Clone Sequence Records
BS07751.3prime Sequence
797 bp (744 high quality bases) assembled on 2006-01-06
> BS07751.3prime
ATGGTCTAGAAAGCTTCTAGCACTTTTTCTTATTGTTCTTTTTTCCTGCC
TTTTTGTCTGCTTCATTGATGAATTTGCAGATCTCGATGGAGGAAAATGA
CTTTGGTCTTTCAATTGGGGCTCCCAAAGCCCTGGACCAAATCAGCTGGG
ACAGAACTCCAAGCGCCCGAGAAACTCCGAAAAGAACTGTGTAGAACTTC
AGCTCCTTCAGACAGTAATGTTGCAGCAGGACGCCCGAATGGGCATCGAC
GTTTGGATACGGATTCGCTACCTTGTTGAGCTTCTTGAGCACCTCTGGTA
TGATCTTCCACAGGCGGGTCACCAGCTTTACGCCTGGATCATCCTTGCAG
TGCTTCATGGCAAACTCGTTTTGCAGGACGAACCGAGGATCGGTGTCCCG
AAGGACAGCGTGTCCGTAGCCGGGAATGACCTGGCCCCCTTTCAGCGTAT
CATCGATGAACTTCTTTAGCTCTTCATCGGAGGGGTCATCGCCAATGGCC
TTCCTAAGCTTTGTCAGCCAAACCAGCACTTCCTGATTGGCCAAACCATG
AAGTGGCCCAGCCAGGCCGCACATGCTGGCCGAGAAAGACAGGAAGGGAT
CGCTGAGCGCCGTTCCGACTAGGTGGCAAGCATGGGCGGAAACATTGCCG
CTCTCATGATCTGCATGCAGGATCATGTAGAGCCGCATAAGATCAACGAA
ATCCTTTTCGGGTAGTCCAAGCATGCGGCAGAAGTTGCCGGACCAGTCCT
CCTCATAGTTGACCTCCCGTGAACCTTCGCCATCCCTAACACGTTAG
BS07751.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14740-PA | 1437 | CG14740-RA | 665..1437 | 789..17 | 3865 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14740-RA | 1600 | CG14740-RA | 754..1536 | 797..16 | 3890 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:53:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12061191..12061609 | 16..434 | 2095 | 100 | Plus |
3R | 32079331 | 3R | 12061705..12062065 | 429..789 | 1805 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:53:57 has no hits.
BS07751.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:22:34 Download gff for
BS07751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-PA | 656..1437 | 17..797 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:16:09 Download gff for
BS07751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-PA | 656..1437 | 17..797 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:58:23 Download gff for
BS07751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 754..1536 | 16..797 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:01:25 Download gff for
BS07751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 754..1536 | 16..797 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:01:25 Download gff for
BS07751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12061191..12061605 | 16..430 | 100 | <- | Plus |
3R | 12061707..12062074 | 431..797 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:58:23 Download gff for
BS07751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7886913..7887327 | 16..430 | 100 | <- | Plus |
arm_3R | 7887429..7887796 | 431..797 | 99 | | Plus |
BS07751.5prime Sequence
830 bp (715 high quality bases) assembled on 2006-01-06
> BS07751.5prime
GAAGTTATCAGTCGACATGCAAAAAACCAATAACTACAAAAGCTTCAAAA
TCTTCTTCAAGAACGTTCCATTTCGTTCATATCCCGACTGCAAGAATGGT
AAAGGTTCAGGCCTAAAAGCCAAGTTGGCAAAGAAAATTCCTATAGAACG
TGAAAAGTTTTTGGGTATAAAGTGTCTGCACGGCAAGAAGATAATTGGCC
AGATCAGTGTTAATAGCGTGATTGGAGGAATGCGAGGACTTCCACTTTTG
TTTTGCGAGACATCCAGCTTGGACAAAAACAAGGGTATTTATTACCGTGG
AAAACTGCTTAAGGATGTGTGTGCCAAACTGCCACGGGTGCAAGAGGGCA
CACAAGAGGGCACTCCCGAAGGATGTTTCTTCCTGCTGACCAGCGGATCG
ATGCCCACGAAGAAGGAGGCACAGGAAGTGACCAACGAGTGGCTGAAGCG
GGGCTCAGTTCCGCGCTACTGCCTCCGGATGATCGACTCCATGGACAAGC
GGGTGCATCCGATGGCCCAATTGTGCGCCGCCAGTGCCTGTCTCAATCCG
CAGAGCCAGTTCGTCGAGGCTTACACCAAAGGGGCCAGACGTGCAGACTA
CTGGAAATACTCCTACGAGGATTCAATGAACCTCATCGCCATGCTGCCCA
CCGTGGCGGCTGCCATCTATTCTAACGTGTTTAGGGATGGCGAAGGTTCA
CGGGAGGTCAACTATGAGGAGGACTGGTCCGGCAACTTCTGCCGCATGCT
TGGACTACCCGAAAAGGATTTCGTTGATCTTATGCGGCTCTACATGATCC
TGCATGCAGATCATGAGAGCGGCAATGTTT
BS07751.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14740-PA | 1437 | CG14740-RA | 1..814 | 17..830 | 4070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:16:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14740-RA | 1600 | CG14740-RA | 99..912 | 17..830 | 4070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:16:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12061916..12062482 | 830..264 | 2835 | 100 | Minus |
3R | 32079331 | 3R | 12062549..12062756 | 267..60 | 1040 | 100 | Minus |
3R | 32079331 | 3R | 12062802..12062846 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 12:16:40 has no hits.
