Clone Sequence Records
BS07633.3prime Sequence
915 bp (819 high quality bases) assembled on 2006-01-06
> BS07633.3prime
ATGGTCTAGAAAGCTTTTAGTAGTCGTAGGTGTTCGTTGCCGTGGTGGTC
TCGTCCAGCGGCACGAACATGTCCATTTTTTCGTAGTCCTGCGGCGTTAT
GTGCTTGTGGCTGGTCCACATGGCATACGCCTTCTGGTCGGTAGCTGTCA
GGGGCTTGAAGTTCTTCGGATCGGTCGTTTCCGACATGCTGAGCTTGGAG
TTGTAGCGTGTGTACATGAAGATGCGGTACCGCCAGGCGTCAAAGGTCTG
CTTCCAGTCCTCTACGTTCTTTACGGCGCCTTGGGGAACACTATTCAGCA
TGTGGGCCAATTTTGCCCACAATGGTTCAGTGAGGCCATCGTGCCGGCGG
TGGTTTGATAGCATGCATGGATTGTCCTCGAAAAACTTAACGTACAGCTC
CTTTTGGTCCTTGGACATGCGTTCGCCGCGTTTTCTAAAGCGACTCATCA
GACCCGGTGTGTAAGGCGACTGTTGGGAGGTATTTGGTGCATTCATCGAC
GGCAAAGGATGCGTGTAGCTGGGGAAGATCTGCTGACCGGGCAGCAACTG
CTGCTGGTGCTGTTGCTGCTGGGCTTGGTGCTGTTCCTGGCGCGCTAGGA
ATCTGGAGGCCCGCTGCAGACGTTCCACCTCCGATTCGGACTCCGACTTG
GGTATAATATCCATGGGGTCAATGGCCTGGGTCATCGATTCCGGCGTCCG
TTCCGAGTAAGCCTGCCCCAGGCGCAGTTTGTGGGAACTATCCGTGCGTT
CCGGCACCGAGTTGTTGCCCTGCTGGTCCAGTGGCGAGTCCACCGCCTCA
GAACTCATACGTAGGGCCGGAGAGGTGGGCTGGGAGTCAGGCACATATTC
ATGGGCGTGGTGCGAGGCGCTTTCGTTTGACCGCTGCGGCAGAGGCACGT
GGTGCTGGTGCTGAT
BS07633.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12022-PA | 951 | CG12022-RA | 53..951 | 915..17 | 4495 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:03:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RE | 1577 | CG42676-RE | 601..1500 | 915..16 | 4500 | 100 | Minus |
| CG42676-RC | 1411 | CG42676-RC | 435..1334 | 915..16 | 4500 | 100 | Minus |
| CG42676-RF | 1668 | CG42676-RF | 1104..1221 | 309..192 | 185 | 78.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:03:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1803873..1804355 | 915..433 | 2415 | 100 | Minus |
| 3L | 28110227 | 3L | 1804417..1804833 | 432..16 | 2085 | 100 | Minus |
| 3L | 28110227 | 3L | 1806356..1806473 | 309..192 | 185 | 77.1 | Minus |
Blast to na_te.dros performed 2015-02-12 19:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2781..2849 | 598..530 | 174 | 72.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6856 | 593..548 | 158 | 82.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6819 | 593..531 | 153 | 71.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6785 | 593..544 | 151 | 78 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2383 | 591..514 | 149 | 67.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..6823 | 593..548 | 149 | 80.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1565 | 610..548 | 137 | 71.4 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1149 | 588..549 | 137 | 82.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6865 | 593..519 | 134 | 65.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1541..1586 | 593..548 | 131 | 76.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2380 | 593..549 | 126 | 75.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2351..2431 | 593..514 | 123 | 63 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6795 | 585..514 | 120 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2446..2518 | 585..514 | 119 | 64.4 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7943..8022 | 583..508 | 119 | 66.2 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9387..9466 | 583..508 | 119 | 66.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1134 | 593..531 | 117 | 65.1 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 95..196 | 625..530 | 117 | 63.1 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9125..9226 | 625..530 | 117 | 63.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2825 | 590..530 | 116 | 65.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2470 | 593..514 | 114 | 61.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1164 | 593..546 | 114 | 70.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2659 | 592..549 | 112 | 72.7 | Minus |
BS07633.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:40 Download gff for
BS07633.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 53..951 | 17..915 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:10:53 Download gff for
