Clone Sequence Records
BS07680.3prime Sequence
926 bp (876 high quality bases) assembled on 2006-01-06
> BS07680.3prime
ATGGTCTAGAAAGCTTTTAATCATAATTTCTCCTTTTCTTTTTCTGTTCT
TGGGGATCAGTATCACTCTCCTCCAGTTCGCTCTTGTTGCGTCGCTTCTC
ATAAATGAGAATGATGATGCACAGAATCAGCACCTCAGCACAGATGCCCA
GGAAAGGCCACAAGGCGGCAAATTTGCCCTTAACACGCACAGTTGTGACG
TCGCTGGCAGGAGTGGTGGTGTTCCCACCGTAGACATTGGCCGCATTTCG
TCCAATGCATTTGTATTCGCCTCTGTCGTCCAATGTCACATTATCCAGTG
TCAGAATGGCGTTAGGAACACCATTATCGTCTGGTTTGAGAATGAAGCGA
TCTGTGGCATTTGTCAGCGTTACATTGGCAAAGGTCCATGTCAACTCTGG
TTTGGTACCCACAACGCTGCAGGTCACCGACATCTTTTCACCCTCCACAA
CGGCTGTATTTGAAGGCACTCGTACAACAACGCGGGCAATTACTTCGATT
TCCTTGGACACGCCGTCAAACTCGCAACTGTATTTGCCATCGTCGTTCGT
ATCCGTCTTATCGATGATGAACTTGTTCTCGTCTGCGATTAACTTAAAGC
GACCTCTGAGAGAAGGTACATCCGTCACAGCGGTGCCGTTCTTTTTCCAT
ATGAGCACGCCGCCCGGCGTACCGTCTTTCACGTTGCAGCTGAGAACGAG
CGGCGATCTGATGTCGTANAATTTCATTTGATGCTCGGCATTATCATAGT
TTGGCACCAGCTTATCCATCTTGACGGGCAAGAGCGTCTGGTGCTGCAGA
TGCACCTGATGCCCCTGGCCACCCATCAGCATGTGACCGCCAGCACCCAG
CATTGGGCCACTGGCGCCCGCGGAAAAGCCCGCACCAGCAACGCCACCCC
GCCACCCATCATGTCGACTGATTACT
BS07680.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31605-PG | 897 | Bsg-RG | 16..897 | 898..17 | 4391 | 99.8 | Minus |
CG31605-PD | 798 | Bsg-RD | 73..795 | 766..44 | 3596 | 99.8 | Minus |
CG31605-PC | 798 | Bsg-RC | 73..795 | 766..44 | 3596 | 99.8 | Minus |
CG31605-PE | 798 | Bsg-RE | 73..795 | 766..44 | 3596 | 99.8 | Minus |
CG31605-PF | 798 | Bsg-RF | 73..795 | 766..44 | 3596 | 99.8 | Minus |
CG31605-PH | 798 | Bsg-RH | 73..795 | 766..44 | 3596 | 99.8 | Minus |
CG31605-PI | 798 | Bsg-RI | 73..795 | 766..44 | 3596 | 99.8 | Minus |
CG31605-PB | 798 | Bsg-RB | 73..795 | 766..44 | 3596 | 99.8 | Minus |
CG31605-PA | 798 | Bsg-RA | 73..795 | 766..44 | 3596 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:55:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-RG | 8453 | CG31605-RG | 1533..2432 | 913..15 | 4464 | 99.8 | Minus |
Bsg-RB | 2744 | CG31605-RB | 445..1167 | 766..44 | 3604 | 99.9 | Minus |
Bsg-RH | 3001 | CG31605-RH | 702..1424 | 766..44 | 3604 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8107237..8107448 | 379..168 | 1030 | 99.1 | Minus |
2L | 23513712 | 2L | 8106839..8107000 | 648..487 | 810 | 100 | Minus |
2L | 23513712 | 2L | 8103355..8103503 | 913..766 | 695 | 99.3 | Minus |
2L | 23513712 | 2L | 8107747..8107881 | 178..44 | 675 | 100 | Minus |
2L | 23513712 | 2L | 8105691..8105810 | 766..647 | 589 | 99.2 | Minus |
2L | 23513712 | 2L | 8107065..8107173 | 487..379 | 545 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:55:27 has no hits.
