Clone Sequence Records
BS07712.3prime Sequence
750 bp (749 high quality bases) assembled on 2006-01-06
> BS07712.3prime
ATGGTCTAGAAAGCTTTCAGCGCACTAGCTCCGGCAGCAGCTTCTCCTTG
GGCAACCAGCGCTGCCTCAGTTCGTTGTAGCGGCGCCAGATGTAGGGATA
GCCGGCGGCCCAGGAGAGCCAGGCCTCCTTTTCCGCTGTGGTCTGCTCCA
CCTTCTTCAGATGCTGGTAGTACTTCCCGTTCTTCTTAACCGCGGCGGCG
GCATCCTGCACGAATCGGGCGAAGCGGAGCTTGAGCAGGGTCTCCGAGAC
GTCCAGCAGGCGGTTGCCCCTCGGCGGATGGACCAGGCACAGCTGGCAGA
CAACAAAGTCCTGTCCCTTGGCGGATTTAAGGGGCAGAAAGGTGGCCTCG
CGCCCAATGAGACACTGCTGCAGCCAGGAGTAGCCGTTGGCATTGACGCG
CACGCCCGGCAGTTTGACGGGCAGCAGGCGTTTGCTGCTAGTGAAGATCG
GGAAAAGCGGCCGGTGCTGGATCATCAGCAGGGTGTCCTGCTCCTGCTGC
TTGACCCCGGCGATCTTGCCCGTGTGCATGACGCGCTCGTTGATCAGGCG
CTCCGGGATGTGCGAGGGCTGCTTAAACTGGCGCACCAGGTAGGCCGGCT
TCCGTTTGGCATAGGCCACGGCCAGCATGATGGCCGAGGTGCCATAGATG
GCCAGCTCACTGCCGCGCGTATCCCGCTCCAGGAAGTTACATAAGTCCTG
GTACTTGGCCACCGCAAAATCCTTGGCCGCCTCCATGTCGACTGATAACT
BS07712.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30159-PB | 720 | CG30159-RB | 1..720 | 736..17 | 3600 | 100 | Minus |
CG30159-PA | 720 | CG30159-RA | 1..720 | 736..17 | 3600 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 16:07:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30159-RC | 1566 | CG30159-RC | 388..1107 | 736..17 | 3600 | 100 | Minus |
CG30159-RA | 1561 | CG30159-RA | 383..1102 | 736..17 | 3600 | 100 | Minus |
CG30159-RB | 1322 | CG30159-RB | 144..863 | 736..17 | 3600 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 16:07:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6993128..6993847 | 736..17 | 3600 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 16:07:11 has no hits.
BS07712.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:21:14 Download gff for
BS07712.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-PB | 1..720 | 17..736 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:14:17 Download gff for
BS07712.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-PA | 1..720 | 17..736 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:20:47 Download gff for
BS07712.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RB | 136..872 | 8..749 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:40:01 Download gff for
BS07712.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RB | 136..872 | 8..749 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:40:01 Download gff for
BS07712.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6993119..6993856 | 8..750 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:20:47 Download gff for
BS07712.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2880624..2881361 | 8..750 | 98 | | Minus |
BS07712.5prime Sequence
750 bp (749 high quality bases) assembled on 2006-01-06
> BS07712.5prime
GAAGTTATCAGTCGACATGGAGGCGGCCAAGGATTTTGCGGTGGCCAAGT
ACCAGGACTTATGTAACTTCCTGGAGCGGGATACGCGCGGCAGTGAGCTG
GCCATCTATGGCACCTCGGCCATCATGCTGGCCGTGGCCTATGCCAAACG
GAAGCCGGCCTACCTGGTGCGCCAGTTTAAGCAGCCCTCGCACATCCCGG
AGCGCCTGATCAACGAGCGCGTCATGCACACGGGCAAGATCGCCGGGGTC
AAGCAGCAGGAGCAGGACACCCTGCTGATGATCCAGCACCGGCCGCTTTT
CCCGATCTTCACTAGCAGCAAACGCCTGCTGCCCGTCAAACTGCCGGGCG
TGCGCGTCAATGCCAACGGCTACTCCTGGCTGCAGCAGTGTCTCATTGGG
CGCGAGGCCACCTTTCTGCCCCTTAAATCCGCCAAGGGACAGGACTTTGT
TGTCTGCCAGCTGTGCCTGGTCCATCCGCCGAGGGGCAACCGCCTGCTGG
ACGTCTCGGAGACCCTGCTCAAGCTCCGCTTCGCCCGATTCGTGCAGGAT
GCCGCCGCCGCGGTTAAGAAGAACGGGAAGTACTACCAGCATCTGAAGAA
GGTGGAGCAGACCACAGCGGAAAAGGAGGCCTGGCTCTCCTGGGCCGCCG
GCTATCCCTACATCTGGCGCCGCTACAACGAACTGAGGCAGCGCTGGTTG
CCCAAGGAGAAGCTGCTGCCGGAGCTAGTGCGCTGAAAGCTTTCTAGACC
BS07712.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30159-PB | 720 | CG30159-RB | 1..720 | 17..736 | 3600 | 100 | Plus |
CG30159-PA | 720 | CG30159-RA | 1..720 | 17..736 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:17:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30159-RC | 1566 | CG30159-RC | 388..1107 | 17..736 | 3600 | 100 | Plus |
CG30159-RA | 1561 | CG30159-RA | 383..1102 | 17..736 | 3600 | 100 | Plus |
CG30159-RB | 1322 | CG30159-RB | 144..863 | 17..736 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:17:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6993128..6993847 | 17..736 | 3600 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:17:55 has no hits.
