Clone BS07680 Report

Search the DGRC for BS07680

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:76
Well:80
Vector:pDNR-Dual
Associated Gene/Transcriptobsolete transcript model
Protein status:BS07680.pep: validated full length
Sequenced Size:16

Clone Sequence Records

BS07680.3prime Sequence

926 bp (876 high quality bases) assembled on 2006-01-06

> BS07680.3prime
ATGGTCTAGAAAGCTTTTAATCATAATTTCTCCTTTTCTTTTTCTGTTCT
TGGGGATCAGTATCACTCTCCTCCAGTTCGCTCTTGTTGCGTCGCTTCTC
ATAAATGAGAATGATGATGCACAGAATCAGCACCTCAGCACAGATGCCCA
GGAAAGGCCACAAGGCGGCAAATTTGCCCTTAACACGCACAGTTGTGACG
TCGCTGGCAGGAGTGGTGGTGTTCCCACCGTAGACATTGGCCGCATTTCG
TCCAATGCATTTGTATTCGCCTCTGTCGTCCAATGTCACATTATCCAGTG
TCAGAATGGCGTTAGGAACACCATTATCGTCTGGTTTGAGAATGAAGCGA
TCTGTGGCATTTGTCAGCGTTACATTGGCAAAGGTCCATGTCAACTCTGG
TTTGGTACCCACAACGCTGCAGGTCACCGACATCTTTTCACCCTCCACAA
CGGCTGTATTTGAAGGCACTCGTACAACAACGCGGGCAATTACTTCGATT
TCCTTGGACACGCCGTCAAACTCGCAACTGTATTTGCCATCGTCGTTCGT
ATCCGTCTTATCGATGATGAACTTGTTCTCGTCTGCGATTAACTTAAAGC
GACCTCTGAGAGAAGGTACATCCGTCACAGCGGTGCCGTTCTTTTTCCAT
ATGAGCACGCCGCCCGGCGTACCGTCTTTCACGTTGCAGCTGAGAACGAG
CGGCGATCTGATGTCGTANAATTTCATTTGATGCTCGGCATTATCATAGT
TTGGCACCAGCTTATCCATCTTGACGGGCAAGAGCGTCTGGTGCTGCAGA
TGCACCTGATGCCCCTGGCCACCCATCAGCATGTGACCGCCAGCACCCAG
CATTGGGCCACTGGCGCCCGCGGAAAAGCCCGCACCAGCAACGCCACCCC
GCCACCCATCATGTCGACTGATTACT

BS07680.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG31605-PG 897 Bsg-RG 16..897 898..17 4391 99.8 Minus
CG31605-PD 798 Bsg-RD 73..795 766..44 3596 99.8 Minus
CG31605-PC 798 Bsg-RC 73..795 766..44 3596 99.8 Minus
CG31605-PE 798 Bsg-RE 73..795 766..44 3596 99.8 Minus
CG31605-PF 798 Bsg-RF 73..795 766..44 3596 99.8 Minus
CG31605-PH 798 Bsg-RH 73..795 766..44 3596 99.8 Minus
CG31605-PI 798 Bsg-RI 73..795 766..44 3596 99.8 Minus
CG31605-PB 798 Bsg-RB 73..795 766..44 3596 99.8 Minus
CG31605-PA 798 Bsg-RA 73..795 766..44 3596 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 8453 CG31605-RG 1533..2432 913..15 4464 99.8 Minus
Bsg-RB 2744 CG31605-RB 445..1167 766..44 3604 99.9 Minus
Bsg-RH 3001 CG31605-RH 702..1424 766..44 3604 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8107237..8107448 379..168 1030 99.1 Minus
2L 23513712 2L 8106839..8107000 648..487 810 100 Minus
2L 23513712 2L 8103355..8103503 913..766 695 99.3 Minus
2L 23513712 2L 8107747..8107881 178..44 675 100 Minus
2L 23513712 2L 8105691..8105810 766..647 589 99.2 Minus
2L 23513712 2L 8107065..8107173 487..379 545 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:55:27 has no hits.