BS07680.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:20 Download gff for
BS07680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-PG | 1..897 | 17..912 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:02 Download gff for
BS07680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31605-PG | 1..897 | 17..912 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:06:40 Download gff for
BS07680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1528..2438 | 7..919 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:15:23 Download gff for
BS07680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1528..2438 | 7..919 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:15:23 Download gff for
BS07680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8103350..8103503 | 766..919 | 97 | -> | Minus |
2L | 8105692..8105809 | 648..765 | 99 | -> | Minus |
2L | 8106840..8107000 | 487..647 | 100 | -> | Minus |
2L | 8107066..8107173 | 379..486 | 100 | -> | Minus |
2L | 8107238..8107438 | 178..378 | 100 | -> | Minus |
2L | 8107748..8107880 | 45..177 | 100 | -> | Minus |
2L | 8110481..8110516 | 7..44 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:06:40 Download gff for
BS07680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8103350..8103503 | 766..919 | 97 | -> | Minus |
arm_2L | 8105692..8105809 | 648..765 | 99 | -> | Minus |
arm_2L | 8106840..8107000 | 487..647 | 100 | -> | Minus |
arm_2L | 8107066..8107173 | 379..486 | 100 | -> | Minus |
arm_2L | 8107238..8107438 | 178..378 | 100 | -> | Minus |
arm_2L | 8107748..8107880 | 45..177 | 100 | -> | Minus |
arm_2L | 8110481..8110516 | 7..44 | 92 | | Minus |
BS07680.5prime Sequence
880 bp (777 high quality bases) assembled on 2006-01-06
> BS07680.5prime
GAAGTTATCAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGG
GCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATG
CTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTT
GCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATC
AAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTG
AAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGC
TGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACG
AGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATGGCAAATAC
AGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATTGCCCGCGT
TGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGAAAAGATGT
CGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACATGGACCTTT
GCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTCAAACCAGA
CGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGTGACATTGG
ACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCAATGTCTAC
GGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTGCGTGTTAA
GGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGCTGAGGTGC
TGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCAACAAGAGC
GAACTGGAGGAGAGTGATACTGATCCCCAA
BS07680.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31605-PG | 897 | Bsg-RG | 1..864 | 17..880 | 4320 | 100 | Plus |
CG31605-PD | 798 | Bsg-RD | 73..789 | 164..880 | 3585 | 100 | Plus |
CG31605-PC | 798 | Bsg-RC | 73..789 | 164..880 | 3585 | 100 | Plus |
CG31605-PE | 798 | Bsg-RE | 73..789 | 164..880 | 3585 | 100 | Plus |
CG31605-PF | 798 | Bsg-RF | 73..789 | 164..880 | 3585 | 100 | Plus |
CG31605-PH | 798 | Bsg-RH | 73..789 | 164..880 | 3585 | 100 | Plus |
CG31605-PI | 798 | Bsg-RI | 73..789 | 164..880 | 3585 | 100 | Plus |
CG31605-PB | 798 | Bsg-RB | 73..789 | 164..880 | 3585 | 100 | Plus |
CG31605-PA | 798 | Bsg-RA | 73..789 | 164..880 | 3585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:25:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-RG | 8453 | CG31605-RG | 1533..2397 | 16..880 | 4325 | 100 | Plus |
Bsg-RB | 2744 | CG31605-RB | 445..1161 | 164..880 | 3585 | 100 | Plus |
Bsg-RH | 3001 | CG31605-RH | 702..1418 | 164..880 | 3585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:25:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8107237..8107448 | 551..762 | 1030 | 99.1 | Plus |
2L | 23513712 | 2L | 8106839..8107000 | 282..443 | 810 | 100 | Plus |
2L | 23513712 | 2L | 8103355..8103503 | 16..164 | 745 | 100 | Plus |
2L | 23513712 | 2L | 8107747..8107875 | 752..880 | 645 | 100 | Plus |
2L | 23513712 | 2L | 8105691..8105810 | 164..283 | 600 | 100 | Plus |
2L | 23513712 | 2L | 8107065..8107173 | 443..551 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:25:18 has no hits.
