Clone BS07649 Report

Search the DGRC for BS07649

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:76
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG13698-RB
Protein status:BS07649.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07649.3prime Sequence

865 bp (836 high quality bases) assembled on 2006-01-06

> BS07649.3prime
ATGGTCTAGAAAGCTTTTACACCTCGGTGCTGTGCGTCTGAATTCGGACC
TTCTTCACGCTTCCATTGCGCCGCATAGGTGGCGAGCTTCCGGATCCAGA
ATAGCCGGGATTTTGAATGCCTAACGTTGGATCCGGCCGTGGTCTCGGCT
TCTTCAGACTCGATCGCAGCGGTGAACGAGTCACCGAGTCAAGGGTGGAT
CCATTGGACACGCTGGTCACGGTGGTGCTCATGGAGGCCACGCTGCCCGC
CGTTCCCGCTCCATTCCGGATTCCGCTGTAGGGCTTACCGGATGCGTCCG
TCACCGAAACGCCGTTGCGACTGCGAGGCTCCTTGAAACCAGGATTATTG
AACGTAGTGGCACTGCCCGGAGATGACACATCCAGCGCCATTGTGGGATC
TCCGCCTGGACTGCGCGAGTAGATCACATCGTACAGGGCGGCCACGAACA
GAGCAATTGTCAAAACAATAGCCACAATCTGTATATAGAAGGAAATGCCC
CGCGATATCTTGAAGCCATAGCGCTCCTGCTCATCAATTTGCAGAGCAAA
CAAAACCGTCGCTATGATGGCCAGTACACCTCCCAGCAATGCCAACATTA
ACTTCACTATCACTAGAGTTGTGTAGGGCATAACCACCTTCTCCCTGGAT
GAGATCATCGCGTGTTGAATGACCGACAGAATGCAGAAGATGCCCAGCAC
AGCTGAGCTGCCAATGGCCAAGAGTCCACTGACAAAAACCGCATTACTTA
ATCTAAACTTGGACACGTCGTTGCCGCATTTCTCGCGATTATAAGTCAAT
TGCTTGCAGACCTTAAACGGTCCGAAATAACCTCGATCGAAGTCATAGCC
GCCCGATGGACTATC

BS07649.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13698-PB 951 CG13698-RB 103..951 865..17 4245 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG13698-RC 1617 CG13698-RC 720..1568 865..17 4245 100 Minus
CG13698-RB 2418 CG13698-RB 806..1654 865..17 4245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 15:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18089181..18089646 17..482 2330 100 Plus
3L 28110227 3L 18090009..18090176 577..744 840 100 Plus
3L 28110227 3L 18090279..18090387 745..853 545 100 Plus
3L 28110227 3L 18089846..18089948 479..581 515 100 Plus
Blast to na_te.dros performed on 2015-02-08 15:03:46 has no hits.

BS07649.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:19:15 Download gff for BS07649.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-PB 103..951 17..865 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:41 Download gff for BS07649.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-PB 103..951 17..865 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 00:02:01 Download gff for BS07649.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 806..1668 2..865 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:41:20 Download gff for BS07649.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 806..1668 2..865 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:41:20 Download gff for BS07649.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 18089167..18089642 2..478 98 <- Plus
3L 18089846..18089946 479..579 100 <- Plus
3L 18090012..18090176 580..744 100 <- Plus
3L 18090279..18090386 745..852 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 00:02:01 Download gff for BS07649.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18082267..18082742 2..478 98 <- Plus
arm_3L 18082946..18083046 479..579 100 <- Plus
arm_3L 18083112..18083276 580..744 100 <- Plus
arm_3L 18083379..18083486 745..852 100 <- Plus