BS07751.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:22:35 Download gff for
BS07751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-PA | 1..814 | 17..830 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:16:10 Download gff for
BS07751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-PA | 1..814 | 17..830 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:58:39 Download gff for
BS07751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 90..912 | 8..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:14:52 Download gff for
BS07751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 90..912 | 8..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:14:52 Download gff for
BS07751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12062549..12062754 | 62..267 | 100 | <- | Minus |
3R | 12062802..12062855 | 8..61 | 92 | | Minus |
3R | 12061916..12062478 | 268..830 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:58:39 Download gff for
BS07751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7887638..7888200 | 268..830 | 100 | <- | Minus |
arm_3R | 7888271..7888476 | 62..267 | 100 | <- | Minus |
arm_3R | 7888524..7888577 | 8..61 | 92 | | Minus |
BS07751.complete Sequence
1469 bp (1469 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635972
> BS07751.complete
GAAGTTATCAGTCGACATGCAAAAAACCAATAACTACAAAAGCTTCAAAA
TCTTCTTCAAGAACGTTCCATTTCGTTCATATCCCGACTGCAAGAATGGT
AAAGGTTCAGGCCTAAAAGCCAAGTTGGCAAAGAAAATTCCTATAGAACG
TGAAAAGTTTTTGGGTATAAAGTGTCTGCACGGCAAGAAGATAATTGGCC
AGATCAGTGTTAATAGCGTGATTGGAGGAATGCGAGGACTTCCACTTTTG
TTTTGCGAGACATCCAGCTTGGACAAAAACAAGGGTATTTATTACCGTGG
AAAACTGCTTAAGGATGTGTGTGCCAAACTGCCACGGGTGCAAGAGGGCA
CACAAGAGGGCACTCCCGAAGGATGTTTCTTCCTGCTGACCAGCGGATCG
ATGCCCACGAAGAAGGAGGCACAGGAAGTGACCAACGAGTGGCTGAAGCG
GGGCTCAGTTCCGCGCTACTGCCTCCGGATGATCGACTCCATGGACAAGC
GGGTGCATCCGATGGCCCAATTGTGCGCCGCCAGTGCCTGTCTCAATCCG
CAGAGCCAGTTCGTCGAGGCTTACACCAAAGGGGCCAGACGTGCAGACTA
CTGGAAATACTCCTACGAGGATTCAATGAACCTCATCGCCATGCTGCCCA
CCGTGGCGGCTGCCATCTATTCTAACGTGTTTAGGGATGGCGAAGGTTCA
CGGGAGGTCAACTATGAGGAGGACTGGTCCGGCAACTTCTGCCGCATGCT
TGGACTACCCGAAAAGGATTTCGTTGATCTTATGCGGCTCTACATGATCC
TGCATGCAGATCATGAGAGCGGCAATGTTTCCGCCCATGCTTGCCACCTA
GTCGGAACGGCGCTCAGCGATCCCTTCCTGTCTTTCTCGGCCAGCATGTG
CGGCCTGGCTGGGCCACTTCATGGTTTGGCCAATCAGGAAGTGCTGGTTT
GGCTGACAAAGCTTAGGAAGGCCATTGGCGATGACCCCTCCGATGAAGAG
CTAAAGAAGTTCATCGATGATACGCTGAAAGGGGGCCAGGTCATTCCCGG
CTACGGACACGCTGTCCTTCGGGACACCGATCCTCGGTTCGTCCTGCAAA
ACGAGTTTGCCATGAAGCACTGCAAGGATGATCCAGGCGTAAAGCTGGTG
ACCCGCCTGTGGAAGATCATACCAGAGGTGCTCAAGAAGCTCAACAAGGT
AGCGAATCCGTATCCAAACGTCGATGCCCATTCGGGCGTCCTGCTGCAAC
ATTACTGTCTGAAGGAGCTGAAGTTCTACACAGTTCTTTTCGGAGTTTCT
CGGGCGCTTGGAGTTCTGTCCCAGCTGATTTGGTCCAGGGCTTTGGGAGC
CCCAATTGAAAGACCAAAGTCATTTTCCTCCATCGAGATCTGCAAATTCA
TCAATGAAGCAGACAAAAAGGCAGGAAAAAAGAACAATAAGAAAAAGTGC
TAGAAGCTTTCTAGACCAT
