Clone Sequence Records
BS07639.3prime Sequence
864 bp (800 high quality bases) assembled on 2006-01-06
> BS07639.3prime
ATGGTCTAGAAAGCTTTCATCTTATGCCTTTAAACAAACGGAGCACGGAG
TTTGGCTCTTTGGATATTTTCTGTTTGGTAAAAACGGTCCAGAAGCGAAG
CGTCTCATCTGCGCCGCCAGTCACTATGGACTCGTTATCCGGACTCACTG
ACAGGTGGAGTACCCGCTGTGTGTGCCCGGACAGCCTGGCCATCTGCTTC
AGCGAGGGATAGCGCCAGGCAATGACCTGTGGCTGCGCGTGTCCGTGGGT
GGTAACCAGCTCTCGGGAATCCCTGGCCCAGGCCAGGTTGCTGATCTGGG
CGCCGGTGTTGATGCACTTCACCAGCTTCCCGGTGAGGACGTTCCAAAAG
CGCAAGCAGCGATCGGCGGACCCACCGCCACTGGCCAGAAGACCGGACTT
ATGTGGCGACCAGCCCAGCGCCTTGACCACCGCCTTGTGCTCGTCGAAGG
CGTAAATGGGCTCCGGCCAATCGTCGGTCCAAACCAACAGGCGGTTGTCG
CTGCCACCGCTGGCCAAGTATCGATTGCTGGGCGACCACTGTAGGCCACA
CACCTCTAGCTTGTGTCCGCGCAAGCAGCGGGTTATGTGCGTCGGCGGAT
TGCGGATATCCCGCTGCAAAATTGAGCGGTCGCGGGAGCCACTGGCCAAT
CGGTTGCCGCACCAAGCTAGCGCCGTTACACGCGCCGAGTGCTCTTCCAG
TCGGTTTATCTGCTTTTGGTTCTCGGCATCCCAAATGGTCACGTACCCGG
ACTGGGTGCCAATGGCCACCTGCCGGCCTTCACCGTGCCAGCTAACTGCT
GTAATCAGGTTATCCTCATTGTTGAAGTCGCATAGTCGCGTCACCTGACC
ACTGACGGCACTCC
BS07639.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16783-PA | 1356 | fzr2-RA | 509..1356 | 864..17 | 4240 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 16:10:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1450 | CG16783-RA | 548..1395 | 864..17 | 4240 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 16:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23951194..23952041 | 864..17 | 4240 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 16:10:41 has no hits.
BS07639.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:53 Download gff for
BS07639.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-PA | 509..1356 | 17..864 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:10 Download gff for
BS07639.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16783-PA | 509..1356 | 17..864 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:21:21 Download gff for
BS07639.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 548..1395 | 17..864 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:40:29 Download gff for
BS07639.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 548..1395 | 17..864 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:40:29 Download gff for
BS07639.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23951194..23952041 | 17..864 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:21:21 Download gff for
BS07639.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19838717..19839564 | 17..864 | 100 | | Minus |
BS07639.5prime Sequence
891 bp (774 high quality bases) assembled on 2006-01-06
> BS07639.5prime
GAAGTTATCAGTCGACATGTTTCAATCAGAGTATCAGCAACGATTGCTTC
CGGGCGTCGCCGTCGGCAAAAAGGAGGACATCGATCTGCGCTGCATTCCC
ACACGAGCTGGTAACCACTGGAACCGGAACTTTGTCAATGCTCCGGGAGA
CTCCAATGTGTACGAGAGCTCTGTGTACTCATGCCTCTTGCGCAACGAGT
TCCTGGACGAGAACATCACTTCCTTGGAGAACTGCGAGCAGACCGCACAG
GTCCATGCCCAGACTGATGATTTTAGGGATCGGCATAACCGTATCTTTGG
TTTTGCCAGCGGTTCTTCGTCGCCAGTACGCACACCATTCGCCAACATCA
GCGAGAGCAGCCAGCGGCTGCTCAGCATCTTCAAGAGACCCATGCGCCGA
CTGCCACGTCGCCCGTACAAGATACTCGATGCGCCGGAGCTGCAAGACGA
CTTCTACCTGAACCTTATTGACTGGTCGTCGAAAAACACCCTGGCCGTTG
GTCTCGGGTGCTCGGTTTATCTCTGGAGTGCCGTCAGTGGTCAGGTGACG
CGACTATGCGACTTCAACAATGAGGATAACCTGATTACAGCAGTTAGCTG
GCACGGTGAAGGCCGGCAGGTGGCCATTGGCACCCAGTCCGGGTACGTGA
CCATTTGGGATGCCGAGAACCAAAAGCAGATAAACCGACTGGAAGAGCAC
TCGGCGCGTGTAACGGCGCTAGCTTGGTGCGGCAACCGATTGGCCAGTGG
CTCCCGCGACCGCTCAATTTTGCAGCGGGATATCCGCAATCCGCCGACGC
ACATAACCCGCTGCTTGCGCGGACACAAGCTAGAGGTGTGTGGCCTACAG
TGGTCGCCCAGCAATCGATACTTGGCCAGCGGTGGCAGCGA
BS07639.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:51:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16783-PA | 1356 | fzr2-RA | 1..875 | 17..891 | 4375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:02:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1450 | CG16783-RA | 40..914 | 17..891 | 4375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:02:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23950686..23951560 | 17..891 | 4375 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:02:28 has no hits.
