Clone BS07583 Report

Search the DGRC for BS07583

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:75
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG8931-RA
Protein status:BS07583.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07583.3prime Sequence

955 bp (796 high quality bases) assembled on 2006-01-06

> BS07583.3prime
ATGGTCTAGAAAGCTTCTAGTCTTGTGAATTCTGCCCAAGACTAATCTCC
CCCATTTCGGTACTGGAAAGGCTTGGCGACAAGGTCGTGGACCTGGAGTT
GCAAGCATTCTCATCCAGATTATAGTAATTCACTATTCGCTGTGGTGGTC
GGTTGGAGATGACCTCTACGATTTGATTCACAACCCATTTGGTCAATTTG
ATGACGGCCACGTGTGCCGCAAACTGCAGGATCATGGCTCCAAAGCCCTT
GTAGAGGCCACTAACTCCCTCGGAGACAATCGTTGTCTGATAGCAATCGA
CGACTCCTTGATAGTTTGTTAGAATGGGTACGACATCGTAGCCATTGTCG
AGGTTGTCGATTATAGTTCGTGTTCCCTGCAATTGCAGACGGTGTAGAAT
CGTTTCGAACGGGAAGAACATGACCTCAGTGGTTATGATAGCAATAAGGC
TGGCATAGATGTCCGCATTCTGTTGTTCCAGCGTGGTGTCCTGATACTTT
CCACCCTGGCCGTCCTGGGAATTCTTTATACGAAGCCGCATTATGCGTGA
GGACACGCCCCGTATCACGAGATTAAACAGATACTTGGTGATGCCAAAGG
AGACACTTGGCCCGATTAGAGCCCAGGCTGGTAGCATACGGCCCTTTTGC
GGAGAGCTCCAATAAAACAAGCGCAGACTTCCCTCCCGGAATACATCGAA
TAGACCGGGTTTCTCGCTGGCAATATCACTCTGCACCGTTTCGACGAGAG
AAGCTGCATAGAAGGGCACCACCAGGCCGATACTTATGCATTTGAGCAGG
AGATGCTGTCCGAAACGCTTTAGCGTGGTGCGACTATTCACATCCTTGGG
CCAGCTGGTCACCTTCGAGATAAAGTCGTCGATGGCCAGCGTCATGCCGC
GCACCAGTAGGCAGCTGCCCACGCCCTTTCACAGGGTCGTCAGTCCCTGC
CTTCT

BS07583.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-PA 1266 CG8931-RA 328..1266 955..17 4670 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 16:08:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-RA 1454 CG8931-RA 476..1414 955..17 4680 99.9 Minus
CG5755-RA 1553 CG5755-RA 554..1306 946..185 300 70.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 16:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15984593..15985365 789..17 3865 100 Minus
X 23542271 X 15984372..15984538 955..789 820 99.4 Minus
2L 23513712 2L 18097121..18097529 946..538 260 70.9 Minus
Blast to na_te.dros performed on 2015-01-31 16:08:50 has no hits.

BS07583.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:17:08 Download gff for BS07583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-PA 328..1266 17..955 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:08:45 Download gff for BS07583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-PA 328..1266 17..955 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:21:03 Download gff for BS07583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 476..1416 11..955 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:40:13 Download gff for BS07583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 476..1416 11..955 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:40:13 Download gff for BS07583.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15984372..15984538 789..955 99 -> Minus
X 15984594..15985367 11..788 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:21:03 Download gff for BS07583.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15878405..15878571 789..955 99 -> Minus
arm_X 15878627..15879400 11..788 99   Minus

