Clone BS07695 Report

Search the DGRC for BS07695

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:76
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptLapsyn-RA
Protein status:BS07695.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07695.3prime Sequence

860 bp (787 high quality bases) assembled on 2006-01-06

> BS07695.3prime
ATGGTCTAGAAAGCTTCTATTTTCGGGCAATATCACAGTGCAGAGGCTCG
TCCTCCGGCTGACGGTTGTTGATGGCGTTTCTGGGCGAGATCACAAACGG
CTTTCGCTTCTGGGCATTCCTCTTTCGTCGCTGGGCTCGTTTTCTCCTAC
AGTGTATCACGCAGAAGATGACAATTAAAAGCACAAAACAAACTCCGCCA
AAGCAGCCAGCTCCAAAGAGCCAGAAGCTGCGCGTTTCGGCAAACTGCAG
TGTCGTCTGGCAACTGGCGAATGTTGGCGAATGGATCGTTCGATTGTAGG
GCAGTGGACACTCGCGGATGTCGAGCGCCTCCAAGCAAACTGGCACGAAC
TTCGGACTGGCGCCGAGCATCATAAGATGGTTGGTGACCTGCTGGCAGCC
ACACTGGCTCAACTGCGACTTGGTCAGATCGATGACCTGCAGGTGGCACA
TATTCGCCAGGCTGTCGATCCTGAAGTTCTGCAGCGGATTCATCGAGGCA
TTCAGTTGCCAGAGTTTTGGAAGTATGCCCAGATCGGGTAACTCCTGTAG
CTCGCAACCTGCCACGTTCAGGTACTCCAGTGGAGCACGAATGGGCTTCT
CCAGTGCCTGAAGATTGAGGGATGTTAGCTCATTGCTATCGATGTATAGG
TTTCTCAGTCGCGGCAGCTGGAACAACTCCAGCGGTATCGTTGTCAGTCC
ATTATTCGAAAGATCAATTTCCTGGAGCGAGGTGAGTGGCTCGAAGGTTC
CCACCTCCACCGATAAGATCATGTTATCATAGAGCATCAGAAACTTAATG
TCCGTGTATCGCTGAAACGAGCTAGTTTTCAGCTTCCTGATGCGATTGTG
CGATAGATCC

BS07695.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15658-PA 1032 CG15658-RA 189..1032 860..17 4220 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 07:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1630 CG15658-RA 488..1331 860..17 4220 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 07:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21198226..21198434 725..517 1045 100 Minus
2R 25286936 2R 21198492..21198677 516..331 930 100 Minus
2R 25286936 2R 21198975..21199132 174..17 790 100 Minus
2R 25286936 2R 21198761..21198917 331..175 785 100 Minus
2R 25286936 2R 21198026..21198165 860..721 700 100 Minus
Blast to na_te.dros performed on 2015-02-01 07:57:26 has no hits.

BS07695.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:48 Download gff for BS07695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 189..1032 17..860 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:39 Download gff for BS07695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 189..1032 17..860 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:19:06 Download gff for BS07695.3prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 488..1339 6..860 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:47:39 Download gff for BS07695.3prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 488..1339 6..860 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:47:39 Download gff for BS07695.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21198026..21198164 722..860 100 -> Minus
2R 21198230..21198434 517..721 100 -> Minus
2R 21198492..21198677 331..516 100 -> Minus
2R 21198762..21198917 175..330 100 -> Minus
2R 21198975..21199140 6..174 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:19:06 Download gff for BS07695.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17085531..17085669 722..860 100 -> Minus
arm_2R 17085735..17085939 517..721 100 -> Minus
arm_2R 17085997..17086182 331..516 100 -> Minus
arm_2R 17086267..17086422 175..330 100 -> Minus
arm_2R 17086480..17086645 6..174 97   Minus