BS07649.5prime Sequence

834 bp (829 high quality bases) assembled on 2006-01-06

> BS07649.5prime
GAAGTTATCAGTCGACATGGCAAAGTCGACACTTTATGCTGCTGGGGTGA
CCTGTCTGGGCTTTATTTGCTTCGCCTTGGCATCTGTGGCCATTGGCATA
CCCATTTGGGGTTACTACGATAGTCCATCGGGCGGCTATGACTTCGATCG
AGGTTATTTCGGACCGTTTAAGGTCTGCAAGCAATTGACTTATAATCGCG
AGAAATGCGGCAACGACGTGTCCAAGTTTAGATTAAGTAATGCGGTTTTT
GTCAGTGGACTCTTGGCCATTGGCAGCTCAGCTGTGCTGGGCATCTTCTG
CATTCTGTCGGTCATTCAACACGCGATGATCTCATCCAGGGAGAAGGTGG
TTATGCCCTACACAACTCTAGTGATAGTGAAGTTAATGTTGGCATTGCTG
GGAGGTGTACTGGCCATCATAGCGACGGTTTTGTTTGCTCTGCAAATTGA
TGAGCAGGAGCGCTATGGCTTCAAGATATCGCGGGGCATTTCCTTCTATA
TACAGATTGTGGCTATTGTTTTGACAATTGCTCTGTTCGTGGCCGCCCTG
TACGATGTGATCTACTCGCGCAGTCCAGGCGGAGATCCCACAATGGCGCT
GGATGTGTCATCTCCGGGCAGTGCCACTACGTTCAATAATCCTGGTTTCA
AGGAGCCTCGCAGTCGCAACGGCGTTTCGGTGACGGACGCATCCGGTAAG
CCCTACAGCGGAATCCGGAATGGAGCGGGAACGGCGGGCAGCGTGGCCTC
CATGAGCACCACCGTGACCAGCGTGTCCAATGGATCCACCCTTGACTCGG
TGACTCGTTCACCGCTGCGATCGAGTCTGAAGAA

BS07649.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13698-PB 951 CG13698-RB 1..818 17..834 4090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 03:52:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13698-RC 1617 CG13698-RC 616..1435 15..834 4100 100 Plus
CG13698-RB 2418 CG13698-RB 702..1521 15..834 4100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 03:52:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18089314..18089646 834..502 1665 100 Minus
3L 28110227 3L 18090009..18090176 407..240 840 100 Minus
3L 28110227 3L 18090447..18090564 132..15 590 100 Minus
3L 28110227 3L 18090279..18090387 239..131 545 100 Minus
3L 28110227 3L 18089846..18089948 505..403 515 100 Minus
Blast to na_te.dros performed on 2015-02-10 03:52:43 has no hits.

BS07649.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:19:16 Download gff for BS07649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-PB 1..816 17..832 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:42 Download gff for BS07649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-PB 1..816 17..832 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:46:17 Download gff for BS07649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 693..1521 6..834 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:20:05 Download gff for BS07649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 693..1521 6..834 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:20:05 Download gff for BS07649.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18089314..18089642 506..834 100 <- Minus
3L 18089846..18089946 405..505 100 <- Minus
3L 18090012..18090176 240..404 100 <- Minus
3L 18090279..18090386 132..239 100 <- Minus
3L 18090448..18090573 6..131 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:46:17 Download gff for BS07649.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18083379..18083486 132..239 100 <- Minus
arm_3L 18083548..18083673 6..131 96   Minus
arm_3L 18082414..18082742 506..834 100 <- Minus
arm_3L 18082946..18083046 405..505 100 <- Minus
arm_3L 18083112..18083276 240..404 100 <- Minus