BS07751.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:59:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14740-RA | 1437 | CG14740-PA | 1..1437 | 17..1453 | 7185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:59:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14740-RA | 1600 | CG14740-RA | 99..1536 | 17..1454 | 7190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12061705..12062482 | 1041..264 | 3890 | 100 | Minus |
3R | 32079331 | 3R | 12061191..12061609 | 1454..1036 | 2095 | 100 | Minus |
3R | 32079331 | 3R | 12062549..12062756 | 267..60 | 1040 | 100 | Minus |
3R | 32079331 | 3R | 12062802..12062846 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:59:44 has no hits.
BS07751.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:25 Download gff for
BS07751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 1..1437 | 17..1453 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:12 Download gff for
BS07751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 90..1536 | 8..1454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:04:08 Download gff for
BS07751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 99..1535 | 17..1453 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:25 Download gff for
BS07751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 90..1536 | 8..1454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:38 Download gff for
BS07751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14740-RA | 99..1535 | 17..1453 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:38 Download gff for
BS07751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12061192..12061605 | 1040..1453 | 100 | <- | Minus |
3R | 12061707..12062478 | 268..1039 | 100 | <- | Minus |
3R | 12062549..12062754 | 62..267 | 100 | <- | Minus |
3R | 12062802..12062846 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:08 Download gff for
BS07751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7886914..7887327 | 1040..1453 | 100 | <- | Minus |
arm_3R | 7887429..7888200 | 268..1039 | 100 | <- | Minus |
arm_3R | 7888271..7888476 | 62..267 | 100 | <- | Minus |
arm_3R | 7888524..7888568 | 17..61 | 100 | | Minus |
BS07751.pep Sequence
Translation from 16 to 1452
> BS07751.pep
MQKTNNYKSFKIFFKNVPFRSYPDCKNGKGSGLKAKLAKKIPIEREKFLG
IKCLHGKKIIGQISVNSVIGGMRGLPLLFCETSSLDKNKGIYYRGKLLKD
VCAKLPRVQEGTQEGTPEGCFFLLTSGSMPTKKEAQEVTNEWLKRGSVPR
YCLRMIDSMDKRVHPMAQLCAASACLNPQSQFVEAYTKGARRADYWKYSY
EDSMNLIAMLPTVAAAIYSNVFRDGEGSREVNYEEDWSGNFCRMLGLPEK
DFVDLMRLYMILHADHESGNVSAHACHLVGTALSDPFLSFSASMCGLAGP
LHGLANQEVLVWLTKLRKAIGDDPSDEELKKFIDDTLKGGQVIPGYGHAV
LRDTDPRFVLQNEFAMKHCKDDPGVKLVTRLWKIIPEVLKKLNKVANPYP
NVDAHSGVLLQHYCLKELKFYTVLFGVSRALGVLSQLIWSRALGAPIERP
KSFSSIEICKFINEADKKAGKKNNKKKC*
BS07751.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14740-PA | 478 | CG14740-PA | 1..478 | 1..478 | 2534 | 100 | Plus |
kdn-PA | 464 | CG3861-PA | 31..464 | 30..464 | 1248 | 52.6 | Plus |
kdn-PB | 522 | CG3861-PB | 89..522 | 30..464 | 1248 | 52.6 | Plus |