BS07712.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:21:15 Download gff for
BS07712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-PB | 1..720 | 17..736 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:14:18 Download gff for
BS07712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-PA | 1..720 | 17..736 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:22:35 Download gff for
BS07712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RB | 136..872 | 4..745 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:55:26 Download gff for
BS07712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RB | 136..872 | 4..745 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:55:26 Download gff for
BS07712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6993119..6993856 | 3..745 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:22:35 Download gff for
BS07712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2880624..2881361 | 3..745 | 98 | | Plus |
BS07712.complete Sequence
752 bp (752 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635959
> BS07712.complete
GAAGTTATCAGTCGACATGGAGGCGGCCAAGGATTTTGCGGTGGCCAAGT
ACCAGGACTTATGTAACTTCCTGGAGCGGGATACGCGCGGCAGTGAGCTG
GCCATCTATGGCACCTCGGCCATCATGCTGGCCGTGGCCTATGCCAAACG
GAAGCCGGCCTACCTGGTGCGCCAGTTTAAGCAGCCCTCGCACATCCCGG
AGCGCCTGATCAACGAGCGCGTCATGCACACGGGCAAGATCGCCGGGGTC
AAGCAGCAGGAGCAGGACACCCTGCTGATGATCCAGCACCGGCCGCTTTT
CCCGATCTTCACTAGCAGCAAACGCCTGCTGCCCGTCAAACTGCCGGGCG
TGCGCGTCAATGCCAACGGCTACTCCTGGCTGCAGCAGTGTCTCATTGGG
CGCGAGGCCACCTTTCTGCCCCTTAAATCCGCCAAGGGACAGGACTTTGT
TGTCTGCCAGCTGTGCCTGGTCCATCCGCCGAGGGGCAACCGCCTGCTGG
ACGTCTCGGAGACCCTGCTCAAGCTCCGCTTCGCCCGATTCGTGCAGGAT
GCCGCCGCCGCGGTTAAGAAGAACGGGAAGTACTACCAGCATCTGAAGAA
GGTGGAGCAGACCACAGCGGAAAAGGAGGCCTGGCTCTCCTGGGCCGCCG
GCTATCCCTACATCTGGCGCCGCTACAACGAACTGAGGCAGCGCTGGTTG
CCCAAGGAGAAGCTGCTGCCGGAGCTAGTGCGCTGAAAGCTTTCTAGACC
AT
BS07712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:15:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30159-RC | 720 | CG30159-PC | 1..720 | 17..736 | 3600 | 100 | Plus |
CG30159-RA | 720 | CG30159-PA | 1..720 | 17..736 | 3600 | 100 | Plus |
CG30159-RB | 720 | CG30159-PB | 1..720 | 17..736 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:15:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30159-RC | 1566 | CG30159-RC | 388..1107 | 17..736 | 3600 | 100 | Plus |
CG30159-RA | 1561 | CG30159-RA | 383..1102 | 17..736 | 3600 | 100 | Plus |
CG30159-RB | 1322 | CG30159-RB | 144..863 | 17..736 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:15:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6993128..6993847 | 17..736 | 3600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:15:55 has no hits.
BS07712.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:01:20 Download gff for
BS07712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RA | 1..720 | 17..736 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:38:34 Download gff for
BS07712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RA | 370..1106 | 4..745 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:23 Download gff for
BS07712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RB | 144..862 | 17..735 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:01:20 Download gff for
BS07712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RA | 370..1106 | 4..745 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:07:00 Download gff for
BS07712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30159-RB | 144..862 | 17..735 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:07:00 Download gff for
BS07712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6993128..6993846 | 17..735 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:23 Download gff for
BS07712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2880633..2881351 | 17..735 | 100 | | Plus |
BS07712.pep Sequence
Translation from 16 to 735
> BS07712.pep
MEAAKDFAVAKYQDLCNFLERDTRGSELAIYGTSAIMLAVAYAKRKPAYL
VRQFKQPSHIPERLINERVMHTGKIAGVKQQEQDTLLMIQHRPLFPIFTS
SKRLLPVKLPGVRVNANGYSWLQQCLIGREATFLPLKSAKGQDFVVCQLC
LVHPPRGNRLLDVSETLLKLRFARFVQDAAAAVKKNGKYYQHLKKVEQTT
AEKEAWLSWAAGYPYIWRRYNELRQRWLPKEKLLPELVR*
BS07712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:38:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30159-PC | 239 | CG30159-PC | 1..239 | 1..239 | 1249 | 100 | Plus |
CG30159-PA | 239 | CG30159-PA | 1..239 | 1..239 | 1249 | 100 | Plus |
CG30159-PB | 239 | CG30159-PB | 1..239 | 1..239 | 1249 | 100 | Plus |