BS07680.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:20 Download gff for BS07680.3prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-PG 1..897 17..912 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:02 Download gff for BS07680.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31605-PG 1..897 17..912 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:06:40 Download gff for BS07680.3prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1528..2438 7..919 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:15:23 Download gff for BS07680.3prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1528..2438 7..919 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:15:23 Download gff for BS07680.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8103350..8103503 766..919 97 -> Minus
2L 8105692..8105809 648..765 99 -> Minus
2L 8106840..8107000 487..647 100 -> Minus
2L 8107066..8107173 379..486 100 -> Minus
2L 8107238..8107438 178..378 100 -> Minus
2L 8107748..8107880 45..177 100 -> Minus
2L 8110481..8110516 7..44 92   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:06:40 Download gff for BS07680.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8103350..8103503 766..919 97 -> Minus
arm_2L 8105692..8105809 648..765 99 -> Minus
arm_2L 8106840..8107000 487..647 100 -> Minus
arm_2L 8107066..8107173 379..486 100 -> Minus
arm_2L 8107238..8107438 178..378 100 -> Minus
arm_2L 8107748..8107880 45..177 100 -> Minus
arm_2L 8110481..8110516 7..44 92   Minus

BS07680.5prime Sequence

880 bp (777 high quality bases) assembled on 2006-01-06

> BS07680.5prime
GAAGTTATCAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGG
GCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATG
CTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTT
GCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATC
AAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTG
AAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGC
TGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACG
AGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATGGCAAATAC
AGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATTGCCCGCGT
TGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGAAAAGATGT
CGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACATGGACCTTT
GCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTCAAACCAGA
CGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGTGACATTGG
ACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCAATGTCTAC
GGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTGCGTGTTAA
GGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGCTGAGGTGC
TGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCAACAAGAGC
GAACTGGAGGAGAGTGATACTGATCCCCAA

BS07680.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31605-PG 897 Bsg-RG 1..864 17..880 4320 100 Plus
CG31605-PD 798 Bsg-RD 73..789 164..880 3585 100 Plus
CG31605-PC 798 Bsg-RC 73..789 164..880 3585 100 Plus
CG31605-PE 798 Bsg-RE 73..789 164..880 3585 100 Plus
CG31605-PF 798 Bsg-RF 73..789 164..880 3585 100 Plus
CG31605-PH 798 Bsg-RH 73..789 164..880 3585 100 Plus
CG31605-PI 798 Bsg-RI 73..789 164..880 3585 100 Plus
CG31605-PB 798 Bsg-RB 73..789 164..880 3585 100 Plus
CG31605-PA 798 Bsg-RA 73..789 164..880 3585 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 8453 CG31605-RG 1533..2397 16..880 4325 100 Plus
Bsg-RB 2744 CG31605-RB 445..1161 164..880 3585 100 Plus
Bsg-RH 3001 CG31605-RH 702..1418 164..880 3585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:25:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8107237..8107448 551..762 1030 99.1 Plus
2L 23513712 2L 8106839..8107000 282..443 810 100 Plus
2L 23513712 2L 8103355..8103503 16..164 745 100 Plus
2L 23513712 2L 8107747..8107875 752..880 645 100 Plus
2L 23513712 2L 8105691..8105810 164..283 600 100 Plus
2L 23513712 2L 8107065..8107173 443..551 545 100 Plus
Blast to na_te.dros performed on 2015-02-10 23:25:18 has no hits.