BS07633.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 53..951 | 17..915 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:51:43 Download gff for
BS07633.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 435..1334 | 16..915 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:52:42 Download gff for
BS07633.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 435..1334 | 16..915 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:52:42 Download gff for
BS07633.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1804417..1804833 | 16..432 | 100 | | Minus |
| 3L | 1803873..1804355 | 433..915 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:51:43 Download gff for
BS07633.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1803873..1804355 | 433..915 | 100 | -> | Minus |
| arm_3L | 1804417..1804833 | 16..432 | 100 | | Minus |
BS07633.5prime Sequence
826 bp (800 high quality bases) assembled on 2006-01-06
> BS07633.5prime
GAAGTTATCAGTCGACATGCTCTCCTACGAGCCCTCATGCTCGATGGCGG
TCCTGAAGCACCACCCTCATCAGCACCAGCACCACGTGCCTCTGCCGCAG
CGGTCAAACGAAAGCGCCTCGCACCACGCCCATGAATATGTGCCTGACTC
CCAGCCCACCTCTCCGGCCCTACGTATGAGTTCTGAGGCGGTGGACTCGC
CACTGGACCAGCAGGGCAACAACTCGGTGCCGGAACGCACGGATAGTTCC
CACAAACTGCGCCTGGGGCAGGCTTACTCGGAACGGACGCCGGAATCGAT
GACCCAGGCCATTGACCCCATGGATATTATACCCAAGTCGGAGTCCGAAT
CGGAGGTGGAACGTCTGCAGCGGGCCTCCAGATTCCTAGCGCGCCAGGAA
CAGCACCAAGCCCAGCAGCAACAGCACCAGCAGCAGTTGCTGCCCGGTCA
GCAGATCTTCCCCAGCTACACGCATCCTTTGCCGTCGATGAATGCACCAA
ATACCTCCCAACAGTCGCCTTACACACCGGGTCTGATGAGTCGCTTTAGA
AAACGCGGCGAACGCATGTCCAAGGACCAAAAGGAGCTGTACGTTAAGTT
TTTCGAGGACAATCCATGCATGCTATCAAACCACCGCCGGCACGATGGCC
TCACTGAACCATTGTGGGCAAAATTGGCCCACATGCTGAATAGTGTTCCC
CAAGGCGCCGTANAGAACGTAGAGGACTGGAAGCAGACCTTTGACGCCTG
GCGGTACCGCATCTTCATGTACACACGCTACAACTCCAAGCTCAGCATGT
CGGAAACGACCGATCCGAAGAACTTT
BS07633.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12022-PA | 951 | CG12022-RA | 1..809 | 17..825 | 4026 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 03:53:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RE | 1577 | CG42676-RE | 549..1357 | 17..825 | 4034 | 99.9 | Plus |
| CG42676-RC | 1411 | CG42676-RC | 383..1191 | 17..825 | 4034 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 03:52:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1803821..1804355 | 17..551 | 2675 | 100 | Plus |
| 3L | 28110227 | 3L | 1804417..1804690 | 552..825 | 1359 | 99.6 | Plus |
Blast to na_te.dros performed 2015-02-10 03:52:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2781..2849 | 386..454 | 174 | 72.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6856 | 391..436 | 158 | 82.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6819 | 391..453 | 153 | 71.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6785 | 391..440 | 151 | 78 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2383 | 393..470 | 149 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..6823 | 391..436 | 149 | 80.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1565 | 374..436 | 137 | 71.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1149 | 396..435 | 137 | 82.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6865 | 391..465 | 134 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1541..1586 | 391..436 | 131 | 76.1 | Plus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 81..135 | 112..58 | 131 | 70.9 | Minus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 2840..2894 | 112..58 | 131 | 70.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2380 | 391..435 | 126 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2351..2431 | 391..470 | 123 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6795 | 399..470 | 120 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2446..2518 | 399..470 | 119 | 64.4 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7943..8022 | 401..476 | 119 | 66.2 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9387..9466 | 401..476 | 119 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1134 | 391..453 | 117 | 65.