Clone BS07737 Report

Search the DGRC for BS07737

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:77
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG15892-RA
Protein status:BS07737.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07737.3prime Sequence

886 bp (749 high quality bases) assembled on 2006-01-06

> BS07737.3prime
ATGGTCTAGAAAGCTTCTAGTCGCAGTCATAGCGGGTGCACTTCTCAAAG
GCTCCAAGACCCTGCGGCTGGGGCTTCTTGCGACGGCGCTCGTACAGCAG
CTTCTTCTCGGCGGCGCACATGAGCCGACGCTTGATGTGATTGTCCATCT
CGAAGTCCAAGTCGGCCGGCTTGGCCAGCTCGTTGGGATCCCTTGTGGCT
GCCGAGTCCAGCGCCTTAATGATCAAACTGAGCAGCGCGTGCGCGAGGCG
ATGGCACACATCGTACTCGATGGCATCCTGGCTGGTGTAGTAGATGGCCG
ACTGTGAGGTGGGCTGCACACCAATGGCCAACAGGATGTTGCAGAAGATG
CCGCGCTGCATGCGCGCATACGGATCCACCAGCTGCGGCGGAATGCGCAT
CGTTGTGGCCAGATGGGAAATGAATTTGGCGAACTTCTTGATGAGCACGT
TCAGGTACTGGGTGCGGCACTGGCGCTCCAGCTTGGTCAGCATGTTGTAG
TACAGTTCCTGCTTGCGCTTCAGGAAATCCTCCTTCTTTCGCTCCTTGGT
CTTGTTGCTCTTAAGGATCTGCTCCAGCTGTTCCGTGGTAATGGCTTTGT
ATTTGCCCAGCATGCGCTTGATCCGCTTGGCCCGCAGCTTCGGATCGTAT
ACATCCTTGAACTGCTCGTAGTTGTCGATGAGCGTGTGCAACTTGGGCTT
GGACAGGGCCACGTCGTAGGGCTTTACCTTGGGCGGCAGTGTCGGCTGGT
AGGCCATGCGCCGCACATACAACTCCAGCTTGTCCAGTTCCTCCTCCCGC
CGCTTCTTTACGTTCTCCTCTGCGCACACATCCGGATCCTCCTCCTCGGG
CAGCGACTCCGTCGACGTGGGCATCGGCTCATCCCA

BS07737.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-PA 894 CG15892-RA 25..894 886..17 4350 100 Minus
CG15892-PB 894 CG15892-RB 25..894 886..17 4350 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 07:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 1173 CG15892-RA 230..1099 886..17 4350 100 Minus
CG15896-RB 2809 CG15896-RB 1812..2376 17..581 2825 100 Plus
CG15896-RB 2809 CG15896-RB 2442..2746 582..886 1525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 07:53:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6293180..6293744 17..581 2825 100 Plus
X 23542271 X 6293810..6294114 582..886 1525 100 Plus
Blast to na_te.dros performed on 2015-02-01 07:53:32 has no hits.

BS07737.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:22:04 Download gff for BS07737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PA 26..894 17..885 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:15:27 Download gff for BS07737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PB 26..894 17..885 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:18:30 Download gff for BS07737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 231..1099 17..885 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:47:10 Download gff for BS07737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 231..1099 17..885 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:47:10 Download gff for BS07737.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6293180..6293744 17..581 100 <- Plus
X 6293810..6294113 582..885 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:18:30 Download gff for BS07737.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6187843..6188146 582..885 100   Plus
arm_X 6187213..6187777 17..581 100 <- Plus

BS07737.5prime Sequence

864 bp (748 high quality bases) assembled on 2006-01-06

> BS07737.5prime
GAAGTTATCAGTCGACATGGCCAGCTCCAATGTCTCGGATTGGGATGAGC
CGATGCCCACGTCGACGGAGTCGCTGCCCGAGGAGGAGGATCCGGATGTG
TGCGCAGAGGAGAACGTAAAGAAGCGGCGGGAGGAGGAACTGGACAAGCT
GGAGTTGTATGTGCGGCGCATGGCCTACCAGCCGACACTGCCGCCCAAGG
TAAAGCCCTACGACGTGGCCCTGTCCAAGCCCAAGTTGCACACGCTCATC
GACAACTACGAGCAGTTCAAGGATGTATACGATCCGAAGCTGCGGGCCAA
GCGGATCAAGCGCATGCTGGGCAAATACAAAGCCATTACCACGGAACAGC
TGGAGCAGATCCTTAAGAGCAACAAGACCAAGGAGCGAAAGAAGGAGGAT
TTCCTGAAGCGCAAGCAGGAACTGTACTACAACATGCTGACCAAGCTGGA
GCGCCAGTGCCGCACCCAGTACCTGAACGTGCTCATCAAGAAGTTCGCCA
AATTCATTTCCCATCTGGCCACAACGATGCGCATTCCGCCGCAGCTGGTG
GATCCGTATGCGCGCATGCAGCGCGGCATCTTCTGCAACATCCTGTTGGC
CATTGGTGTGCAGCCCACCTCACAGTCGGCCATCTACTACACCAGCCAGG
ATGCCATCGAGTACGATGTGTGCCATCGCCTCGCGCACGCGCTGCTCAGT
TTGATCATTAAGGCGCTGGACTCGGCAGCCACAAGGGATCCCAACGAGCT
GGCCAAGCCGGCCGACTTGGACTTCGAGATGGACAATCACATCAAGCGTC
GGCTCATGTGCGCCGCCGAGAAGAAGCTGCTGTACGAGCGCCGTCGCAAG
AAGCCCCAGCCGCA

BS07737.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-PA 894 CG15892-RA 1..848 17..864 4240 100 Plus
CG15892-PB 894 CG15892-RB 1..848 17..864 4240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 1173 CG15892-RA 205..1053 16..864 4245 100 Plus
CG15896-RB 2809 CG15896-RB 1858..2376 864..346 2595 100 Minus
CG15896-RB 2809 CG15896-RB 2442..2771 345..16 1650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6293226..6293744 864..346 2595 100 Minus
X 23542271 X 6293810..6294139 345..16 1650 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:18:22 has no hits.