BS07649.complete Sequence

983 bp (983 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635934

> BS07649.complete
GAAGTTATCAGTCGACATGGCAAAGTCGACACTTTATGCTGCTGGGGTGA
CCTGTCTGGGCTTTATTTGCTTCGCCTTGGCATCTGTGGCCATTGGCATA
CCCATTTGGGGTTACTACGATAGTCCATCGGGCGGCTATGACTTCGATCG
AGGTTATTTCGGACCGTTTAAGGTCTGCAAGCAATTGACTTATAATCGCG
AGAAATGCGGCAACGACGTGTCCAAGTTTAGATTAAGTAATGCGGTTTTT
GTCAGTGGACTCTTGGCCATTGGCAGCTCAGCTGTGCTGGGCATCTTCTG
CATTCTGTCGGTCATTCAACACGCGATGATCTCATCCAGGGAGAAGGTGG
TTATGCCCTACACAACTCTAGTGATAGTGAAGTTAATGTTGGCATTGCTG
GGAGGTGTACTGGCCATCATAGCGACGGTTTTGTTTGCTCTGCAAATTGA
TGAGCAGGAGCGCTATGGCTTCAAGATATCGCGGGGCATTTCCTTCTATA
TACAGATTGTGGCTATTGTTTTGACAATTGCTCTGTTCGTGGCCGCCCTG
TACGATGTGATCTACTCGCGCAGTCCAGGCGGAGATCCCACAATGGCGCT
GGATGTGTCATCTCCGGGCAGTGCCACTACGTTCAATAATCCTGGTTTCA
AGGAGCCTCGCAGTCGCAACGGCGTTTCGGTGACGGACGCATCCGGTAAG
CCCTACAGCGGAATCCGGAATGGAGCGGGAACGGCGGGCAGCGTGGCCTC
CATGAGCACCACCGTGACCAGCGTGTCCAATGGATCCACCCTTGACTCGG
TGACTCGTTCACCGCTGCGATCGAGTCTGAAGAAGCCGAGACCACGGCCG
GATCCAACGTTAGGCATTCAAAATCCCGGCTATTCTGGATCCGGAAGCTC
GCCACCTATGCGGCGCAATGGAAGCGTGAAGAAGGTCCGAATTCAGACGC
ACAGCACCGAGGTGTAAAAGCTTTCTAGACCAT

BS07649.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:46:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG13698-RC 951 CG13698-PC 1..951 17..967 4755 100 Plus
CG13698-RB 951 CG13698-PB 1..951 17..967 4755 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:46:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG13698-RC 1617 CG13698-RC 616..1568 15..967 4765 100 Plus
CG13698-RB 2418 CG13698-RB 702..1654 15..967 4765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:46:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18089181..18089646 967..502 2330 100 Minus
3L 28110227 3L 18090009..18090176 407..240 840 100 Minus
3L 28110227 3L 18090447..18090564 132..15 590 100 Minus
3L 28110227 3L 18090279..18090387 239..131 545 100 Minus
3L 28110227 3L 18089846..18089948 505..403 515 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:46:38 has no hits.

BS07649.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:23 Download gff for BS07649.complete
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 1..951 17..967 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:53:23 Download gff for BS07649.complete
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 674..1649 6..982 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:10 Download gff for BS07649.complete
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 704..1652 17..965 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:23 Download gff for BS07649.complete
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 674..1649 6..982 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:26:40 Download gff for BS07649.complete
Subject Subject Range Query Range Percent Splice Strand
CG13698-RB 704..1652 17..965 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:26:40 Download gff for BS07649.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18090279..18090386 132..239 100 <- Minus
3L 18090448..18090562 17..131 100   Minus
3L 18089183..18089642 506..965 100 <- Minus
3L 18089846..18089946 405..505 100 <- Minus
3L 18090012..18090176 240..404 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:10 Download gff for BS07649.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18082283..18082742 506..965 100 <- Minus
arm_3L 18082946..18083046 405..505 100 <- Minus
arm_3L 18083112..18083276 240..404 100 <- Minus
arm_3L 18083379..18083486 132..239 100 <- Minus
arm_3L 18083548..18083662 17..131 100   Minus

BS07649.pep Sequence

Translation from 16 to 966

> BS07649.pep
MAKSTLYAAGVTCLGFICFALASVAIGIPIWGYYDSPSGGYDFDRGYFGP
FKVCKQLTYNREKCGNDVSKFRLSNAVFVSGLLAIGSSAVLGIFCILSVI
QHAMISSREKVVMPYTTLVIVKLMLALLGGVLAIIATVLFALQIDEQERY
GFKISRGISFYIQIVAIVLTIALFVAALYDVIYSRSPGGDPTMALDVSSP
GSATTFNNPGFKEPRSRNGVSVTDASGKPYSGIRNGAGTAGSVASMSTTV
TSVSNGSTLDSVTRSPLRSSLKKPRPRPDPTLGIQNPGYSGSGSSPPMRR
NGSVKKVRIQTHSTEV*

BS07649.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:26:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13698-PC 316 CG13698-PC 1..316 1..316 1602 100 Plus
CG13698-PB 316 CG13698-PB 1..316 1..316 1602 100 Plus