Clone Sequence Records
BS07696.3prime Sequence
869 bp (815 high quality bases) assembled on 2006-01-06
> BS07696.3prime
ATGGTCTAGAAAGCTTTCAGACATCGACGGGTTCCTTGGCGGTCTCCGTG
TCGGTTAATCGCACCACGGTGACCTCGGTGGTGACCCCGTTCAGCACCAT
TGCCATCGATTGCTGATCTCGCCATGGTGTGGTCAAAATTGTGAACCGCT
GACGCAGACTTCCCGGCGTGGAAAGTAGTTTAAATATCGCCACGGCAGGA
ATCATCACAACCGAGGAACCAGCTATGCACCAACCCAGCGCATTGGCCCA
ACTGGGATACACATAGTCCGCATATGTCAGTGGCTCGTAGCCAATCAGCC
CGTAAACCGTGATGAAGAGCAGGAAAATTGGTGCCACAAATCGCCAACAC
ACCTGCCAGTATCTTCCCGGTGGAAAACCAATCATGTCCCGTATATCCTC
GCTAAATCGATTGGTTCCGTAGATCCAGGACACGGCGATTGCCTCAAAGA
ACACGGCCACCAAAATCGAGTAGCCAGCAGCGTAACGATCCAGCAGATGG
AAGAAATAGAAGCCACCCTGAGTGCAACTGGCCAAACCGACCACGAAGTA
CAGGGAAAACAGTCCAGCTACAAACAGCTCTCGGTTTCTTTTGATCTTGG
GAAACTCGTCGCTCAAAGCTGTGATTATAGCCTCTGAACCACCAAACGAA
CTATCCAAGCCCAAAGTTAGCAGCATCATGAAGAATATTAGAGCCCAGAA
AGTGCTGGCCGGCATGGTGGCAATGGCAGCTGGATAGACCACGAAAACCA
GACCAGGTCCTTCGGTGGCAACATCTTCAATTCTTACACCCAGTGTGTGG
GCCATGTAACCCAGCACGGAAGATATCACAAAGCCGGCTATAAAGCTGGT
AGCCGAGTTAATGAAACTG
BS07696.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:53:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8380-PA | 1896 | DAT-RA | 1044..1896 | 869..17 | 4215 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:06:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DAT-RB | 3040 | CG8380-RB | 1367..2219 | 869..17 | 4235 | 99.8 | Minus |
DAT-RA | 3040 | CG8380-RA | 1367..2219 | 869..17 | 4235 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:06:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16559388..16560018 | 17..647 | 3155 | 100 | Plus |
2R | 25286936 | 2R | 16560073..16560295 | 647..869 | 1085 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:06:32 has no hits.
BS07696.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:50 Download gff for
BS07696.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-PA | 1044..1896 | 17..869 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:42 Download gff for
BS07696.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8380-PA | 1044..1896 | 17..869 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:39:33 Download gff for
BS07696.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-RA | 1367..2222 | 11..869 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:12:10 Download gff for
BS07696.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-RA | 1367..2222 | 11..869 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:12:10 Download gff for
BS07696.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16559385..16560017 | 11..646 | 99 | <- | Plus |
2R | 16560073..16560295 | 647..869 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:39:33 Download gff for
BS07696.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12446890..12447522 | 11..646 | 99 | <- | Plus |
arm_2R | 12447578..12447800 | 647..869 | 99 | | Plus |
BS07696.5prime Sequence
914 bp (795 high quality bases) assembled on 2006-01-06
> BS07696.5prime
GAAGTTATCAGTCGACATGTCACCAACCGGACATATATCCAAATCAAAGA
CGCCCACGCCACACGATAACGATAACAATAGCATCAGCGACGAGCGCGAA
ACATGGAGCGGCAAAGTGGATTTTTTATTATCGGTTATTGGATTCGCCGT