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 95..196 | 359..454 | 117 | 63.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9125..9226 | 359..454 | 117 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2825 | 394..454 | 116 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2470 | 391..470 | 114 | 61.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1164 | 391..438 | 114 | 70.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2659 | 392..435 | 112 | 72.7 | Plus |
BS07633.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:41 Download gff for
BS07633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 1..809 | 17..826 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:10:55 Download gff for
BS07633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 1..809 | 17..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:46:19 Download gff for
BS07633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 378..1191 | 10..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:20:07 Download gff for
BS07633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 378..1191 | 10..826 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:20:07 Download gff for
BS07633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1803816..1804355 | 10..551 | 99 | -> | Plus |
| 3L | 1804417..1804690 | 552..826 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:46:19 Download gff for
BS07633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1803816..1804355 | 10..551 | 99 | -> | Plus |
| arm_3L | 1804417..1804690 | 552..826 | 99 | | Plus |
BS07633.complete Sequence
983 bp (983 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635927
> BS07633.complete
GAAGTTATCAGTCGACATGCTCTCCTACGAGCCCTCATGCTCGATGGCGG
TCCTGAAGCACCACCCTCATCAGCACCAGCACCACGTGCCTCTGCCGCAG
CGGTCAAACGAAAGCGCCTCGCACCACGCCCATGAATATGTGCCTGACTC
CCAGCCCACCTCTCCGGCCCTACGTATGAGTTCTGAGGCGGTGGACTCGC
CACTGGACCAGCAGGGCAACAACTCGGTGCCGGAACGCACGGATAGTTCC
CACAAACTGCGCCTGGGGCAGGCTTACTCGGAACGGACGCCGGAATCGAT
GACCCAGGCCATTGACCCCATGGATATTATACCCAAGTCGGAGTCCGAAT
CGGAGGTGGAACGTCTGCAGCGGGCCTCCAGATTCCTAGCGCGCCAGGAA
CAGCACCAAGCCCAGCAGCAACAGCACCAGCAGCAGTTGCTGCCCGGTCA
GCAGATCTTCCCCAGCTACACGCATCCTTTGCCGTCGATGAATGCACCAA
ATACCTCCCAACAGTCGCCTTACACACCGGGTCTGATGAGTCGCTTTAGA
AAACGCGGCGAACGCATGTCCAAGGACCAAAAGGAGCTGTACGTTAAGTT
TTTCGAGGACAATCCATGCATGCTATCAAACCACCGCCGGCACGATGGCC
TCACTGAACCATTGTGGGCAAAATTGGCCCACATGCTGAATAGTGTTCCC
CAAGGCGCCGTAAAGAACGTAGAGGACTGGAAGCAGACCTTTGACGCCTG
GCGGTACCGCATCTTCATGTACACACGCTACAACTCCAAGCTCAGCATGT
CGGAAACGACCGATCCGAAGAACTTCAAGCCCCTGACAGCTACCGACCAG
AAGGCGTATGCCATGTGGACCAGCCACAAGCACATAACGCCGCAGGACTA
CGAAAAAATGGACATGTTCGTGCCGCTGGACGAGACCACCACGGCAACGA
ACACCTACGACTACTAAAAGCTTTCTAGACCAT
BS07633.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:15:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RC | 1230 | CG42676-PC | 280..1230 | 17..967 | 4755 | 100 | Plus |
| CG42676-RF | 1284 | CG42676-PF | 1001..1118 | 675..792 | 185 | 77.1 | Plus |
| CG42676-RD | 1284 | CG42676-PD | 1001..1118 | 675..792 | 185 | 77.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:15:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RE | 1577 | CG42676-RE | 549..1500 | 17..968 | 4760 | 100 | Plus |
| CG42676-RC | 1411 | CG42676-RC | 383..1334 | 17..968 | 4760 | 100 | Plus |
| CG42676-RF | 1668 | CG42676-RF | 1104..1221 | 675..792 | 185 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:15:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1803821..1804355 | 17..551 | 2675 | 100 | Plus |
| 3L | 28110227 | 3L | 1804417..1804833 | 552..968 | 2085 | 100 | Plus |
| 3L | 28110227 | 3L | 1806356..1806473 | 675..792 | 185 | 77.1 | Plus |
