Clone Sequence Records
BS07654.3prime Sequence
687 bp (686 high quality bases) assembled on 2006-01-06
> BS07654.3prime
ATGGTCTAGAAAGCTTTTATGTCTGCACGGGCACATTGCTATCGGCCTCC
TGCAGAACGGGCGCTGTCCAGACGCCGCTTCCGCTGCGCGTCTTCCGCTG
CTGGACGATGCCATCCATGATGTCCAGCTGCAAGTTGTGCACGCTGCCGC
GGTGATCGGTTAATGGCGGTCCGGCGATGACGCTGCCACGGCGACTGCCA
CTGAAGGATACACCGGAAATGGACTCGCGGCGATTGCGTCCGAAAAGCGT
TGGCGGCACCGCCGATATGGTGACCACCGAGTGCCTACGTCCACCGGCCG
TCGGATTGGCCTTCTGCGAGAGCGTGGCCAGAAACTCGACCTCCTTGGGA
CTGAGCCCGCCAGTCTCGCCGCCCACCTCCGACAATCGACGCACCTGACT
GGCGGTGATGCCCTCGGTAATTTGAAGCGATGGCAGCGAATGCTTGCGTC
GCTGTTGCATATCGGGAAATGGGCAAAGCAGATAGGGATTCACCGGCGAG
TCCGGTTCGGAGTCATCGCTGTTGGAACGGCGTGTCCCGGCCGCAGTGGG
ATCACATCCACCGGCGGCACCCTCCAAGTCATCACCATCCTCGGCGGTGT
GCGATTCCTCCACCACGATCAGCGGCTCCTGGGTGCTCAAGTTGAAGACG
GGCGTGAACGAGGAGCGACGCATGTCGACTGATAACT
BS07654.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32700-PA | 657 | CG32700-RA | 1..657 | 673..17 | 3285 | 100 | Minus |
CG32700-PB | 657 | CG32700-RB | 1..657 | 673..17 | 3285 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:52:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32700-RB | 4208 | CG32700-RB | 442..1098 | 673..17 | 3285 | 100 | Minus |
CG32700-RA | 1441 | CG32700-RA | 438..1094 | 673..17 | 3285 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:51:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9510160..9510632 | 201..673 | 2365 | 100 | Plus |
X | 23542271 | X | 9507079..9507265 | 17..203 | 935 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:52:00 has no hits.
BS07654.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:19:28 Download gff for
BS07654.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-PA | 1..657 | 17..673 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:54 Download gff for
BS07654.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-PB | 1..657 | 17..673 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:08:06 Download gff for
BS07654.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RA | 430..1100 | 12..681 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:31:05 Download gff for
BS07654.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RA | 430..1100 | 12..681 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:31:05 Download gff for
BS07654.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9507073..9507262 | 12..200 | 98 | <- | Plus |
X | 9510160..9510640 | 201..681 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:08:06 Download gff for
BS07654.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9401106..9401295 | 12..200 | 98 | <- | Plus |
arm_X | 9404193..9404673 | 201..681 | 99 | | Plus |
BS07654.5prime Sequence
687 bp (686 high quality bases) assembled on 2006-01-06
> BS07654.5prime
GAAGTTATCAGTCGACATGCGTCGCTCCTCGTTCACGCCCGTCTTCAACT
TGAGCACCCAGGAGCCGCTGATCGTGGTGGAGGAATCGCACACCGCCGAG
GATGGTGATGACTTGGAGGGTGCCGCCGGTGGATGTGATCCCACTGCGGC
CGGGACACGCCGTTCCAACAGCGATGACTCCGAACCGGACTCGCCGGTGA
ATCCCTATCTGCTTTGCCCATTTCCCGATATGCAACAGCGACGCAAGCAT
TCGCTGCCATCGCTTCAAATTACCGAGGGCATCACCGCCAGTCAGGTGCG
TCGATTGTCGGAGGTGGGCGGCGAGACTGGCGGGCTCAGTCCCAAGGAGG
TCGAGTTTCTGGCCACGCTCTCGCAGAAGGCCAATCCGACGGCCGGTGGA
CGTAGGCACTCGGTGGTCACCATATCGGCGGTGCCGCCAACGCTTTTCGG
ACGCAATCGCCGCGAGTCCATTTCCGGTGTATCCTTCAGTGGCAGTCGCC
GTGGCAGCGTCATCGCCGGACCGCCATTAACCGATCACCGCGGCAGCGTG
CACAACTTGCAGCTGGACATCATGGATGGCATCGTCCAGCAGCGGAAGAC
GCGCAGCGGAAGCGGCGTCTGGACAGCGCCCGTTCTGCAGGAGGCCGATA
GCAATGTGCCCGTGCAGACATAAAAGCTTTCTAGACC
BS07654.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32700-PA | 657 | CG32700-RA | 1..657 | 17..673 | 3285 | 100 | Plus |
CG32700-PB | 657 | CG32700-RB | 1..657 | 17..673 | 3285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:06:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32700-RB | 4208 | CG32700-RB | 442..1098 | 17..673 | 3285 | 100 | Plus |
CG32700-RA | 1441 | CG32700-RA | 438..1094 | 17..673 | 3285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:06:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9510160..9510632 | 489..17 | 2365 | 100 | Minus |
X | 23542271 | X | 9507079..9507265 | 673..487 | 935 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:06:43 has no hits.