BS07583.5prime Sequence

881 bp (879 high quality bases) assembled on 2006-01-06

> BS07583.5prime
GAAGTTATCAGTCGACATGGCGGGAATGAATGAGTACTCTAGCCTAAAAT
TTCAAGCGGAGTATGAAACGCACGATGATCACCTGGGCAAGGAGCATCGG
ACTGGGGACCGGGATCAACATTTACCCGTGACCTATGGCCCTAGCAAACA
CTTGGGAAGCAGCCTTGAAGAGCGCGAGAAGGCGATTGTGGACGTCGTCG
GCGTACAGTGGGTCTCCCTGGTCACCGAGAACCTGCTTAGCCATCCGTTT
GTGGTGCTGCGCCGCCAGTGCCAGGTGTACAATGCCTCGAGACGCTATCA
TTTGCATCCCTTTCAGCTTCTGCCCAGCATCGTCCACCTGCACAGAAGGC
AGGGACTGACGACCCTGTGGAAGGGCGTGGGCAGCTGCCTACTGGTGCGC
GGCATGACGCTGGCCATCGACGACTTTATCTCGAAGGTGACCAGCTGGCC
CAAGGATGTGAATAGTCGCACCACGCTAAAGCGTTTCGGACAGCATCTCC
TGCTCAAATGCATAAGTATCGGCCTGGTGGTGCCCTTCTATGCAGCTTCT
CTCGTCGAAACGGTGCAGAGTGATATTGCCAGCGAGAAACCCGGTCTATT
CGATGTATTCCGGGAGGGAAGTCTGCGCTTGTTTTATTGGAGCTCTCCGC
AAAAGGGCCGTATGCTACCAGCCTGGGCTCTAATCGGGCCAAGTGTCTCC
TTTGGCATCACCAAGTATCTGTTTAATCTCGTGATACGGGGCGTGTCCTC
ACGCATAATGCGGCTTCGTATAAAGAATTCCCAGGACGGCCAGGGTGGAA
AGTATCAGGACACCACGCTGGAACAACAGAATGCGGACATCTATGCCAGC
CTTATTGCTATCATAACCACTGAGGTCATGT

BS07583.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-PA 1266 CG8931-RA 1..865 17..881 4325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-RA 1454 CG8931-RA 149..1013 17..881 4325 100 Plus
CG5755-RA 1553 CG5755-RA 395..962 194..761 440 72.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:17:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15984593..15984964 510..881 1860 100 Plus
X 23542271 X 15984188..15984538 160..510 1755 100 Plus
X 23542271 X 15984014..15984127 49..162 570 100 Plus
2L 23513712 2L 18096962..18097529 194..761 425 71.7 Plus
Blast to na_te.dros performed on 2015-02-12 06:17:19 has no hits.

BS07583.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:17:09 Download gff for BS07583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-PA 1..865 17..881 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:08:46 Download gff for BS07583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-PA 1..865 17..881 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:02:07 Download gff for BS07583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 145..1013 10..881 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:02:35 Download gff for BS07583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 145..1013 10..881 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:02:35 Download gff for BS07583.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15984014..15984127 49..162 100 -> Plus
X 15984191..15984538 163..510 100 -> Plus
X 15984594..15984964 511..881 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:02:07 Download gff for BS07583.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15878047..15878160 49..162 100 -> Plus
arm_X 15878224..15878571 163..510 100 -> Plus
arm_X 15878627..15878997 511..881 100   Plus

BS07583.complete Sequence

1298 bp (1298 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635910

> BS07583.complete
GAAGTTATCAGTCGACATGGCGGGAATGAATGAGTACTCTAGCCTAAAAT
TTCAAGCGGAGTATGAAACGCACGATGATCACCTGGGCAAGGAGCATCGG
ACTGGGGACCGGGATCAACATTTACCCGTGACCTATGGCCCTAGCAAACA
CTTGGGAAGCAGCCTTGAAGAGCGCGAGAAGGCGATTGTGGACGTCGTCG
GCGTACAGTGGGTCTCCCTGGTCACCGAGAACCTGCTTAGCCATCCGTTT
GTGGTGCTGCGCCGCCAGTGCCAGGTGTACAATGCCTCGAGACGCTATCA
TTTGCATCCCTTTCAGCTTCTGCCCAGCATCGTCCACCTGCACAGAAGGC
AGGGACTGACGACCCTGTGGAAGGGCGTGGGCAGCTGCCTACTGGTGCGC
GGCATGACGCTGGCCATCGACGACTTTATCTCGAAGGTGACCAGCTGGCC
CAAGGATGTGAATAGTCGCACCACGCTAAAGCGTTTCGGACAGCATCTCC
TGCTCAAATGCATAAGTATCGGCCTGGTGGTGCCCTTCTATGCAGCTTCT
CTCGTCGAAACGGTGCAGAGTGATATTGCCAGCGAGAAACCCGGTCTATT
CGATGTATTCCGGGAGGGAAGTCTGCGCTTGTTTTATTGGAGCTCTCCGC
AAAAGGGCCGTATGCTACCAGCCTGGGCTCTAATCGGGCCAAGTGTCTCC
TTTGGCATCACCAAGTATCTGTTTAATCTCGTGATACGGGGCGTGTCCTC
ACGCATAATGCGGCTTCGTATAAAGAATTCCCAGGACGGCCAGGGTGGAA
AGTATCAGGACACCACGCTGGAACAACAGAATGCGGACATCTATGCCAGC
CTTATTGCTATCATAACCACTGAGGTCATGTTCTTCCCGTTCGAAACGAT
TCTACACCGTCTGCAATTGCAGGGAACACGAACTATAATCGACAACCTCG
ACAATGGCTACGATGTCGTACCCATTCTAACAAACTATCAAGGAGTCGTC
GATTGCTATCAGACAACGATTGTCTCCGAGGGAGTTAGTGGCCTCTACAA
GGGCTTTGGAGCCATGATCCTGCAGTTTGCGGCACACGTGGCCGTCATCA
AATTGACCAAATGGGTTGTGAATCAAATCGTAGAGGTCATCTCCAACCGA
CCACCACAGCGAATAGTGAATTACTATAATCTGGATGAGAATGCTTGCAA
CTCCAGGTCCACGACCTTGTCGCCAAGCCTTTCCAGTACCGAAATGGGGG
AGATTAGTCTTGGGCAGAATTCACAAGACTAGAAGCTTTCTAGACCAT