Blast to na_te.dros performed 2014-11-27 20:15:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2781..2849 | 386..454 | 174 | 72.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6856 | 391..436 | 158 | 82.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6819 | 391..453 | 153 | 71.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6785 | 391..440 | 151 | 78 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2383 | 393..470 | 149 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..6823 | 391..436 | 149 | 80.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1565 | 374..436 | 137 | 71.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1149 | 396..435 | 137 | 82.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6865 | 391..465 | 134 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1541..1586 | 391..436 | 131 | 76.1 | Plus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 81..135 | 112..58 | 131 | 70.9 | Minus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 2840..2894 | 112..58 | 131 | 70.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2380 | 391..435 | 126 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2351..2431 | 391..470 | 123 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6795 | 399..470 | 120 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2446..2518 | 399..470 | 119 | 64.4 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7943..8022 | 401..476 | 119 | 66.2 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9387..9466 | 401..476 | 119 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1134 | 391..453 | 117 | 65.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 95..196 | 359..454 | 117 | 63.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9125..9226 | 359..454 | 117 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2825 | 394..454 | 116 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2470 | 391..470 | 114 | 61.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1164 | 391..438 | 114 | 70.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2659 | 392..435 | 112 | 72.7 | Plus |
BS07633.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:19 Download gff for
BS07633.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-RA | 1..951 | 17..967 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:53:18 Download gff for
BS07633.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-RA | 521..1477 | 10..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:45 Download gff for
BS07633.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 383..1331 | 17..965 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:19 Download gff for
BS07633.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-RA | 521..1477 | 10..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:19 Download gff for
BS07633.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 383..1331 | 17..965 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:19 Download gff for
BS07633.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1803821..1804355 | 17..551 | 100 | -> | Plus |
| 3L | 1804417..1804830 | 552..965 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:45 Download gff for
BS07633.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1803821..1804355 | 17..551 | 100 | -> | Plus |
| arm_3L | 1804417..1804830 | 552..965 | 100 | | Plus |
BS07633.pep Sequence
Translation from 16 to 966
> BS07633.pep
MLSYEPSCSMAVLKHHPHQHQHHVPLPQRSNESASHHAHEYVPDSQPTSP
ALRMSSEAVDSPLDQQGNNSVPERTDSSHKLRLGQAYSERTPESMTQAID
PMDIIPKSESESEVERLQRASRFLARQEQHQAQQQQHQQQLLPGQQIFPS
YTHPLPSMNAPNTSQQSPYTPGLMSRFRKRGERMSKDQKELYVKFFEDNP
CMLSNHRRHDGLTEPLWAKLAHMLNSVPQGAVKNVEDWKQTFDAWRYRIF
MYTRYNSKLSMSETTDPKNFKPLTATDQKAYAMWTSHKHITPQDYEKMDM
FVPLDETTTATNTYDY*
BS07633.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:26:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-PC | 409 | CG42676-PC | 94..409 | 1..316 | 1699 | 100 | Plus |
| CG42676-PF | 427 | CG42676-PF | 144..422 | 15..307 | 426 | 37 | Plus |
| CG42676-PD | 427 | CG13923-PB | 144..422 | 15..307 | 426 | 37 | Plus |