CGATTTAGCAAACGTCTGGAGATTTCCCTATTTGTGCTACAAAAATGGCG
GTGGCGCTTTTCTTGTGCCCTACGGCATTATGTTGGTGGTCGGTGGCATT
CCTCTGTTCTATATGGAATTGGCCCTGGGTCAGCACAATCGTAAGGGTGC
CATAACCTGCTGGGGTCGCTTGGTGCCCCTCTTCAAAGGAATTGGATATG
CCGTGGTGCTGATAGCCTTCTATGTGGACTTCTATTACAATGTGATTATT
GCCTGGTCGTTGCGTTTCTTTTTTGCATCCTTCACCAACTCGCTGCCTTG
GACGTCGTGTAATAATATTTGGAACACACCAAATTGTAGACCGTTTGAGA
GCCAAAATGCATCTCGTGTTCCGGTTATTGGTAACTATAGTGACTTGTAT
GCCATGGGAAATCAAAGCCTGCTCTACAATGAGACATATATGAATGGTTC
GAGCTTGGATACGTCAGCGGTTGGCCATGTGGAGGGTTTTCAGTCCGCAG
CATCGGAATATTTTAACCGCTACATTTTGGAGCTGAACCGCAGCGAGGGA
ATCCATGACTTGGGCGCCATCAAATGGGACATGGCGCTGTGCCTTCTGAT
TGTCTACTTAATTTGTTACTTCTCCCTGTGGAAGGGTATCAGCACTTCGG
GGCAGGTTGTGTGGTTTACTGCCCTCTTTCCCTATGCAGTGCTACTGATT
CTTCTAATCAGAGGGCTCACACTGCCGGGATCTTTTCTGGGCATTCAGTA
TTATCTTACGCCCA
BS07696.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:53:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8380-PA | 1896 | DAT-RA | 1..898 | 17..914 | 4440 | 99.7 | Plus |
CG1732-PB | 1527 | CG1732-RB | 237..275 | 160..198 | 145 | 94.8 | Plus |
CG1732-PA | 1911 | CG1732-RA | 237..275 | 160..198 | 145 | 94.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:04:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DAT-RB | 3040 | CG8380-RB | 324..1221 | 17..914 | 4460 | 99.8 | Plus |
DAT-RA | 3040 | CG8380-RA | 324..1221 | 17..914 | 4460 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:04:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16560504..16560751 | 914..667 | 1210 | 99.2 | Minus |
2R | 25286936 | 2R | 16563770..16563957 | 204..17 | 940 | 100 | Minus |
2R | 25286936 | 2R | 16560809..16560982 | 666..493 | 870 | 100 | Minus |
2R | 25286936 | 2R | 16561043..16561199 | 493..337 | 785 | 100 | Minus |
2R | 25286936 | 2R | 16561261..16561397 | 339..203 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:04:16 has no hits.
BS07696.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:20:51 Download gff for
BS07696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-PA | 1..897 | 17..913 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:13:43 Download gff for
BS07696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8380-PA | 1..897 | 17..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:34:09 Download gff for
BS07696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-RA | 313..1220 | 6..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:37:16 Download gff for
BS07696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-RA | 313..1220 | 6..913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:37:16 Download gff for
BS07696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16560505..16560751 | 667..913 | 99 | <- | Minus |
2R | 16560809..16560981 | 494..666 | 100 | <- | Minus |
2R | 16561043..16561197 | 339..493 | 100 | <- | Minus |
2R | 16561262..16561396 | 204..338 | 100 | <- | Minus |
2R | 16563771..16563968 | 6..203 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:34:09 Download gff for
BS07696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12448767..12448901 | 204..338 | 100 | <- | Minus |
