Clone BS07745 Report

Search the DGRC for BS07745

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:77
Well:45
Vector:pDNR-Dual
Associated Gene/Transcriptdpr14-RA
Protein status:BS07745.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07745.3prime Sequence

903 bp (812 high quality bases) assembled on 2006-01-06

> BS07745.3prime
ATGGTCTAGAAAGCTTTCATCGTCTTAATTCCCATCCCCATCCCCACACT
TGTCCCAAGCCCAATCCCCGATTCATTCCGGCTACGGAAATCGAACCGGA
GATGCAAACGTACACTAGAAATAACACAACCATTGTGGAGGCGTTGGCCT
TTTGGCGGCTTCCGTTCGCATGCTGCATGGCGGCTGGCTCCTCACCGTTC
AGCACATGCACCACCACCGTCTCCGTAATCTCATTGCCCAGCATGCAGGT
GTAGTTGCCCGTGTCCTGGCGATTGGCATTGGCGATATACAGGCGACTCA
GAGCTCGTCCTGGCAGCATGTCCGTCTTGACACTGATTCCTCCGCGACTA
GTATCGTAGTTGAGCAGGCGCGGTCCGTGCCGCCAGGTGATATAGGAGGA
GGGATGCGGAATCTTCGAAATGACGCACTGCAGCTCGATGGTGCTGCCAG
CCTTGTAGTACTTCTCCGGCGTGGCCGAGCCCCGCTCGTCGAGTATCTCC
ACGTGAGGAACAATTATAGTAAGGTAAACGAGCAGGACGAGCGGCGGATG
CGAGGACACCTGGCACTCGTAGGGACCCTCGTCCCGCTCGTTGGCGAACT
GGATGAGCAGCTTCCAATCGTTGGGCTCCTCGAACTCCAGCGAATACCGC
GAGTCGCCGCTATATGTGTGCTGGCCAAAGGTTATCAGGGTGAGATCATC
GCCACGGCGACGCATCCAGGACACCGTCTTGCCCTGCAGATCGTTCACCC
GGCAGTGCAGATAAACGCTGGACGAGAGCTGGGTGCTGATGTTCAGCGTG
GTGTACGGATCGGCGAAGAACGGGAACGGCTCGTGGGTGGTCGTCTCGGT
GACCTCCAGCTCCTCATCCTCGGGCGTGTCGGTGAACGGCGATGAGAACT
CCT

BS07745.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG10946-PA 1023 dpr14-RA 137..1023 903..17 4435 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 3794 CG10946-RB 796..1682 903..17 4435 100 Minus
dpr14-RA 1668 CG10946-RA 613..1499 903..17 4435 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7906500..7906892 511..903 1965 100 Plus
X 23542271 X 7905816..7905995 17..196 900 100 Plus
X 23542271 X 7906249..7906427 333..511 895 100 Plus
X 23542271 X 7906043..7906184 194..335 710 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:04:29 has no hits.

BS07745.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:22:20 Download gff for BS07745.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-PA 137..1023 17..903 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:15:51 Download gff for BS07745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10946-PA 137..1023 17..903 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:39:08 Download gff for BS07745.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 613..1499 17..903 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:11:43 Download gff for BS07745.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 613..1499 17..903 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:11:43 Download gff for BS07745.3prime
Subject Subject Range Query Range Percent Splice Strand
X 7905816..7905994 17..195 100 <- Plus
X 7906045..7906181 196..332 100 <- Plus
X 7906249..7906426 333..510 100 <- Plus
X 7906500..7906892 511..903 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:39:08 Download gff for BS07745.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7799849..7800027 17..195 100 <- Plus
arm_X 7800078..7800214 196..332 100 <- Plus
arm_X 7800282..7800459 333..510 100 <- Plus
arm_X 7800533..7800925 511..903 100   Plus

