Clone Sequence Records
BS07669.3prime Sequence
938 bp (731 high quality bases) assembled on 2006-01-06
> BS07669.3prime
ATGGTCTAGAAAGCTTTCAGGGAAACGTATTTGATCCACGCATGGGAGGT
GGACCATCAACAGTCTCCTCGATGAGCAGCGGCGAGCTCCAGCGCATTAG
GAAGTAGGCAGATCCGGATTTATCGTTTGTCCCGGACAACCGATTTCCAC
CAAAGGGAGTCAGCCCGTACGTGCTACCCGTGCATCGCTCATTCACGTAG
AGATTACTAGCGGACATTCGCAGTTGGTTCAGGCAGTGAAGGATAACCTC
ATCCTGACTTGCGAATATGGAGCCGGAGAGCGCGTATCTGGACTGATTGG
CGGCAAGCTTGAGAGCCTCACTGAAGGAATCGTCCGAATAGACGAACACC
GGCAAGAACGGTCCGCAGCAGGGCTCACACAGCAGTGGATCCAATGGATC
CGACACCCGGACAATCGTTGGATCAACGAATCTACCAGTGCTGTCATCAC
AGCTGCCTCCGCACAACTGCTCCATGTTCTTGGTGCGCTGCAGTAGTTTC
TGCATCCGCCGGAAGTCATTTATATGCACCATCGCTCCTATATCCGTTTC
CGATTCGATGGGGTCTCCGATGGTCAGTTGCTCCGTGGCCTCCACCAACT
CCTCCCTGAGGCGTGGCCACATTGACGAGGGCACATACATCCGGGAGAGC
GAGTTGGCATACTGTCCGGCAAAGCCAAAGGCCGCCTGCACGGTGGCTGA
GACGACAGATTCCACCTTAGCGCTGGCATGGACAAAATGAAAGTTCTGAC
CCGGGCACTCGGCCACCAGACGAGGAAAACAGATGTATCGCTCCATTCGA
TCGCTCACCAGCTTGTGCACATGCCTGTAAAAAGCTGCACTCGCTTGAGT
ATTCAGTCCGGCAAAGTGCACGGCATCCGTGATGGTGTCCAAGAACAGAC
GCTCGTTGGCCGGCACAAAGTTGATAACGCCGCTGGGC
BS07669.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-PA | 1746 | CG6661-RA | 825..1746 | 938..17 | 4610 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:41:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-RA | 1976 | CG6661-RA | 974..1895 | 938..17 | 4610 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:41:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14035749..14036670 | 938..17 | 4610 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 11:41:40 has no hits.
BS07669.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:19:54 Download gff for
BS07669.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-PA | 825..1746 | 17..938 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:12:29 Download gff for
BS07669.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-PA | 825..1746 | 17..938 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:37:34 Download gff for
BS07669.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 974..1904 | 5..938 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:46:42 Download gff for
BS07669.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 974..1904 | 5..938 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:46:42 Download gff for
BS07669.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14035749..14036679 | 5..938 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:37:34 Download gff for
BS07669.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14028849..14029779 | 5..938 | 99 | | Minus |
BS07669.5prime Sequence
864 bp (863 high quality bases) assembled on 2006-01-06
> BS07669.5prime
GAAGTTATCAGTCGACATGCTTAAGCTGGGACTCGCGGTCCCCACTCGAT
GGTCCTTCAGATGTCGTCGCCTTGGTGGAATGGCTATCATTAAAGGCGAG
ACAAAAATCTCCGTGGACAAGCAGAAAGCAGTCCAGCCGGAACAGGATGA
GGACCAACAAGAGGTCGAGCCGGATTCCCAGCCGGCGGAAGAAAATCCAA
GTATTCACAGGAACCAGAGAGTATTAGTTAATCATGCCATTCAGGAGATT
CAGCACAGGCCGTTGGAGGTGCCCACAATTATCGGCGATGATACAGTGTA
CACCATGGACACTCAGCGTGTTTGCTGCCCGCATCACCTGCAGACGAACT
TGGCTCACGTCTACTACGCCAATCGCAAGCAAATCGAGGCGGCAATTAAG
TCTGCTCTTTCGGCGCAAGGAACTTGGAGTCTAGTTCCCATCGCCCAGCG
ACTGGCCATTTGGCGACGTGCCGCCACCATTATCGAGGAGGACGAGCTGC
GGCTGAGAGTGTTCCTCATGATGACGCTGAGCAAAACCGCCGACGATGCG
ACGCGGGACATTCGGCGGCTACTCACATCGCTGAGGGCCAATGCTGACTA
TTTGGAGCATCTGTCCGAGCTGCGCTTTGAGATCCAGGGTGATATGAATG
TATTCCCCAGCTTTCATTTGCGACCCATGGATGGATTTGTGGCCGCACTG
GCACCATTTGAATCGGTGGCCTTGTCATCCAGCTTGGCCCTCTGTCCGGC
GCTCATGGGCAACACGGTGTTGTGGAATCCCTCATTGGAAGTGGCACCAG
TGAGCTATTTAATTTTCAGAGCCTTCCAGGAGGCGGGTTTGCCCAGCGGC
GTTATCAACTTTGT
BS07669.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-PA | 1746 | CG6661-RA | 1..848 | 17..864 | 4240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-RA | 1976 | CG6661-RA | 150..997 | 17..864 | 4240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:12:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14034925..14035772 | 17..864 | 4240 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 13:12:25 has no hits.