arm_2R | 12451276..12451473 | 6..203 | 98 | | Minus |
arm_2R | 12448010..12448256 | 667..913 | 99 | <- | Minus |
arm_2R | 12448314..12448486 | 494..666 | 100 | <- | Minus |
arm_2R | 12448548..12448702 | 339..493 | 100 | <- | Minus |
BS07696.complete Sequence
1928 bp assembled on 2009-08-24
GenBank Submission: KX800770
> BS07696.complete
GAAGTTATCAGTCGACATGTCACCAACCGGACATATATCCAAATCAAAGA
CGCCCACGCCACACGATAACGATAACAATAGCATCAGCGACGAGCGCGAA
ACATGGAGCGGCAAAGTGGATTTTTTATTATCGGTTATTGGATTCGCCGT
CGATTTAGCAAACGTCTGGAGATTTCCCTATTTGTGCTACAAAAATGGCG
GTGGCGCTTTTCTTGTGCCCTACGGCATTATGTTGGTGGTCGGTGGCATT
CCTCTGTTCTATATGGAATTGGCCCTGGGTCAGCACAATCGTAAGGGTGC
CATAACCTGCTGGGGTCGCTTGGTGCCCCTCTTCAAAGGAATTGGATATG
CCGTGGTGCTGATAGCCTTCTATGTGGACTTCTATTACAATGTGATTATT
GCCTGGTCGTTGCGTTTCTTTTTTGCATCCTTCACCAACTCGCTGCCTTG
GACGTCGTGTAATAATATTTGGAACACACCAAATTGTAGACCGTTTGAGA
GCCAAAATGCATCTCGTGTTCCGGTTATTGGTAACTATAGTGACTTGTAT
GCCATGGGAAATCAAAGCCTGCTCTACAATGAGACATATATGAATGGTTC
GAGCTTGGATACGTCAGCGGTTGGCCATGTGGAGGGTTTTCAGTCCGCAG
CATCGGAATATTTTAACCGCTACATTTTGGAGCTGAACCGCAGCGAGGGA
ATCCATGACTTGGGCGCCATCAAATGGGACATGGCGCTGTGCCTTCTGAT
TGTCTACTTAATTTGTTACTTCTCCCTGTGGAAGGGTATCAGCACTTCGG
GCAAGGTTGTGTGGTTTACTGCCCTCTTTCCCTATGCAGTGCTACTGATT
CTTCTAATCAGAGGGCTCACACTGCCGGGATCTTTTCTGGGCATTCAGTA
TTATCTTACGCCCAACTTTAGTGCCATCTATAAGGCTGAGGTCTGGGTGG
ATGCTGCCACCCAGGTGTTTTTCTCATTGGGTCCAGGATTTGGAGTGCTG
CTGGCCTATGCATCCTATAATAAATACCATAACAATGTATACAAGGATGC
TTTGTTAACCAGTTTCATTAACTCGGCTACCAGCTTTATAGCCGGCTTTG
TGATATTCTCCGTGCTGGGTTACATGGCCCACACACTGGGTGTAAGAATT
GAAGATGTTGCCACCGAAGGACCTGGTCTGGTTTTCGTGGTCTATCCAGC
TGCCATTGCCACCATGCCGGCCAGCACTTTCTGGGCTCTAATATTCTTCA
TGATGCTGCTAACTTTGGGCTTGGATAGTTCGTTTGGTGGTTCAGAGGCT
ATAATCACAGCTTTGAGCGACGAGTTTCCCAAGATCAAAAGAAACCGAGA
GCTGTTTGTAGCTGGACTGTTTTCCCTGTACTTCGTGGTCGGTTTGGCCA
GTTGCACTCAGGGTGGCTTCTATTTCTTCCATCTGCTGGATCGTTACGCT
GCTGGCTACTCGATTTTGGTGGCCGTGTTCTTTGAGGCAATCGCCGTGTC
CTGGATCTACGGAACCAATCGATTTAGCGAGGATATACGGGACATGATTG
GTTTTCCACCGGGAAGATACTGGCAGGTGTGTTGGCGATTTGTGGCACCA
ATTTTCCTGCTCTTCATCACGGTTTACGGGCTGATTGGCTACGAGCCACT
GACATATGCGGACTATGTGTATCCCAGTTGGGCCAATGCGCTGGGTTGGT
GCATAGCTGGTTCCTCGGTTGTGATGATTCCTGCCGTGGCGATATTTAAA
CTACTTTCCACGCCGGGAAGTCTGCGTCAGCGGTTCACAATTTTGACCAC
ACCATGGCGAGATCAGCAATCGATGGCAATGGTGCTGAACGGGGTCACCA
CCGAGGTCACCGTGGTGCGATTAACCGACACGGAGACCGCCAAGGAACCC
GTCGATGTCTGAAAGCTTTCTAGACCAT
BS07696.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:27:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DAT-RB | 1935 | CG8380-PB | 1..1896 | 17..1912 | 9480 | 100 | Plus |
DAT-RA | 1896 | CG8380-PA | 1..1896 | 17..1912 | 9480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DAT-RB | 3040 | CG8380-RB | 324..2219 | 17..1912 | 9480 | 100 | Plus |
DAT-RA | 3040 | CG8380-RA | 324..2219 | 17..1912 | 9480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16559388..16560018 | 1912..1282 | 3155 | 100 | Minus |
2R | 25286936 | 2R | 16560373..16560751 | 1045..667 | 1895 | 100 | Minus |
2R | 25286936 | 2R | 16560073..16560315 | 1282..1040 | 1200 | 99.6 | Minus |
2R | 25286936 | 2R | 16563770..16563957 | 204..17 | 940 | 100 | Minus |