BS07654.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:19:29 Download gff for
BS07654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-PA | 1..657 | 17..673 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:11:56 Download gff for
BS07654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-PB | 1..657 | 17..673 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:54:41 Download gff for
BS07654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RA | 430..1100 | 9..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:56:07 Download gff for
BS07654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RA | 430..1100 | 9..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:56:07 Download gff for
BS07654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9507073..9507262 | 490..678 | 98 | <- | Minus |
X | 9510160..9510640 | 9..489 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:54:41 Download gff for
BS07654.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9401106..9401295 | 490..678 | 98 | <- | Minus |
arm_X | 9404193..9404673 | 9..489 | 99 | | Minus |
BS07654.complete Sequence
689 bp (689 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635937
> BS07654.complete
GAAGTTATCAGTCGACATGCGTCGCTCCTCGTTCACGCCCGTCTTCAACT
TGAGCACCCAGGAGCCGCTGATCGTGGTGGAGGAATCGCACACCGCCGAG
GATGGTGATGACTTGGAGGGTGCCGCCGGTGGATGTGATCCCACTGCGGC
CGGGACACGCCGTTCCAACAGCGATGACTCCGAACCGGACTCGCCGGTGA
ATCCCTATCTGCTTTGCCCATTTCCCGATATGCAACAGCGACGCAAGCAT
TCGCTGCCATCGCTTCAAATTACCGAGGGCATCACCGCCAGTCAGGTGCG
TCGATTGTCGGAGGTGGGCGGCGAGACTGGCGGGCTCAGTCCCAAGGAGG
TCGAGTTTCTGGCCACGCTCTCGCAGAAGGCCAATCCGACGGCCGGTGGA
CGTAGGCACTCGGTGGTCACCATATCGGCGGTGCCGCCAACGCTTTTCGG
ACGCAATCGCCGCGAGTCCATTTCCGGTGTATCCTTCAGTGGCAGTCGCC
GTGGCAGCGTCATCGCCGGACCGCCATTAACCGATCACCGCGGCAGCGTG
CACAACTTGCAGCTGGACATCATGGATGGCATCGTCCAGCAGCGGAAGAC
GCGCAGCGGAAGCGGCGTCTGGACAGCGCCCGTTCTGCAGGAGGCCGATA
GCAATGTGCCCGTGCAGACATAAAAGCTTTCTAGACCAT
BS07654.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:18:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32700-RB | 657 | CG32700-PB | 1..657 | 17..673 | 3285 | 100 | Plus |
CG32700-RA | 657 | CG32700-PA | 1..657 | 17..673 | 3285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:18:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32700-RB | 4208 | CG32700-RB | 442..1098 | 17..673 | 3285 | 100 | Plus |
CG32700-RA | 1441 | CG32700-RA | 438..1094 | 17..673 | 3285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:18:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9510160..9510632 | 489..17 | 2365 | 100 | Minus |
X | 23542271 | X | 9507079..9507265 | 673..487 | 935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:18:56 has no hits.
BS07654.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:07:03 Download gff for
BS07654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RB | 1..657 | 17..673 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:57 Download gff for
BS07654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RB | 825..1495 | 9..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:39:40 Download gff for
BS07654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RA | 438..1092 | 17..671 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:07:04 Download gff for
BS07654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RB | 825..1495 | 9..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:26 Download gff for
BS07654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32700-RA | 438..1092 | 17..671 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:26 Download gff for
BS07654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9507081..9507262 | 490..671 | 100 | <- | Minus |
X | 9510160..9510632 | 17..489 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:39:40 Download gff for
BS07654.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9401114..9401295 | 490..671 | 100 | <- | Minus |
arm_X | 9404193..9404665 | 17..489 | 100 | | Minus |
BS07654.pep Sequence
Translation from 16 to 672
> BS07654.pep
MRRSSFTPVFNLSTQEPLIVVEESHTAEDGDDLEGAAGGCDPTAAGTRRS
NSDDSEPDSPVNPYLLCPFPDMQQRRKHSLPSLQITEGITASQVRRLSEV
GGETGGLSPKEVEFLATLSQKANPTAGGRRHSVVTISAVPPTLFGRNRRE
SISGVSFSGSRRGSVIAGPPLTDHRGSVHNLQLDIMDGIVQQRKTRSGSG
VWTAPVLQEADSNVPVQT*
BS07654.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:29:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32700-PB | 218 | CG32700-PB | 1..218 | 1..218 | 1120 | 100 | Plus |
CG32700-PA | 218 | CG32700-PA | 1..218 | 1..218 | 1120 | 100 | Plus |
CG6123-PB | 614 | CG6123-PB | 44..247 | 12..215 | 458 | 53.7 | Plus |
CG6123-PA | 614 | CG6123-PA | 44..247 | 12..215 | 458 | 53.7 | Plus |