGGAGGCGAGGTGGGCGCGGC
AGTGAACACATGAGTATGTCCGATTCGTGGACGGTAGATAGGCCTGAAAC
GTCTTCACCATGTCGACTGATAACT
BS07537.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:49:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15309-PA | 345 | CG15309-RA | 1..345 | 361..17 | 1725 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:06:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15309-RE | 3058 | CG15309-RE | 775..1120 | 361..16 | 1730 | 100 | Minus |
CG15309-RD | 2877 | CG15309-RD | 594..939 | 361..16 | 1730 | 100 | Minus |
CG15309-RC | 2606 | CG15309-RC | 323..668 | 361..16 | 1730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:06:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10207230..10207575 | 16..361 | 1730 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:06:32 has no hits.
BS07537.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:15:45 Download gff for
BS07537.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-PA | 1..345 | 17..361 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:06:46 Download gff for
BS07537.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-PA | 1..345 | 17..361 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 21:28:05 Download gff for
BS07537.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RC | 317..676 | 9..367 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:52:27 Download gff for
BS07537.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RC | 317..676 | 9..367 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:52:27 Download gff for
BS07537.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10207222..10207581 | 9..367 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 21:28:05 Download gff for
BS07537.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10101255..10101614 | 9..367 | 98 | | Plus |
BS07537.5prime Sequence
375 bp (374 high quality bases) assembled on 2006-01-06
> BS07537.5prime
GAAGTTATCAGTCGACATGGTGAAGACGTTTCAGGCCTATCTACCGTCCA
CGAATCGGACATACTCATGTGTTCACTGCCGCGCCCACCTCGCCTCCCAC
GACGAGCTCATATCGAAGTCGTTTCAGGGCAGTCAGGGACCGGCCTATCT
GTTCAACTCGGTGGTGAACGTGGCCTGTGGCCAGACGGAGGAGCGTGTGC
TCCTGACCGGCCTCCATGCGGTGGCGGACATCTACTGCGAGTGCTGCAAG
ACGCCGCTGGGCTGGAAATATGAGCACGCCTATGAGTCCAGCCAAAAGTA
CAAGGAGGGCAAGTTCATCATTGAGCTGGCGCACATGATCAAGGAGAACG
GCTGGGACTGAAAGCTTTCTAGACC
BS07537.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:49:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15309-PA | 345 | CG15309-RA | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:20:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15309-RE | 3058 | CG15309-RE | 775..1120 | 17..362 | 1730 | 100 | Plus |
CG15309-RD | 2877 | CG15309-RD | 594..939 | 17..362 | 1730 | 100 | Plus |
CG15309-RC | 2606 | CG15309-RC | 323..668 | 17..362 | 1730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:20:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10207230..10207575 | 362..17 | 1730 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 12:20:07 has no hits.
BS07537.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:15:46 Download gff for
BS07537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-PA | 1..345 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:06:47 Download gff for
BS07537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-PA | 1..345 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:59:16 Download gff for
BS07537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RC | 317..676 | 11..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:05:26 Download gff for
BS07537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RC | 317..676 | 11..369 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:05:26 Download gff for
BS07537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10207222..10207581 | 11..369 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:59:16 Download gff for
BS07537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10101255..10101614 | 11..369 | 98 | | Minus |
BS07537.complete Sequence
377 bp (377 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635897
> BS07537.complete
GAAGTTATCAGTCGACATGGTGAAGACGTTTCAGGCCTATCTACCGTCCA
CGAATCGGACATACTCATGTGTTCACTGCCGCGCCCACCTCGCCTCCCAC
GACGAGCTCATATCGAAGTCGTTTCAGGGCAGTCAGGGACCGGCCTATCT
GTTCAACTCGGTGGTGAACGTGGCCTGTGGCCAGACGGAGGAGCGTGTGC
TCCTGACCGGCCTCCATGCGGTGGCGGACATCTACTGCGAGTGCTGCAAG
ACGCCGCTGGGCTGGAAATATGAGCACGCCTATGAGTCCAGCCAAAAGTA
CAAGGAGGGCAAGTTCATCATTGAGCTGGCGCACATGATCAAGGAGAACG
GCTGGGACTGAAAGCTTTCTAGACCAT
BS07537.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:12:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15309-RE | 345 | CG15309-PE | 1..345 | 17..361 | 1725 | 100 | Plus |
CG15309-RD | 345 | CG15309-PD | 1..345 | 17..361 | 1725 | 100 | Plus |
CG15309-RC | 345 | CG15309-PC | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15309-RE | 3058 | CG15309-RE | 775..1120 | 17..362 | 1730 | 100 | Plus |
CG15309-RD | 2877 | CG15309-RD | 594..939 | 17..362 | 1730 | 100 | Plus |
CG15309-RC | 2606 | CG15309-RC | 323..668 | 17..362 | 1730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10207230..10207575 | 362..17 | 1730 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:12:03 has no hits.
BS07537.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:28 Download gff for
BS07537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RB | 1..345 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:46:27 Download gff for
BS07537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RB | 908..1267 | 11..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:13 Download gff for
BS07537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RC | 323..666 | 17..360 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:28 Download gff for
BS07537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RB | 908..1267 | 11..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:13:01 Download gff for
BS07537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15309-RC | 323..666 | 17..360 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:13:01 Download gff for
BS07537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10207232..10207575 | 17..360 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:13 Download gff for
BS07537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10101265..10101608 | 17..360 | 100 | | Minus |
BS07537.pep Sequence
Translation from 16 to 360
> BS07537.pep
MVKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVV
NVACGQTEERVLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKF
IIELAHMIKENGWD*
BS07537.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15309-PE | 114 | CG15309-PE | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PD | 114 | CG15309-PD | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PC | 114 | CG15309-PC | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PB | 114 | CG15309-PB | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PA | 114 | CG15309-PA | 1..114 | 1..114 | 623 | 100 | Plus |