Clone BS07638 Report

Search the DGRC for BS07638

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:76
Well:38
Vector:pDNR-Dual
Associated Gene/TranscriptCG15772-RA
Protein status:BS07638.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07638.3prime Sequence

810 bp (809 high quality bases) assembled on 2006-01-06

> BS07638.3prime
ATGGTCTAGAAAGCTTTTACTCCTGCCACTGCATTCCGAATCGCTGCTCA
AAGGTGATCCGGTTAAAGACGCCCGCATCGGCCAGCTGCAAGGGATCGGT
GTAGTACGCAAAACGCCGTATATCCAGCATGGCCAGGTCGAACATTTGCT
TCCAGCTGGTCAAATCTGTAACGCTCATGTGGATCGGCAGCTGGGGATCC
GGTATATCGATGGCCGCCTGCAGACGGTCAAACGCCTCGGCAATTGGTCC
CACCGATAGATTAACCCAGTACTCCGCTGGAAAGCGCTTGTTCTCACAAA
ACGGCGCTCCCTTGCGCATGATGAAGACCAGCATGAGTATCTCATAGCGC
TCGGAGCTCTCATAGAAGCGCTTGGTTCGGGTCTTCTCCACGAAATCGAT
GAGAAGGATCAGGGGAGTGTAGTTCTGGAGGTGCATCAACAGCTCCCGGT
CGGTCCAAAGGTAACGGCCGCCTTTGACGGTCAGCAGGCTCATGTTGCTG
GCGAGTTGTTGATGCTGCTGCTGCTGCTGTTGCTGCTGCAGCTGGTGGTG
TTGCTGCTGCTGAAGGTGTTGCTGTTGCTGCTGCTGATGTTGGTGTTGCT
GCTGCTGTTGCTGCTGGTGTTGCTGGTGCTGCTGCTGCTGGTGTTGCTGC
TGCTGGTGCTGCTGGTGTTGCTGCTGCTGATGCTGCTGGTGAATGCCGCC
GGCGGATGGGGCTGGAGTTCCGGTGTTGGATGCCACCTGGCTGGGCATGG
CGACCACAATGCCCGTCTGTCTCTGGCAGCCAATCTCCTCCACCATGTCG
ACTGATAACT

BS07638.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15772-PA 780 CG15772-RA 1..780 796..17 3900 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15772-RB 1691 CG15772-RB 517..1298 798..17 3910 100 Minus
CG15772-RA 1346 CG15772-RA 178..959 798..17 3910 100 Minus
lin-52-RB 1360 CG15929-RB 1102..1360 17..275 1295 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:56:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5752867..5753648 798..17 3910 100 Minus
Blast to na_te.dros performed on 2015-02-11 09:56:09 has no hits.

BS07638.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:51 Download gff for BS07638.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-PA 1..780 17..796 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:07 Download gff for BS07638.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-PA 1..780 17..796 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:59:18 Download gff for BS07638.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 178..959 17..798 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:07:10 Download gff for BS07638.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 178..959 17..798 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:07:10 Download gff for BS07638.3prime
Subject Subject Range Query Range Percent Splice Strand
X 5752857..5753648 17..810 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:59:18 Download gff for BS07638.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5646890..5647681 17..810 99   Minus

BS07638.5prime Sequence

810 bp (809 high quality bases) assembled on 2006-01-06

> BS07638.5prime
GAAGTTATCAGTCGACATGGTGGAGGAGATTGGCTGCCAGAGACAGACGG
GCATTGTGGTCGCCATGCCCAGCCAGGTGGCATCCAACACCGGAACTCCA
GCCCCATCCGCCGGCGGCATTCACCAGCAGCATCAGCAGCAGCAACACCA
GCAGCACCAGCAGCAGCAACACCAGCAGCAGCAGCACCAGCAACACCAGC
AGCAACAGCAGCAGCAACACCAACATCAGCAGCAGCAACAGCAACACCTT
CAGCAGCAGCAACACCACCAGCTGCAGCAGCAACAGCAGCAGCAGCAGCA
TCAACAACTCGCCAGCAACATGAGCCTGCTGACCGTCAAAGGCGGCCGTT
ACCTTTGGACCGACCGGGAGCTGTTGATGCACCTCCAGAACTACACTCCC
CTGATCCTTCTCATCGATTTCGTGGAGAAGACCCGAACCAAGCGCTTCTA
TGAGAGCTCCGAGCGCTATGAGATACTCATGCTGGTCTTCATCATGCGCA
AGGGAGCGCCGTTTTGTGAGAACAAGCGCTTTCCAGCGGAGTACTGGGTT
AATCTATCGGTGGGACCAATTGCCGAGGCGTTTGACCGTCTGCAGGCGGC
CATCGATATACCGGATCCCCAGCTGCCGATCCACATGAGCGTTACAGATT
TGACCAGCTGGAAGCAAATGTTCGACCTGGCCATGCTGGATATACGGCGT
TTTGCGTACTACACCGATCCCTTGCAGCTGGCCGATGCGGGCGTCTTTAA
CCGGATCACCTTTGAGCAGCGATTCGGAATGCAGTGGCAGGAGTAAAAGC
TTTCTAGACC

BS07638.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15772-PA 780 CG15772-RA 1..780 17..796 3900 100 Plus
CG1343-PB 1563 Sp1-RB 1268..1355 120..207 190 88.6 Plus
CG1343-PA 2076 Sp1-RA 1781..1868 120..207 190 88.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 10:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15772-RB 1691 CG15772-RB 517..1298 15..796 3910 100 Plus
CG15772-RA 1346 CG15772-RA 178..959 15..796 3910 100 Plus
lin-52-RB 1360 CG15929-RB 1102..1360 796..538 1295 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 10:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5752867..5753648 15..796 3910 100 Plus
Blast to na_te.dros performed on 2015-02-02 10:30:38 has no hits.