BS07669.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:19:55 Download gff for
BS07669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-PA | 1..848 | 17..864 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:12:31 Download gff for
BS07669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-PA | 1..848 | 17..864 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:30:37 Download gff for
BS07669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 146..997 | 10..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:32:15 Download gff for
BS07669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 146..997 | 10..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:32:15 Download gff for
BS07669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14034921..14035772 | 10..864 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:30:37 Download gff for
BS07669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14028021..14028872 | 10..864 | 99 | | Plus |
BS07669.complete Sequence
1778 bp assembled on 2007-10-17
> BS07669.complete
GAAGTTATCAGTCGACATGCTTAAGCTGGGACTCGCGGTCCCCACTCGAT
GGTCCTTCAGATGTCGTCGCCTTGGTGGAATGGCTATCATTAAAGGCGAG
ACAAAAATCTCCGTGGACAAGCAGAAAGCAGTCCAGCCGGAACAGGATGA
GGACCAACAAGAGGTCGAGCCGGATTCCCAGCCGGCGGAAGAAAATCCAA
GTATTCACAGGAACCAGAGAGTATTAGTTAATCATGCCATTCAGGAGATT
CAGCACAGGCCGTTGGAGGTGCCCACAATTATCGGCGATGATACAGTGTA
CACCATGGACACTCAGCGTGTTTGCTGCCCGCATCACCTGCAGACGAACT
TGGCTCACGTCTACTACGCCAATCGCAAGCAAATCGAGGCGGCAATTAAG
TCTGCTCTTTCGGCGCAAGGAACTTGGAGTCTAGTTCCCATCGCCCAGCG
ACTGGCCATTTGGCGACGTGCCGCCACCATTATCGAGGAGGACGAGCTGC
GGCTGAGAGTGTTCCTCATGATGACGCTGAGCAAAACCGCCGACGATGCG
ACGCGGGACATTCGGCGGCTACTCACATCGCTGAGGGCCAATGCTGACTA
TTTGGAGCATCTGTCCGAGCTGCGCTTTGAGATCCAGGGTGATATGAATG
TATTCCCCAGCTTTCATTTGCGACCCATGGATGGATTTGTGGCCGCACTG
GCACCATTTGAATCGGTGGCCTTGTCATCCAGCTTGGCCCTCTGTCCGGC
GCTCATGGGCAACACGGTGTTGTGGAATCCCTCATTGGAAGTGGCACCAG
TGAGCTATTTAATTTTCAGAGCCTTCCAGGAGGCGGGTTTGCCCAGCGGC
GTTATCAACTTTGTGCCGGCCAACGAGCGTCTGTTCTTGGACACCATCAC
GGATGCCGTGCACTTTGCCGGACTGAATACTCAAGCGAGTGCAGCTTTTT
ACAGGCATGTGCACAAGCTGGTGAGCGATCGAATGGAGCGATACATCTGT
TTTCCTCGTCTGGTGGCCGAGTGCCCGGGTCAGAACTTTCATTTTGTCCA
TGCCAGCGCTAAGGTGGAATCTGTCGTCTCAGCCACCGTGCAGGCGGCCT
TTGGCTTTGCCGGACAGTATGCCAACTCGCTCTCCCGGATGTATGTGCCC
TCGTCAATGTGGCCACGCCTCAGGGAGGAGTTGGTGGAGGCCACGGAGCA
ACTGACCATCGGAGACCCCATCGAATCGGAAACGGATATAGGAGCGATGG
TGCATATAAATGACTTCCGGCGGATGCAGAAACTACTGCAGCGCACCAAG
AACATGGAGCAGTTGTGCGGAGGCAGCTGTGATGACAGCACTGGTAGATT
CGTTGATCCAACGATTGTCCGGGTGTCGGATCCATTGGATCCACTGCTGT
GTGAGCCCTGCTGCGGACCGTTCTTGCCGGTGTTCGTCTATTCGGACGAT
TCCTTCAGTGAGGCTCTCAAGCTTGCCGCCAATCAGTCCAGATACGCGCT
CTCCGGCTCCATATTCGCAAGTCAGGATGAGGTTATCCTTCACTGCCTGA
ACCAACTGCGAATGTCCGCTAGTAATCTCTACGTGAATGAGCGATGCACG
GGTAGCACGTACGGGCTGACTCCCTTTGGTGGAAATCGGTTGTCCGGGAC
AAACGATAAATCCGGATCTGCCTACTTCCTAATGCGCTGGAGCTCGCCGC