BS07680.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:21 Download gff for
BS07680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-PG | 1..862 | 17..878 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:04 Download gff for
BS07680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31605-PG | 1..862 | 17..878 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:32:35 Download gff for
BS07680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1528..2395 | 10..878 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:38:42 Download gff for
BS07680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1528..2395 | 10..878 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:38:42 Download gff for
BS07680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8107066..8107173 | 444..551 | 100 | -> | Plus |
2L | 8107238..8107438 | 552..752 | 100 | -> | Plus |
2L | 8107748..8107873 | 753..878 | 100 | | Plus |
2L | 8103350..8103503 | 10..164 | 98 | -> | Plus |
2L | 8105692..8105809 | 165..282 | 100 | -> | Plus |
2L | 8106840..8107000 | 283..443 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:32:35 Download gff for
BS07680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8103350..8103503 | 10..164 | 98 | -> | Plus |
arm_2L | 8107238..8107438 | 552..752 | 100 | -> | Plus |
arm_2L | 8105692..8105809 | 165..282 | 100 | -> | Plus |
arm_2L | 8106840..8107000 | 283..443 | 100 | -> | Plus |
arm_2L | 8107066..8107173 | 444..551 | 100 | -> | Plus |
arm_2L | 8107748..8107873 | 753..878 | 100 | | Plus |
BS07680.complete Sequence
929 bp (929 high quality bases) assembled on 2005-12-21
> BS07680.complete
GAAGTTATCAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGG
GCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATG
CTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTT
GCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATC
AAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTG
AAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGC
TGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACG
AGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATGGCAAATAC
AGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATTGCCCGCGT
TGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGAAAAGATGT
CGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACATGGACCTTT
GCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTCAAACCAGA
CGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGTGACATTGG
ACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCAATGTCTAC
GGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTGCGTGTTAA
GGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGCTGAGGTGC
TGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCAACAAGAGC
GAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAGAAAAGGAG
AAATTATGATTAAAAGCTTTCTAGACCAT
BS07680.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:10:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-RG | 1947 | CG31605-PG | 1050..1947 | 16..913 | 4490 | 100 | Plus |
Bsg-RB | 798 | CG31605-PB | 73..795 | 164..886 | 3615 | 100 | Plus |
Bsg-RH | 798 | CG31605-PH | 73..795 | 164..886 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:10:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-RG | 8453 | CG31605-RG | 1533..2432 | 16..915 | 4500 | 100 | Plus |
Bsg-RB | 2744 | CG31605-RB | 445..1167 | 164..886 | 3615 | 100 | Plus |
Bsg-RH | 3001 | CG31605-RH | 702..1424 | 164..886 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:10:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8107237..8107448 | 551..762 | 1030 | 99.1 | Plus |
2L | 23513712 | 2L | 8106839..8107000 | 282..443 | 810 | 100 | Plus |
2L | 23513712 | 2L | 8103355..8103503 | 16..164 | 745 | 100 | Plus |
2L | 23513712 | 2L | 8107747..8107881 | 752..886 | 675 | 100 | Plus |
2L | 23513712 | 2L | 8105691..8105810 | 164..283 | 600 | 100 | Plus |
2L | 23513712 | 2L | 8107065..8107173 | 443..551 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:10:38 has no hits.
BS07680.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:41 Download gff for
BS07680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1045..1947 | 10..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:34 Download gff for
BS07680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1463..2373 | 10..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:57 Download gff for
BS07680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1534..2428 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:41 Download gff for
BS07680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1463..2373 | 10..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:47 Download gff for
BS07680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1534..2428 | 17..911 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:47 Download gff for
BS07680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8107748..8107880 | 753..885 | 100 | -> | Plus |
2L | 8110481..8110506 | 886..911 | 100 | | Plus |
2L | 8103356..8103503 | 17..164 | 100 | -> | Plus |
2L | 8105692..8105809 | 165..282 | 100 | -> | Plus |
2L | 8106840..8107000 | 283..443 | 100 | -> | Plus |
2L | 8107066..8107173 | 444..551 | 100 | -> | Plus |
2L | 8107238..8107438 | 552..752 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:57 Download gff for
BS07680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8103356..8103503 | 17..164 | 100 | -> | Plus |
arm_2L | 8105692..8105809 | 165..282 | 100 | -> | Plus |
arm_2L | 8106840..8107000 | 283..443 | 100 | -> | Plus |
arm_2L | 8107066..8107173 | 444..551 | 100 | -> | Plus |
arm_2L | 8107238..8107438 | 552..752 | 100 | -> | Plus |
arm_2L | 8107748..8107880 | 753..885 | 100 | -> | Plus |
arm_2L | 8110481..8110506 | 886..911 | 100 | | Plus |
BS07680.pep Sequence
Translation from 16 to 912
> BS07680.pep
MMGGGGGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMD
KLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTDVP
SLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRVP
SNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFILKPDDNGVP
NAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTVRVKGKFAA
LWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYD*
BS07680.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-PG | 648 | CG31605-PG | 351..648 | 1..298 | 1566 | 100 | Plus |
Bsg-PB | 265 | CG31605-PB | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PH | 265 | CG31605-PH | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PF | 265 | CG31605-PF | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PA | 265 | CG31605-PA | 24..265 | 49..290 | 1262 | 99.6 | Plus |