BS07680.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:21 Download gff for BS07680.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-PG 1..862 17..878 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:04 Download gff for BS07680.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31605-PG 1..862 17..878 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:32:35 Download gff for BS07680.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1528..2395 10..878 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:38:42 Download gff for BS07680.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1528..2395 10..878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:38:42 Download gff for BS07680.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8107066..8107173 444..551 100 -> Plus
2L 8107238..8107438 552..752 100 -> Plus
2L 8107748..8107873 753..878 100   Plus
2L 8103350..8103503 10..164 98 -> Plus
2L 8105692..8105809 165..282 100 -> Plus
2L 8106840..8107000 283..443 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:32:35 Download gff for BS07680.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8103350..8103503 10..164 98 -> Plus
arm_2L 8107238..8107438 552..752 100 -> Plus
arm_2L 8105692..8105809 165..282 100 -> Plus
arm_2L 8106840..8107000 283..443 100 -> Plus
arm_2L 8107066..8107173 444..551 100 -> Plus
arm_2L 8107748..8107873 753..878 100   Plus

BS07680.complete Sequence

929 bp (929 high quality bases) assembled on 2005-12-21

> BS07680.complete
GAAGTTATCAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGG
GCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATG
CTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTT
GCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATC
AAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTG
AAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGC
TGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACG
AGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATGGCAAATAC
AGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATTGCCCGCGT
TGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGAAAAGATGT
CGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACATGGACCTTT
GCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTCAAACCAGA
CGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGTGACATTGG
ACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCAATGTCTAC
GGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTGCGTGTTAA
GGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGCTGAGGTGC
TGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCAACAAGAGC
GAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAGAAAAGGAG
AAATTATGATTAAAAGCTTTCTAGACCAT

BS07680.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 1947 CG31605-PG 1050..1947 16..913 4490 100 Plus
Bsg-RB 798 CG31605-PB 73..795 164..886 3615 100 Plus
Bsg-RH 798 CG31605-PH 73..795 164..886 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 8453 CG31605-RG 1533..2432 16..915 4500 100 Plus
Bsg-RB 2744 CG31605-RB 445..1167 164..886 3615 100 Plus
Bsg-RH 3001 CG31605-RH 702..1424 164..886 3615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8107237..8107448 551..762 1030 99.1 Plus
2L 23513712 2L 8106839..8107000 282..443 810 100 Plus
2L 23513712 2L 8103355..8103503 16..164 745 100 Plus
2L 23513712 2L 8107747..8107881 752..886 675 100 Plus
2L 23513712 2L 8105691..8105810 164..283 600 100 Plus
2L 23513712 2L 8107065..8107173 443..551 545 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:10:38 has no hits.

BS07680.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:41 Download gff for BS07680.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1045..1947 10..913 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:34 Download gff for BS07680.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1463..2373 10..923 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:57 Download gff for BS07680.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1534..2428 17..911 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:41 Download gff for BS07680.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1463..2373 10..923 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:47 Download gff for BS07680.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1534..2428 17..911 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:47 Download gff for BS07680.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8107748..8107880 753..885 100 -> Plus
2L 8110481..8110506 886..911 100   Plus
2L 8103356..8103503 17..164 100 -> Plus
2L 8105692..8105809 165..282 100 -> Plus
2L 8106840..8107000 283..443 100 -> Plus
2L 8107066..8107173 444..551 100 -> Plus
2L 8107238..8107438 552..752 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:57 Download gff for BS07680.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8103356..8103503 17..164 100 -> Plus
arm_2L 8105692..8105809 165..282 100 -> Plus
arm_2L 8106840..8107000 283..443 100 -> Plus
arm_2L 8107066..8107173 444..551 100 -> Plus
arm_2L 8107238..8107438 552..752 100 -> Plus
arm_2L 8107748..8107880 753..885 100 -> Plus
arm_2L 8110481..8110506 886..911 100   Plus

BS07680.pep Sequence

Translation from 16 to 912

> BS07680.pep
MMGGGGGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMD
KLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTDVP
SLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRVP
SNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFILKPDDNGVP
NAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTVRVKGKFAA
LWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYD*

BS07680.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-PG 648 CG31605-PG 351..648 1..298 1566 100 Plus
Bsg-PB 265 CG31605-PB 24..265 49..290 1262 99.6 Plus
Bsg-PH 265 CG31605-PH 24..265 49..290 1262 99.6 Plus
Bsg-PF 265 CG31605-PF 24..265 49..290 1262 99.6 Plus
Bsg-PA 265 CG31605-PA 24..265 49..290 1262 99.6 Plus