Clone Sequence Records
BS07638.3prime Sequence
810 bp (809 high quality bases) assembled on 2006-01-06
> BS07638.3prime
ATGGTCTAGAAAGCTTTTACTCCTGCCACTGCATTCCGAATCGCTGCTCA
AAGGTGATCCGGTTAAAGACGCCCGCATCGGCCAGCTGCAAGGGATCGGT
GTAGTACGCAAAACGCCGTATATCCAGCATGGCCAGGTCGAACATTTGCT
TCCAGCTGGTCAAATCTGTAACGCTCATGTGGATCGGCAGCTGGGGATCC
GGTATATCGATGGCCGCCTGCAGACGGTCAAACGCCTCGGCAATTGGTCC
CACCGATAGATTAACCCAGTACTCCGCTGGAAAGCGCTTGTTCTCACAAA
ACGGCGCTCCCTTGCGCATGATGAAGACCAGCATGAGTATCTCATAGCGC
TCGGAGCTCTCATAGAAGCGCTTGGTTCGGGTCTTCTCCACGAAATCGAT
GAGAAGGATCAGGGGAGTGTAGTTCTGGAGGTGCATCAACAGCTCCCGGT
CGGTCCAAAGGTAACGGCCGCCTTTGACGGTCAGCAGGCTCATGTTGCTG
GCGAGTTGTTGATGCTGCTGCTGCTGCTGTTGCTGCTGCAGCTGGTGGTG
TTGCTGCTGCTGAAGGTGTTGCTGTTGCTGCTGCTGATGTTGGTGTTGCT
GCTGCTGTTGCTGCTGGTGTTGCTGGTGCTGCTGCTGCTGGTGTTGCTGC
TGCTGGTGCTGCTGGTGTTGCTGCTGCTGATGCTGCTGGTGAATGCCGCC
GGCGGATGGGGCTGGAGTTCCGGTGTTGGATGCCACCTGGCTGGGCATGG
CGACCACAATGCCCGTCTGTCTCTGGCAGCCAATCTCCTCCACCATGTCG
ACTGATAACT
BS07638.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15772-PA | 780 | CG15772-RA | 1..780 | 796..17 | 3900 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:56:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15772-RB | 1691 | CG15772-RB | 517..1298 | 798..17 | 3910 | 100 | Minus |
CG15772-RA | 1346 | CG15772-RA | 178..959 | 798..17 | 3910 | 100 | Minus |
lin-52-RB | 1360 | CG15929-RB | 1102..1360 | 17..275 | 1295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:56:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 5752867..5753648 | 798..17 | 3910 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:56:09 has no hits.
BS07638.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:51 Download gff for
BS07638.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-PA | 1..780 | 17..796 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:07 Download gff for
BS07638.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-PA | 1..780 | 17..796 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:59:18 Download gff for
BS07638.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 178..959 | 17..798 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:07:10 Download gff for
BS07638.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 178..959 | 17..798 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:07:10 Download gff for
BS07638.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5752857..5753648 | 17..810 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:59:18 Download gff for
BS07638.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 5646890..5647681 | 17..810 | 99 | | Minus |
BS07638.5prime Sequence
810 bp (809 high quality bases) assembled on 2006-01-06
> BS07638.5prime
GAAGTTATCAGTCGACATGGTGGAGGAGATTGGCTGCCAGAGACAGACGG
GCATTGTGGTCGCCATGCCCAGCCAGGTGGCATCCAACACCGGAACTCCA
GCCCCATCCGCCGGCGGCATTCACCAGCAGCATCAGCAGCAGCAACACCA
GCAGCACCAGCAGCAGCAACACCAGCAGCAGCAGCACCAGCAACACCAGC
AGCAACAGCAGCAGCAACACCAACATCAGCAGCAGCAACAGCAACACCTT
CAGCAGCAGCAACACCACCAGCTGCAGCAGCAACAGCAGCAGCAGCAGCA
TCAACAACTCGCCAGCAACATGAGCCTGCTGACCGTCAAAGGCGGCCGTT
ACCTTTGGACCGACCGGGAGCTGTTGATGCACCTCCAGAACTACACTCCC
CTGATCCTTCTCATCGATTTCGTGGAGAAGACCCGAACCAAGCGCTTCTA
TGAGAGCTCCGAGCGCTATGAGATACTCATGCTGGTCTTCATCATGCGCA
AGGGAGCGCCGTTTTGTGAGAACAAGCGCTTTCCAGCGGAGTACTGGGTT
AATCTATCGGTGGGACCAATTGCCGAGGCGTTTGACCGTCTGCAGGCGGC
CATCGATATACCGGATCCCCAGCTGCCGATCCACATGAGCGTTACAGATT
TGACCAGCTGGAAGCAAATGTTCGACCTGGCCATGCTGGATATACGGCGT
TTTGCGTACTACACCGATCCCTTGCAGCTGGCCGATGCGGGCGTCTTTAA
CCGGATCACCTTTGAGCAGCGATTCGGAATGCAGTGGCAGGAGTAAAAGC
TTTCTAGACC
BS07638.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15772-PA | 780 | CG15772-RA | 1..780 | 17..796 | 3900 | 100 | Plus |
CG1343-PB | 1563 | Sp1-RB | 1268..1355 | 120..207 | 190 | 88.6 | Plus |
CG1343-PA | 2076 | Sp1-RA | 1781..1868 | 120..207 | 190 | 88.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 10:30:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15772-RB | 1691 | CG15772-RB | 517..1298 | 15..796 | 3910 | 100 | Plus |
CG15772-RA | 1346 | CG15772-RA | 178..959 | 15..796 | 3910 | 100 | Plus |
lin-52-RB | 1360 | CG15929-RB | 1102..1360 | 796..538 | 1295 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 10:30:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 5752867..5753648 | 15..796 | 3910 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 10:30:38 has no hits.