BS07745.5prime Sequence

859 bp (836 high quality bases) assembled on 2006-01-09

> BS07745.5prime
GAAGTTATCAGTCGACATGAGATCGAGGCTGTTTTGGATACTGGCGATTA
TATACTCCTCACTCCATCACATCGGCTCGGGTTCCACGTCGACCACATTG
AAACGACCGCGAGCTGGCGATCCATTCGACACGTTTCCGAAGAACTTCTG
GCAGGAGTTCTCATCGCCGTTCACCGACACGCCCGAGGATGAGGAGCTGG
AGGTCACCGAGACGACCACCCACGAGCCGTTCCCGTTCTTCGCCGATCCG
TACACCACGCTGAACATCAGCACCCAGCTCTCGTCCAGCGTTTATCTGCA
CTGCCGGGTGAACGATCTGCAGGGCAAGACGGTGTCCTGGATGCGTCGCC
GTGGCGATGATCTCACCCTGATAACCTTTGGCCAGCACACATATAGCGGC
GACTCGCGGTATTCGCTGGAGTTCGAGGAGCCCAACGATTGGAAGCTGCT
CATCCAGTTCGCCAACGAGCGGGACGAGGGTCCCTACGAGTGCCAGGTGT
CCTCGCATCCGCCGCTCGTCCTGCTCGTTTACCTTACTATAATTGTTCCT
CACGTGGAGATACTCGACGAGCGGGGCTCGGCCACGCCGGAGAAGTACTA
CAAGGCTGGCAGCACCATCGAGCTGCAGTGCGTCATTTCGAAGATTCCGC
ATCCCTCCTCCTATATCACCTGGCGGCACGGACCGCGCCTGCTCAACTAC
GATACTAGTCGCGGAGGAATCAGTGTCAAGACGGACATGCTGCCAGGACG
AGCTCTGAGTCGCCTGTATATCGCCAATGCCAATCGCCAGGACACGGGCA
ACTACACCTGCATGCTGGGCAATGAGATTACGGAGACGGTGGTGGTGCAT
GTGCTGAAC

BS07745.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG10946-PA 1023 dpr14-RA 1..843 17..859 4215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 3794 CG10946-RB 660..1502 17..859 4215 100 Plus
dpr14-RA 1668 CG10946-RA 477..1319 17..859 4215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:55:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7906500..7906946 545..99 2235 100 Minus
X 23542271 X 7906249..7906427 723..545 895 100 Minus
X 23542271 X 7906046..7906184 859..721 695 100 Minus
X 23542271 X 7907257..7907338 98..17 410 100 Minus
Blast to na_te.dros performed on 2015-02-11 10:55:40 has no hits.

BS07745.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:22:21 Download gff for BS07745.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-PA 1..843 17..859 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:15:52 Download gff for BS07745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10946-PA 1..843 17..859 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:01:45 Download gff for BS07745.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 472..1319 9..859 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:28:56 Download gff for BS07745.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 472..1319 9..859 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:28:56 Download gff for BS07745.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7906046..7906181 724..859 100 <- Minus
X 7906249..7906426 546..723 100 <- Minus
X 7906500..7906946 99..545 100 <- Minus
X 7907257..7907343 9..98 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:01:45 Download gff for BS07745.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7800079..7800214 724..859 100 <- Minus
arm_X 7800282..7800459 546..723 100 <- Minus
arm_X 7800533..7800979 99..545 100 <- Minus
arm_X 7801290..7801376 9..98 96   Minus

BS07745.complete Sequence

1055 bp (1055 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635970

> BS07745.complete
GAAGTTATCAGTCGACATGAGATCGAGGCTGTTTTGGATACTGGCGATTA
TATACTCCTCACTCCATCACATCGGCTCGGGTTCCACGTCGACCACATTG
AAACGACCGCGAGCTGGCGATCCATTCGACACGTTTCCGAAGAACTTCTG
GCAGGAGTTCTCATCGCCGTTCACCGACACGCCCGAGGATGAGGAGCTGG
AGGTCACCGAGACGACCACCCACGAGCCGTTCCCGTTCTTCGCCGATCCG
TACACCACGCTGAACATCAGCACCCAGCTCTCGTCCAGCGTTTATCTGCA
CTGCCGGGTGAACGATCTGCAGGGCAAGACGGTGTCCTGGATGCGTCGCC
GTGGCGATGATCTCACCCTGATAACCTTTGGCCAGCACACATATAGCGGC
GACTCGCGGTATTCGCTGGAGTTCGAGGAGCCCAACGATTGGAAGCTGCT
CATCCAGTTCGCCAACGAGCGGGACGAGGGTCCCTACGAGTGCCAGGTGT
CCTCGCATCCGCCGCTCGTCCTGCTCGTTTACCTTACTATAATTGTTCCT
CACGTGGAGATACTCGACGAGCGGGGCTCGGCCACGCCGGAGAAGTACTA
CAAGGCTGGCAGCACCATCGAGCTGCAGTGCGTCATTTCGAAGATTCCGC
ATCCCTCCTCCTATATCACCTGGCGGCACGGACCGCGCCTGCTCAACTAC
GATACTAGTCGCGGAGGAATCAGTGTCAAGACGGACATGCTGCCAGGACG
AGCTCTGAGTCGCCTGTATATCGCCAATGCCAATCGCCAGGACACGGGCA
ACTACACCTGCATGCTGGGCAATGAGATTACGGAGACGGTGGTGGTGCAT
GTGCTGAACGGTGAGGAGCCAGCCGCCATGCAGCATGCGAACGGAAGCCG
CCAAAAGGCCAACGCCTCCACAATGGTTGTGTTATTTCTAGTGTACGTTT
GCATCTCCGGTTCGATTTCCGTAGCCGGAATGAATCGGGGATTGGGCTTG
GGACAAGTGTGGGGATGGGGATGGGAATTAAGACGATGAAAGCTTTCTAG
ACCAT