BS07737.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:22:05 Download gff for BS07737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PA 1..847 17..863 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:15:29 Download gff for BS07737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PB 1..847 17..863 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:22:39 Download gff for BS07737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 200..1052 8..863 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:55:30 Download gff for BS07737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 200..1052 8..863 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:55:30 Download gff for BS07737.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6293810..6294144 8..345 99   Minus
X 6293227..6293744 346..863 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:22:39 Download gff for BS07737.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6187260..6187777 346..863 100 <- Minus
arm_X 6187843..6188177 8..345 99   Minus

BS07737.complete Sequence

926 bp (926 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635967

> BS07737.complete
GAAGTTATCAGTCGACATGGCCAGCTCCAATGTCTCGGATTGGGATGAGC
CGATGCCCACGTCGACGGAGTCGCTGCCCGAGGAGGAGGATCCGGATGTG
TGCGCAGAGGAGAACGTAAAGAAGCGGCGGGAGGAGGAACTGGACAAGCT
GGAGTTGTATGTGCGGCGCATGGCCTACCAGCCGACACTGCCGCCCAAGG
TAAAGCCCTACGACGTGGCCCTGTCCAAGCCCAAGTTGCACACGCTCATC
GACAACTACGAGCAGTTCAAGGATGTATACGATCCGAAGCTGCGGGCCAA
GCGGATCAAGCGCATGCTGGGCAAATACAAAGCCATTACCACGGAACAGC
TGGAGCAGATCCTTAAGAGCAACAAGACCAAGGAGCGAAAGAAGGAGGAT
TTCCTGAAGCGCAAGCAGGAACTGTACTACAACATGCTGACCAAGCTGGA
GCGCCAGTGCCGCACCCAGTACCTGAACGTGCTCATCAAGAAGTTCGCCA
AATTCATTTCCCATCTGGCCACAACGATGCGCATTCCGCCGCAGCTGGTG
GATCCGTATGCGCGCATGCAGCGCGGCATCTTCTGCAACATCCTGTTGGC
CATTGGTGTGCAGCCCACCTCACAGTCGGCCATCTACTACACCAGCCAGG
ATGCCATCGAGTACGATGTGTGCCATCGCCTCGCGCACGCGCTGCTCAGT
TTGATCATTAAGGCGCTGGACTCGGCAGCCACAAGGGATCCCAACGAGCT
GGCCAAGCCGGCCGACTTGGACTTCGAGATGGACAATCACATCAAGCGTC
GGCTCATGTGCGCCGCCGAGAAGAAGCTGCTGTACGAGCGCCGTCGCAAG
AAGCCCCAGCCGCAGGGTCTTGGAGCCTTTGAGAAGTGCACCCGCTATGA
CTGCGACTAGAAGCTTTCTAGACCAT

BS07737.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 894 CG15892-PA 1..894 17..910 4470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:40:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 1173 CG15892-RA 205..1099 16..910 4475 100 Plus
CG15896-RB 2809 CG15896-RB 1812..2376 910..346 2825 100 Minus
CG15896-RB 2809 CG15896-RB 2442..2771 345..16 1650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:40:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6293180..6293744 910..346 2825 100 Minus
X 23542271 X 6293810..6294139 345..16 1650 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:40:51 has no hits.

BS07737.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:31 Download gff for BS07737.complete
Subject Subject Range Query Range Percent Splice Strand
CG15892-RB 1..894 17..910 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:21 Download gff for BS07737.complete
Subject Subject Range Query Range Percent Splice Strand
CG15891-RA 972..1871 8..910 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:57:19 Download gff for BS07737.complete
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 206..1099 17..910 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:31 Download gff for BS07737.complete
Subject Subject Range Query Range Percent Splice Strand
CG15891-RA 972..1871 8..910 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:37 Download gff for BS07737.complete
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 206..1099 17..910 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:37 Download gff for BS07737.complete
Subject Subject Range Query Range Percent Splice Strand
X 6293180..6293744 346..910 100 <- Minus
X 6293810..6294138 17..345 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:57:19 Download gff for BS07737.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6187213..6187777 346..910 100 <- Minus
arm_X 6187843..6188171 17..345 100   Minus

BS07737.pep Sequence

Translation from 16 to 909

> BS07737.pep
MASSNVSDWDEPMPTSTESLPEEEDPDVCAEENVKKRREEELDKLELYVR
RMAYQPTLPPKVKPYDVALSKPKLHTLIDNYEQFKDVYDPKLRAKRIKRM
LGKYKAITTEQLEQILKSNKTKERKKEDFLKRKQELYYNMLTKLERQCRT
QYLNVLIKKFAKFISHLATTMRIPPQLVDPYARMQRGIFCNILLAIGVQP
TSQSAIYYTSQDAIEYDVCHRLAHALLSLIIKALDSAATRDPNELAKPAD
LDFEMDNHIKRRLMCAAEKKLLYERRRKKPQPQGLGAFEKCTRYDCD*

BS07737.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-PA 297 CG15892-PA 1..297 1..297 1547 100 Plus