BS07639.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:18:54 Download gff for
BS07639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-PA | 1..874 | 17..890 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:11 Download gff for
BS07639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16783-PA | 1..874 | 17..890 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:00:39 Download gff for
BS07639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 37..913 | 14..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:44:04 Download gff for
BS07639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 37..913 | 14..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:44:04 Download gff for
BS07639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23950683..23951559 | 14..890 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:00:39 Download gff for
BS07639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19838206..19839082 | 14..890 | 99 | | Plus |
BS07639.complete Sequence
1388 bp (1388 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635930
> BS07639.complete
GAAGTTATCAGTCGACATGTTTCAATCAGAGTATCAGCAACGATTGCTTC
CGGGCGTCGCCGTCGGCAAAAAGGAGGACATCGATCTGCGCTGCATTCCC
ACACGAGCTGGTAACCACTGGAACCGGAACTTTGTCAATGCTCCGGGAGA
CTCCAATGTGTACGAGAGCTCTGTGTACTCATGCCTCTTGCGCAACGAGT
TCCTGGACGAGAACATCACTTCCTTGGAGAACTGCGAGCAGACCGCACAG
GTCCATGCCCAGACTGATGATTTTAGGGATCGGCATAACCGTATCTTTGG
TTTTGCCAGCGGTTCTTCGTCGCCAGTACGCACACCATTCGCCAACATCA
GCGAGAGCAGCCAGCGGCTGCTCAGCATCTTCAAGAGACCCATGCGCCGA
CTGCCACGTCGCCCGTACAAGATACTCGATGCGCCGGAGCTGCAAGACGA
CTTCTACCTGAACCTTATTGACTGGTCGTCGAAAAACACCCTGGCCGTTG
GTCTCGGGTGCTCGGTTTATCTCTGGAGTGCCGTCAGTGGTCAGGTGACG
CGACTATGCGACTTCAACAATGAGGATAACCTGATTACAGCAGTTAGCTG
GCACGGTGAAGGCCGGCAGGTGGCCATTGGCACCCAGTCCGGGTACGTGA
CCATTTGGGATGCCGAGAACCAAAAGCAGATAAACCGACTGGAAGAGCAC
TCGGCGCGTGTAACGGCGCTAGCTTGGTGCGGCAACCGATTGGCCAGTGG
CTCCCGCGACCGCTCAATTTTGCAGCGGGATATCCGCAATCCGCCGACGC
ACATAACCCGCTGCTTGCGCGGACACAAGCTAGAGGTGTGTGGCCTACAG
TGGTCGCCCAGCAATCGATACTTGGCCAGCGGTGGCAGCGACAACCGCCT
GTTGGTTTGGACCGACGATTGGCCGGAGCCCATTTACGCCTTCGACGAGC
ACAAGGCGGTGGTCAAGGCGCTGGGCTGGTCGCCACATAAGTCCGGTCTT
CTGGCCAGTGGCGGTGGGTCCGCCGATCGCTGCTTGCGCTTTTGGAACGT
CCTCACCGGGAAGCTGGTGAAGTGCATCAACACCGGCGCCCAGATCAGCA
ACCTGGCCTGGGCCAGGGATTCCCGAGAGCTGGTTACCACCCACGGACAC
GCGCAGCCACAGGTCATTGCCTGGCGCTATCCCTCGCTGAAGCAGATGGC
CAGGCTGTCCGGGCACACACAGCGGGTACTCCACCTGTCAGTGAGTCCGG
ATAACGAGTCCATAGTGACTGGCGGCGCAGATGAGACGCTTCGCTTCTGG
ACCGTTTTTACCAAACAGAAAATATCCAAAGAGCCAAACTCCGTGCTCCG
TTTGTTTAAAGGCATAAGATGAAAGCTTTCTAGACCAT
BS07639.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:06:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1356 | CG16783-PA | 1..1356 | 17..1372 | 6780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1450 | CG16783-RA | 40..1395 | 17..1372 | 6780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23950686..23952041 | 17..1372 | 6780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:06:48 has no hits.
BS07639.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:00 Download gff for
BS07639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 1..1356 | 17..1372 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:53 Download gff for
BS07639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 178..1536 | 14..1372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:35 Download gff for
BS07639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 46..1394 | 23..1371 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:00 Download gff for
BS07639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 178..1536 | 14..1372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:14 Download gff for
BS07639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 46..1394 | 23..1371 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:14 Download gff for
BS07639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23950692..23952040 | 23..1371 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:35 Download gff for
BS07639.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19838215..19839563 | 23..1371 | 100 | | Plus |
BS07639.pep Sequence
Translation from 16 to 1371
> BS07639.pep
MFQSEYQQRLLPGVAVGKKEDIDLRCIPTRAGNHWNRNFVNAPGDSNVYE
SSVYSCLLRNEFLDENITSLENCEQTAQVHAQTDDFRDRHNRIFGFASGS
SSPVRTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYLNL
IDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGR
QVAIGTQSGYVTIWDAENQKQINRLEEHSARVTALAWCGNRLASGSRDRS
ILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLVWTD
DWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNVLTGKL
VKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGH
TQRVLHLSVSPDNESIVTGGADETLRFWTVFTKQKISKEPNSVLRLFKGI
R*
BS07639.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:29:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-PA | 451 | CG16783-PA | 1..451 | 1..451 | 2406 | 100 | Plus |
| rap-PA | 478 | CG3000-PA | 1..478 | 1..451 | 1184 | 49.2 | Plus |
| rap-PB | 478 | CG3000-PB | 1..478 | 1..451 | 1184 | 49.2 | Plus |
| fzy-PA | 526 | CG4274-PA | 188..508 | 123..439 | 733 | 42.4 | Plus |
| ago-PA | 1326 | CG15010-PA | 927..1267 | 64..432 | 199 | 23.3 | Plus |