BS07745.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 1023 CG10946-PB 1..1023 17..1039 5115 100 Plus
dpr14-RA 1023 CG10946-PA 1..1023 17..1039 5115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:22:24
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 3794 CG10946-RB 660..1682 17..1039 5115 100 Plus
dpr14-RA 1668 CG10946-RA 477..1499 17..1039 5115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7906500..7906946 545..99 2235 100 Minus
X 23542271 X 7905816..7905995 1039..860 900 100 Minus
X 23542271 X 7906249..7906427 723..545 895 100 Minus
X 23542271 X 7906043..7906184 862..721 710 100 Minus
X 23542271 X 7907257..7907338 98..17 410 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:22:21 has no hits.

BS07745.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:55 Download gff for BS07745.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 1..1023 17..1039 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:32:10 Download gff for BS07745.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 439..1466 9..1039 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:50:57 Download gff for BS07745.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 477..1498 17..1038 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:55 Download gff for BS07745.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 439..1466 9..1039 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:19:17 Download gff for BS07745.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 477..1498 17..1038 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:19:17 Download gff for BS07745.complete
Subject Subject Range Query Range Percent Splice Strand
X 7906045..7906181 724..860 100 <- Minus
X 7906249..7906426 546..723 100 <- Minus
X 7905817..7905994 861..1038 100 <- Minus
X 7906500..7906946 99..545 100 <- Minus
X 7907257..7907338 17..98 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:50:57 Download gff for BS07745.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7800078..7800214 724..860 100 <- Minus
arm_X 7800282..7800459 546..723 100 <- Minus
arm_X 7799850..7800027 861..1038 100 <- Minus
arm_X 7800533..7800979 99..545 100 <- Minus
arm_X 7801290..7801371 17..98 100   Minus

BS07745.pep Sequence

Translation from 16 to 1038

> BS07745.pep
MRSRLFWILAIIYSSLHHIGSGSTSTTLKRPRAGDPFDTFPKNFWQEFSS
PFTDTPEDEELEVTETTTHEPFPFFADPYTTLNISTQLSSSVYLHCRVND
LQGKTVSWMRRRGDDLTLITFGQHTYSGDSRYSLEFEEPNDWKLLIQFAN
ERDEGPYECQVSSHPPLVLLVYLTIIVPHVEILDERGSATPEKYYKAGST
IELQCVISKIPHPSSYITWRHGPRLLNYDTSRGGISVKTDMLPGRALSRL
YIANANRQDTGNYTCMLGNEITETVVVHVLNGEEPAAMQHANGSRQKANA
STMVVLFLVYVCISGSISVAGMNRGLGLGQVWGWGWELRR*

BS07745.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-PB 340 CG10946-PB 1..340 1..340 1816 100 Plus
dpr14-PA 340 CG10946-PA 1..340 1..340 1816 100 Plus
dpr20-PA 525 CG12191-PA 278..520 83..317 527 41.6 Plus
dpr6-PC 390 CG14162-PC 62..305 64..314 441 40.2 Plus
dpr6-PF 396 CG14162-PF 62..311 64..314 424 39.2 Plus