BS07695.5prime Sequence

923 bp (805 high quality bases) assembled on 2006-01-06

> BS07695.5prime
GAAGTTATCAGTCGACATGGAACTGCATTGGCAGCTGCTGACGTTCATCG
TGTGCCTCCAGTTGTTGCATTCCGCCGGATTCATCATTCAGTCGGAAGTG
CGCAAGTGCACGTACGGCCATATCGATAAGCTGCTCCGGATTCGTTGCTA
CGACTTGGACCTCAAGGAGGTGCCACAGAACCTCAAGAGTTCGGTGGAGG
TTCTGGATCTATCGCACAATCGCATCAGGAAGCTGAAAACTAGCTCGTTT
CAGCGATACACGGACATTAAGTTTCTGATGCTCTATGATAACATGATCTT
ATCGGTGGAGGTGGGAACCTTCGAGCCACTCACCTCGCTCCAGGAAATTG
ATCTTTCGAATAATGGACTGACAACGATACCGCTGGAGTTGTTCCAGCTG
CCGCGACTGAGAAACCTATACATCGATAGCAATGAGCTAACATCCCTCAA
TCTTCAGGCACTGGAGAAGCCCATTCGTGCTCCACTGGAGTACCTGAACG
TGGCAGGTTGCGAGCTACAGGAGTTACCCGATCTGGGCATACTTCCAAAA
CTCTGGCAACTGAATGCCTCGATGAATCCGCTGCAGAACTTCAGGATCGA
CAGCCTGGCGAATATGTGCCACCTGCAGGTCATCGATCTGACCAAGTCGC
AGTTGAGCCAGTGTGGCTGCCAGCAGGTCACCAACCATCTTATGATGCTC
GGCGCCAGTCCGAAGTTCGTGCCAGTTTGCTTGGAGGCGCTCGACATCCG
CGAGTGTCCACTGCCCTACAATCGAACGATCCATTCGCCAACATTCGCCA
GTTGCCAGACGACACTGCAGTTTGCCGAAACGCGCAGCTTCTGGCTCTTT
GGAGCTGGCTGCTTTGGCGGAGTTTGTTTTGTGCTTTTAATTGTCATCTT
CTGCGTGATACACTGTAGGAGAA

BS07695.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15658-PA 1032 CG15658-RA 1..907 17..923 4535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1630 CG15658-RA 299..1206 16..923 4540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21198226..21198434 340..548 1045 100 Plus
2R 25286936 2R 21197610..21197795 16..201 930 100 Plus
2R 25286936 2R 21198492..21198677 549..734 930 100 Plus
2R 25286936 2R 21198761..21198917 734..890 785 100 Plus
2R 25286936 2R 21198019..21198165 198..344 735 100 Plus
Blast to na_te.dros performed on 2015-02-12 12:17:14 has no hits.

BS07695.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:49 Download gff for BS07695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 1..905 17..921 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:41 Download gff for BS07695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 1..905 17..921 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:58:44 Download gff for BS07695.5prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 292..1206 9..923 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:16:27 Download gff for BS07695.5prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 292..1206 9..923 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:16:27 Download gff for BS07695.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21197601..21197793 5..199 97 -> Plus
2R 21198021..21198164 200..343 100 -> Plus
2R 21198230..21198434 344..548 100 -> Plus
2R 21198492..21198677 549..734 100 -> Plus
2R 21198762..21198917 735..890 100 -> Plus
2R 21198975..21199007 891..923 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:58:44 Download gff for BS07695.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17085997..17086182 549..734 100 -> Plus
arm_2R 17086267..17086422 735..890 100 -> Plus
arm_2R 17086480..17086512 891..923 100   Plus
arm_2R 17085735..17085939 344..548 100 -> Plus
arm_2R 17085106..17085298 5..199 97 -> Plus
arm_2R 17085526..17085669 200..343 100 -> Plus