BS07583.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-RA 1266 CG8931-PA 1..1266 17..1282 6330 100 Plus
CG5755-RA 1353 CG5755-PA 271..838 194..761 425 71.7 Plus
CG5755-RA 1353 CG5755-PA 885..1182 817..1114 230 71.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-RA 1454 CG8931-RA 149..1414 17..1282 6330 100 Plus
CG5755-RA 1553 CG5755-RA 395..962 194..761 425 71.7 Plus
CG5755-RA 1553 CG5755-RA 1009..1306 817..1114 230 71.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15984593..15985365 510..1282 3865 100 Plus
X 23542271 X 15984188..15984538 160..510 1755 100 Plus
X 23542271 X 15984014..15984127 49..162 570 100 Plus
2L 23513712 2L 18096962..18097529 194..761 425 71.7 Plus
2L 23513712 2L 18097576..18097873 817..1114 230 71.8 Plus
Blast to na_te.dros performed on 2014-11-28 00:30:00 has no hits.

BS07583.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:27 Download gff for BS07583.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 1..1266 17..1282 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:53:28 Download gff for BS07583.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 143..1414 10..1288 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:53:28 Download gff for BS07583.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 149..1414 17..1282 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:27 Download gff for BS07583.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 143..1414 10..1288 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:21:31 Download gff for BS07583.complete
Subject Subject Range Query Range Percent Splice Strand
CG8931-RA 149..1414 17..1282 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:21:31 Download gff for BS07583.complete
Subject Subject Range Query Range Percent Splice Strand
X 15983920..15983951 17..48 100 -> Plus
X 15984014..15984127 49..162 100 -> Plus
X 15984191..15984538 163..510 100 -> Plus
X 15984594..15985365 511..1282 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:53:28 Download gff for BS07583.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15877953..15877984 17..48 100 -> Plus
arm_X 15878047..15878160 49..162 100 -> Plus
arm_X 15878224..15878571 163..510 100 -> Plus
arm_X 15878627..15879398 511..1282 100   Plus

BS07583.pep Sequence

Translation from 16 to 1281

> BS07583.pep
MAGMNEYSSLKFQAEYETHDDHLGKEHRTGDRDQHLPVTYGPSKHLGSSL
EEREKAIVDVVGVQWVSLVTENLLSHPFVVLRRQCQVYNASRRYHLHPFQ
LLPSIVHLHRRQGLTTLWKGVGSCLLVRGMTLAIDDFISKVTSWPKDVNS
RTTLKRFGQHLLLKCISIGLVVPFYAASLVETVQSDIASEKPGLFDVFRE
GSLRLFYWSSPQKGRMLPAWALIGPSVSFGITKYLFNLVIRGVSSRIMRL
RIKNSQDGQGGKYQDTTLEQQNADIYASLIAIITTEVMFFPFETILHRLQ
LQGTRTIIDNLDNGYDVVPILTNYQGVVDCYQTTIVSEGVSGLYKGFGAM
ILQFAAHVAVIKLTKWVVNQIVEVISNRPPQRIVNYYNLDENACNSRSTT
LSPSLSSTEMGEISLGQNSQD*

BS07583.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG8931-PA 421 CG8931-PA 1..421 1..421 2181 100 Plus
CG5755-PA 450 CG5755-PA 2..449 6..421 1285 57.8 Plus