TGCTCATCGAGGAGACTGTTGATGGTCCACCTCCCATGCGTGGATCAAAT
ACGTTTCCCTGAAAGCTTTCTAGACCAT
BS07669.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:18:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-RA | 1746 | CG6661-PA | 1..1746 | 17..1762 | 8730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:18:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-RA | 1976 | CG6661-RA | 150..1895 | 17..1762 | 8730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:18:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14034925..14036670 | 17..1762 | 8730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:18:45 has no hits.
BS07669.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:08:01 Download gff for
BS07669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 1..1746 | 17..1762 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:37:32 Download gff for
BS07669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 146..1904 | 10..1774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:10 Download gff for
BS07669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 150..1894 | 17..1761 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:42:32 Download gff for
BS07669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 150..1894 | 17..1761 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:45 Download gff for
BS07669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 150..1894 | 17..1761 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:45 Download gff for
BS07669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14034925..14036669 | 17..1761 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:10 Download gff for
BS07669.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14028025..14029769 | 17..1761 | 100 | | Plus |
BS07669.pep Sequence
Translation from 16 to 1761
> BS07669.pep
MLKLGLAVPTRWSFRCRRLGGMAIIKGETKISVDKQKAVQPEQDEDQQEV
EPDSQPAEENPSIHRNQRVLVNHAIQEIQHRPLEVPTIIGDDTVYTMDTQ
RVCCPHHLQTNLAHVYYANRKQIEAAIKSALSAQGTWSLVPIAQRLAIWR
RAATIIEEDELRLRVFLMMTLSKTADDATRDIRRLLTSLRANADYLEHLS
ELRFEIQGDMNVFPSFHLRPMDGFVAALAPFESVALSSSLALCPALMGNT
VLWNPSLEVAPVSYLIFRAFQEAGLPSGVINFVPANERLFLDTITDAVHF
AGLNTQASAAFYRHVHKLVSDRMERYICFPRLVAECPGQNFHFVHASAKV
ESVVSATVQAAFGFAGQYANSLSRMYVPSSMWPRLREELVEATEQLTIGD
PIESETDIGAMVHINDFRRMQKLLQRTKNMEQLCGGSCDDSTGRFVDPTI
VRVSDPLDPLLCEPCCGPFLPVFVYSDDSFSEALKLAANQSRYALSGSIF
ASQDEVILHCLNQLRMSASNLYVNERCTGSTYGLTPFGGNRLSGTNDKSG
SAYFLMRWSSPLLIEETVDGPPPMRGSNTFP*
BS07669.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-PA | 581 | CG6661-PA | 1..581 | 1..581 | 3019 | 100 | Plus |
| P5CDh1-PE | 574 | CG7145-PE | 72..560 | 84..567 | 964 | 39.9 | Plus |
| P5CDh1-PF | 574 | CG7145-PF | 72..560 | 84..567 | 964 | 39.9 | Plus |
| P5CDh1-PD | 574 | CG7145-PD | 72..560 | 84..567 | 964 | 39.9 | Plus |
| P5CDh1-PB | 574 | CG7145-PB | 72..560 | 84..567 | 964 | 39.9 | Plus |