BS07695.complete Sequence

1064 bp (1064 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635953

> BS07695.complete
GAAGTTATCAGTCGACATGGAACTGCATTGGCAGCTGCTGACGTTCATCG
TGTGCCTCCAGTTGTTGCATTCCGCCGGATTCATCATTCAGTCGGAAGTG
CGCAAGTGCACGTACGGCCATATCGATAAGCTGCTCCGGATTCGTTGCTA
CGACTTGGACCTCAAGGAGGTGCCACAGAACCTCAAGAGTTCGGTGGAGG
TTCTGGATCTATCGCACAATCGCATCAGGAAGCTGAAAACTAGCTCGTTT
CAGCGATACACGGACATTAAGTTTCTGATGCTCTATGATAACATGATCTT
ATCGGTGGAGGTGGGAACCTTCGAGCCACTCACCTCGCTCCAGGAAATTG
ATCTTTCGAATAATGGACTGACAACGATACCGCTGGAGTTGTTCCAGCTG
CCGCGACTGAGAAACCTATACATCGATAGCAATGAGCTAACATCCCTCAA
TCTTCAGGCACTGGAGAAGCCCATTCGTGCTCCACTGGAGTACCTGAACG
TGGCAGGTTGCGAGCTACAGGAGTTACCCGATCTGGGCATACTTCCAAAA
CTCTGGCAACTGAATGCCTCGATGAATCCGCTGCAGAACTTCAGGATCGA
CAGCCTGGCGAATATGTGCCACCTGCAGGTCATCGATCTGACCAAGTCGC
AGTTGAGCCAGTGTGGCTGCCAGCAGGTCACCAACCATCTTATGATGCTC
GGCGCCAGTCCGAAGTTCGTGCCAGTTTGCTTGGAGGCGCTCGACATCCG
CGAGTGTCCACTGCCCTACAATCGAACGATCCATTCGCCAACATTCGCCA
GTTGCCAGACGACACTGCAGTTTGCCGAAACGCGCAGCTTCTGGCTCTTT
GGAGCTGGCTGCTTTGGCGGAGTTTGTTTTGTGCTTTTAATTGTCATCTT
CTGCGTGATACACTGTAGGAGAAAACGAGCCCAGCGACGAAAGAGGAATG
CCCAGAAGCGAAAGCCGTTTGTGATCTCGCCCAGAAACGCCATCAACAAC
CGTCAGCCGGAGGACGAGCCTCTGCACTGTGATATTGCCCGAAAATAGAA
GCTTTCTAGACCAT

BS07695.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1032 CG15658-PA 1..1032 17..1048 5160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1630 CG15658-RA 299..1331 16..1048 5165 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21198226..21198434 340..548 1045 100 Plus
2R 25286936 2R 21197610..21197795 16..201 930 100 Plus
2R 25286936 2R 21198492..21198677 549..734 930 100 Plus
2R 25286936 2R 21198975..21199132 891..1048 790 100 Plus
2R 25286936 2R 21198761..21198917 734..890 785 100 Plus
2R 25286936 2R 21198019..21198165 198..344 735 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:41:09 has no hits.

BS07695.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:44 Download gff for BS07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 1..1032 17..1048 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:37 Download gff for BS07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 290..1337 9..1059 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:01:12 Download gff for BS07695.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 300..1324 17..1041 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:44 Download gff for BS07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 290..1337 9..1059 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:24:42 Download gff for BS07695.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 300..1324 17..1041 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:24:42 Download gff for BS07695.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21197611..21197793 17..199 100 -> Plus
2R 21198021..21198164 200..343 100 -> Plus
2R 21198230..21198434 344..548 100 -> Plus
2R 21198492..21198677 549..734 100 -> Plus
2R 21198762..21198917 735..890 100 -> Plus
2R 21198975..21199125 891..1041 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:01:12 Download gff for BS07695.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17085116..17085298 17..199 100 -> Plus
arm_2R 17085526..17085669 200..343 100 -> Plus
arm_2R 17085735..17085939 344..548 100 -> Plus
arm_2R 17085997..17086182 549..734 100 -> Plus
arm_2R 17086267..17086422 735..890 100 -> Plus
arm_2R 17086480..17086630 891..1041 100   Plus

BS07695.pep Sequence

Translation from 16 to 1047

> BS07695.pep
MELHWQLLTFIVCLQLLHSAGFIIQSEVRKCTYGHIDKLLRIRCYDLDLK
EVPQNLKSSVEVLDLSHNRIRKLKTSSFQRYTDIKFLMLYDNMILSVEVG
TFEPLTSLQEIDLSNNGLTTIPLELFQLPRLRNLYIDSNELTSLNLQALE
KPIRAPLEYLNVAGCELQELPDLGILPKLWQLNASMNPLQNFRIDSLANM
CHLQVIDLTKSQLSQCGCQQVTNHLMMLGASPKFVPVCLEALDIRECPLP
YNRTIHSPTFASCQTTLQFAETRSFWLFGAGCFGGVCFVLLIVIFCVIHC
RRKRAQRRKRNAQKRKPFVISPRNAINNRQPEDEPLHCDIARK*

BS07695.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-PA 343 CG15658-PA 1..343 1..343 1802 100 Plus
sli-PB 1469 CG43758-PB 82..238 40..203 202 34.1 Plus
sli-PD 1480 CG43758-PD 82..238 40..203 202 34.1 Plus
sli-PA 1480 CG43758-PA 82..238 40..203 202 34.1 Plus
rk-PA 1360 CG8930-PA 159..345 38..223 183 30.7 Plus