2R | 25286936 | 2R | 16560809..16560982 | 666..493 | 870 | 100 | Minus |
2R | 25286936 | 2R | 16561043..16561199 | 493..337 | 785 | 100 | Minus |
2R | 25286936 | 2R | 16561261..16561397 | 339..203 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:27:45 has no hits.
BS07696.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:01:35 Download gff for
BS07696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-RA | 344..2238 | 17..1911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:48:18 Download gff for
BS07696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-RA | 324..2218 | 17..1911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:05 Download gff for
BS07696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DAT-RA | 324..2218 | 17..1911 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:05 Download gff for
BS07696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16560809..16560981 | 494..666 | 100 | <- | Minus |
2R | 16561043..16561197 | 339..493 | 100 | <- | Minus |
2R | 16561262..16561396 | 204..338 | 100 | <- | Minus |
2R | 16563771..16563957 | 17..203 | 100 | | Minus |
2R | 16560374..16560751 | 667..1044 | 100 | <- | Minus |
2R | 16559389..16560017 | 1283..1911 | 100 | <- | Minus |
2R | 16560073..16560310 | 1045..1282 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:48:18 Download gff for
BS07696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12446894..12447522 | 1283..1911 | 100 | <- | Minus |
arm_2R | 12447578..12447815 | 1045..1282 | 100 | <- | Minus |
arm_2R | 12447879..12448256 | 667..1044 | 100 | <- | Minus |
arm_2R | 12448314..12448486 | 494..666 | 100 | <- | Minus |
arm_2R | 12448548..12448702 | 339..493 | 100 | <- | Minus |
arm_2R | 12448767..12448901 | 204..338 | 100 | <- | Minus |
arm_2R | 12451276..12451462 | 17..203 | 100 | | Minus |
BS07696.pep Sequence
Translation from 16 to 1911
> BS07696.pep
MSPTGHISKSKTPTPHDNDNNSISDERETWSGKVDFLLSVIGFAVDLANV
WRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQHNRKGAITCWG
RLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNN
IWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTS
AVGHVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLIC
YFSLWKGISTSGKVVWFTALFPYAVLLILLIRGLTLPGSFLGIQYYLTPN
FSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTSF
INSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIATM
PASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKRNRELFVAG
LFSLYFVVGLASCTQGGFYFFHLLDRYAAGYSILVAVFFEAIAVSWIYGT
NRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYGLIGYEPLTYADY
VYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFTILTTPWRDQ
QSMAMVLNGVTTEVTVVRLTDTETAKEPVDV*
BS07696.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:56:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DAT-PB | 644 | CG8380-PB | 1..631 | 1..631 | 3334 | 100 | Plus |
DAT-PA | 631 | CG8380-PA | 1..631 | 1..631 | 3334 | 100 | Plus |
SerT-PB | 622 | CG4545-PB | 74..599 | 27..589 | 1551 | 50.8 | Plus |
SerT-PA | 622 | CG4545-PA | 74..599 | 27..589 | 1551 | 50.8 | Plus |
CG1732-PA | 636 | CG1732-PA | 28..608 | 5..593 | 1405 | 45.2 | Plus |