BS07638.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:52 Download gff for BS07638.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-PA 1..780 17..796 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:08 Download gff for BS07638.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-PA 1..780 17..796 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:30:03 Download gff for BS07638.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 178..959 15..796 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:39:44 Download gff for BS07638.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 178..959 15..796 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:39:44 Download gff for BS07638.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5752858..5753648 5..796 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:30:03 Download gff for BS07638.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5646891..5647681 5..796 99   Plus

BS07638.complete Sequence

812 bp (812 high quality bases) assembled on 2005-12-21

> BS07638.complete
GAAGTTATCAGTCGACATGGTGGAGGAGATTGGCTGCCAGAGACAGACGG
GCATTGTGGTCGCCATGCCCAGCCAGGTGGCATCCAACACCGGAACTCCA
GCCCCATCCGCCGGCGGCATTCACCAGCAGCATCAGCAGCAGCAACACCA
GCAGCACCAGCAGCAGCAACACCAGCAGCAGCAGCACCAGCAACACCAGC
AGCAACAGCAGCAGCAACACCAACATCAGCAGCAGCAACAGCAACACCTT
CAGCAGCAGCAACACCACCAGCTGCAGCAGCAACAGCAGCAGCAGCAGCA
TCAACAACTCGCCAGCAACATGAGCCTGCTGACCGTCAAAGGCGGCCGTT
ACCTTTGGACCGACCGGGAGCTGTTGATGCACCTCCAGAACTACACTCCC
CTGATCCTTCTCATCGATTTCGTGGAGAAGACCCGAACCAAGCGCTTCTA
TGAGAGCTCCGAGCGCTATGAGATACTCATGCTGGTCTTCATCATGCGCA
AGGGAGCGCCGTTTTGTGAGAACAAGCGCTTTCCAGCGGAGTACTGGGTT
AATCTATCGGTGGGACCAATTGCCGAGGCGTTTGACCGTCTGCAGGCGGC
CATCGATATACCGGATCCCCAGCTGCCGATCCACATGAGCGTTACAGATT
TGACCAGCTGGAAGCAAATGTTCGACCTGGCCATGCTGGATATACGGCGT
TTTGCGTACTACACCGATCCCTTGCAGCTGGCCGATGCGGGCGTCTTTAA
CCGGATCACCTTTGAGCAGCGATTCGGAATGCAGTGGCAGGAGTAAAAGC
TTTCTAGACCAT

BS07638.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15772-RB 780 CG15772-PB 1..780 17..796 3900 100 Plus
CG15772-RA 780 CG15772-PA 1..780 17..796 3900 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15772-RB 1691 CG15772-RB 517..1298 15..796 3910 100 Plus
CG15772-RA 1346 CG15772-RA 178..959 15..796 3910 100 Plus
lin-52-RB 1360 CG15929-RB 1102..1360 796..538 1295 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5752867..5753648 15..796 3910 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:42:51 has no hits.

BS07638.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:58 Download gff for BS07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 1..780 17..796 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:52 Download gff for BS07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 163..944 15..796 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:28 Download gff for BS07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 180..957 17..794 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:59 Download gff for BS07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 163..944 15..796 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:13 Download gff for BS07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG15772-RA 180..957 17..794 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:13 Download gff for BS07638.complete
Subject Subject Range Query Range Percent Splice Strand
X 5752869..5753646 17..794 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:28 Download gff for BS07638.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5646902..5647679 17..794 100   Plus

BS07638.pep Sequence

Translation from 16 to 795

> BS07638.pep
MVEEIGCQRQTGIVVAMPSQVASNTGTPAPSAGGIHQQHQQQQHQQHQQQ
QHQQQQHQQHQQQQQQQHQHQQQQQQHLQQQQHHQLQQQQQQQQHQQLAS
NMSLLTVKGGRYLWTDRELLMHLQNYTPLILLIDFVEKTRTKRFYESSER
YEILMLVFIMRKGAPFCENKRFPAEYWVNLSVGPIAEAFDRLQAAIDIPD
PQLPIHMSVTDLTSWKQMFDLAMLDIRRFAYYTDPLQLADAGVFNRITFE
QRFGMQWQE*

BS07638.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15772-PB 259 CG15772-PB 1..259 1..259 1375 100 Plus
CG15772-PA 259 CG15772-PA 1..259 1..259 1375 100 Plus
Sp1-PB 520 CG1343-PB 404..485 12..95 234 60.5 Plus
Sp1-PD 715 CG1343-PD 599..680 12..95 234 60.5 Plus
Sp1-PE 720 CG1343-PE 604..685 12..95 234 60.5 Plus
Sp1-PB 520 CG1343-PB 368..472 11..97 185 49.5 Plus
Sp1-PD 715 CG1343-PD 563..667 11..97 185 49.5 Plus
Sp1-PB 520 CG1343-PB 442..492 37..84 168 64.7 Plus
Sp1-PD 715 CG1343-PD 637..687 37..84 168 64.7 Plus
Sp1-PB 520 CG1343-PB 444..495 36..84 165 66 Plus
Sp1-PD 715 CG1343-PD 639..690 36..84 165 66 Plus