BS07638.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:52 Download gff for
BS07638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-PA | 1..780 | 17..796 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:08 Download gff for
BS07638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-PA | 1..780 | 17..796 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:30:03 Download gff for
BS07638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 178..959 | 15..796 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:39:44 Download gff for
BS07638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 178..959 | 15..796 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:39:44 Download gff for
BS07638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5752858..5753648 | 5..796 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:30:03 Download gff for
BS07638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 5646891..5647681 | 5..796 | 99 | | Plus |
BS07638.complete Sequence
812 bp (812 high quality bases) assembled on 2005-12-21
> BS07638.complete
GAAGTTATCAGTCGACATGGTGGAGGAGATTGGCTGCCAGAGACAGACGG
GCATTGTGGTCGCCATGCCCAGCCAGGTGGCATCCAACACCGGAACTCCA
GCCCCATCCGCCGGCGGCATTCACCAGCAGCATCAGCAGCAGCAACACCA
GCAGCACCAGCAGCAGCAACACCAGCAGCAGCAGCACCAGCAACACCAGC
AGCAACAGCAGCAGCAACACCAACATCAGCAGCAGCAACAGCAACACCTT
CAGCAGCAGCAACACCACCAGCTGCAGCAGCAACAGCAGCAGCAGCAGCA
TCAACAACTCGCCAGCAACATGAGCCTGCTGACCGTCAAAGGCGGCCGTT
ACCTTTGGACCGACCGGGAGCTGTTGATGCACCTCCAGAACTACACTCCC
CTGATCCTTCTCATCGATTTCGTGGAGAAGACCCGAACCAAGCGCTTCTA
TGAGAGCTCCGAGCGCTATGAGATACTCATGCTGGTCTTCATCATGCGCA
AGGGAGCGCCGTTTTGTGAGAACAAGCGCTTTCCAGCGGAGTACTGGGTT
AATCTATCGGTGGGACCAATTGCCGAGGCGTTTGACCGTCTGCAGGCGGC
CATCGATATACCGGATCCCCAGCTGCCGATCCACATGAGCGTTACAGATT
TGACCAGCTGGAAGCAAATGTTCGACCTGGCCATGCTGGATATACGGCGT
TTTGCGTACTACACCGATCCCTTGCAGCTGGCCGATGCGGGCGTCTTTAA
CCGGATCACCTTTGAGCAGCGATTCGGAATGCAGTGGCAGGAGTAAAAGC
TTTCTAGACCAT
BS07638.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15772-RB | 780 | CG15772-PB | 1..780 | 17..796 | 3900 | 100 | Plus |
CG15772-RA | 780 | CG15772-PA | 1..780 | 17..796 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15772-RB | 1691 | CG15772-RB | 517..1298 | 15..796 | 3910 | 100 | Plus |
CG15772-RA | 1346 | CG15772-RA | 178..959 | 15..796 | 3910 | 100 | Plus |
lin-52-RB | 1360 | CG15929-RB | 1102..1360 | 796..538 | 1295 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 5752867..5753648 | 15..796 | 3910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:42:51 has no hits.
BS07638.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:58 Download gff for
BS07638.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 1..780 | 17..796 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:52 Download gff for
BS07638.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 163..944 | 15..796 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:28 Download gff for
BS07638.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 180..957 | 17..794 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:59 Download gff for
BS07638.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 163..944 | 15..796 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:13 Download gff for
BS07638.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15772-RA | 180..957 | 17..794 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:13 Download gff for
BS07638.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5752869..5753646 | 17..794 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:28 Download gff for
BS07638.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 5646902..5647679 | 17..794 | 100 | | Plus |
BS07638.pep Sequence
Translation from 16 to 795
> BS07638.pep
MVEEIGCQRQTGIVVAMPSQVASNTGTPAPSAGGIHQQHQQQQHQQHQQQ
QHQQQQHQQHQQQQQQQHQHQQQQQQHLQQQQHHQLQQQQQQQQHQQLAS
NMSLLTVKGGRYLWTDRELLMHLQNYTPLILLIDFVEKTRTKRFYESSER
YEILMLVFIMRKGAPFCENKRFPAEYWVNLSVGPIAEAFDRLQAAIDIPD
PQLPIHMSVTDLTSWKQMFDLAMLDIRRFAYYTDPLQLADAGVFNRITFE
QRFGMQWQE*
BS07638.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15772-PB | 259 | CG15772-PB | 1..259 | 1..259 | 1375 | 100 | Plus |
CG15772-PA | 259 | CG15772-PA | 1..259 | 1..259 | 1375 | 100 | Plus |
Sp1-PB | 520 | CG1343-PB | 404..485 | 12..95 | 234 | 60.5 | Plus |
Sp1-PD | 715 | CG1343-PD | 599..680 | 12..95 | 234 | 60.5 | Plus |
Sp1-PE | 720 | CG1343-PE | 604..685 | 12..95 | 234 | 60.5 | Plus |
Sp1-PB | 520 | CG1343-PB | 368..472 | 11..97 | 185 | 49.5 | Plus |
Sp1-PD | 715 | CG1343-PD | 563..667 | 11..97 | 185 | 49.5 | Plus |
Sp1-PB | 520 | CG1343-PB | 442..492 | 37..84 | 168 | 64.7 | Plus |
Sp1-PD | 715 | CG1343-PD | 637..687 | 37..84 | 168 | 64.7 | Plus |
Sp1-PB | 520 | CG1343-PB | 444..495 | 36..84 | 165 | 66 | Plus |
Sp1-PD | 715 | CG1343-PD | 639..690 | 36..84 | 165 | 66 | Plus |