Clone BS07764 Report

Search the DGRC for BS07764

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:77
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG10494-RB
Protein status:BS07764.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07764.3prime Sequence

916 bp (819 high quality bases) assembled on 2006-01-06

> BS07764.3prime
ATGGTCTAGAAAGCTTTTACTTCGGTTGCAGCATTTCGCTGATCCTGCGC
AGGGTCTCCTCTCGATCTCGATGCATCAGTTCCGATACTTGTTCCAAAAA
TTGATGCTGCTGCTCGCGTTGCTGCCGCAAGAAGCTTTCGTTGGTAGTTT
TGATCTGCGCAAGCAGCTGCTTTTGACCTTCTATGATTGCAGTGAGTGCT
TCAATCGGCGTTGGTTCAGCCTCCATCTCGATGGCGTCCACGTAGTCCTC
GCTATCGGCTGCCGCTCTTAGGAGATCGCAGGTGGAGCTGGAGTTGTCGC
TGTCACTTTCCAGCGGAACGCTTGGTTTGCCTGGCGGCTTGAGAAAGGAA
GGCTTGCTGATGCGAATGAGCCTGCTGATGGCACTTTCTCTGTTCTCCCG
CGGCGCCTGAATCAGTTCATCGAAAAGCTCAAAGTGGCGAGGCAGAATGC
GTACATTATCTAGCCCGTGCTCCTTGGCCTCTCGATGACGCTTGCAGAGC
AGCCTTAGTTTATTGCGCAGCTGGTGTGGCGTGCGTTTGATGTCCTGCTT
AGCCAGGATGTTGGAAATGTGCACCAGGGTCTGGAAGTTGCGCTTCCTTG
AGCCATCCAAGGCGCGAAAGAAACCATTGTCCCGAATGATGAGTAGAAAC
GAATCAACCTCTTCGTCTGTCCAAAAGTGCGCTCCGCTTCTCTGTGATGC
ATCACCCTCTTCCTCGTCACTGTCATTGAAATCACTATCGCTTGCGCTGC
TCAGATGGGCTTCCGCTTCAGCATCTGCGGCCGCCTCCTCTTCGGTGGGA
TCCAGGACCAGTCGCATCGCCTCAAAATGCTCGAACGTTTTCCCCGTGCC
GTTCTTGACCTTGTTGTACAATCGCCGCAGCTGCTGGAACTTGATGCGCA
GCTTCTCAGCACCCTT

BS07764.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10494-PB 1335 CG10494-RB 436..1335 916..17 4500 100 Minus
CG10494-PA 1572 CG10494-RA 673..1572 916..17 4500 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:01:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG10494-RA 1794 CG10494-RA 793..1692 916..17 4500 100 Minus
CG10494-RB 2160 CG10494-RB 778..1677 916..17 4500 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21517257..21517923 17..683 3335 100 Plus
2R 25286936 2R 21517981..21518215 682..916 1175 100 Plus
Blast to na_te.dros performed on 2015-02-12 19:01:22 has no hits.

BS07764.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:02 Download gff for BS07764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-PA 673..1572 17..916 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:16:48 Download gff for BS07764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-PA 673..1572 17..916 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:51:26 Download gff for BS07764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-RB 778..1677 17..916 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:44:04 Download gff for BS07764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-RB 778..1677 17..916 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:44:04 Download gff for BS07764.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21517981..21518215 682..916 100   Plus
2R 21517257..21517921 17..681 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:51:26 Download gff for BS07764.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17404762..17405426 17..681 100 <- Plus
arm_2R 17405486..17405720 682..916 100   Plus

BS07764.5prime Sequence

947 bp (815 high quality bases) assembled on 2006-01-06

> BS07764.5prime
GAAGTTATCAGTCGACATGGTGTCCAGAGAAATGGCCCGGCGGAACTGCC
CCAAGAGTCCAAAGCATCTGAGAGTCAAGTTCCATCAGATGCGGCGTCAG
TATGCGAGAGCTCGGAATGGCGGCGAACCATTCGAGCACTTTGAGGCGGT
GCACGAGTTGATGCAGGGAGAAGATGTATCTGATCTGGATGAAGAGGCGC
TAGAGAGTGACAGCGATATGGAGGCCGACGAGGACCAGTCCGGCATGATC
TCAGAAACCGAAGGGGACGATGCTTTGGATGCCTCAGGATCTTCAGTTAA
CATCGTCGCCCGCTGCAAGTGGGCAGAGGGCGAAGTGGACCTCCTCCTAG
ACCTGATCCACACACTTGGACTGCGAGCAGCTTTGCTGCAAAAGCGCAAT
GCCAAGGTCTTCAAGCTGCTGTCCAAGGAGATGGCAAAACGCAACTGCCA
CAAGGGTGCTGAGAAGCTGCGCATCAAGTTCCAGCAGCTGCGGCGATTGT
ACAACAAGGTCAAGAACGGCACGGGGAAAACGTTCGAGCATTTTGAGGCG
ATGCGACTGGTCCTGGATCCCACCGAAGAGGAGGCGGCCGCAGATGCTGA
AGCGGAAGCCCATCTGAGCAGCGCAAGCGATAGTGATTTCAATGACAGTG
ACGAGGAAGAGGGTGATGCATCACAGAGAAGCGGAGCGCACTTTTGGACA
GACGAAGAGGTTGATTCGTTTCTACTCATCATTCGGGACAATGGTTTCTT
TCGCGCCTTGGATGGCTCAAGGAAGCGCAACTTCCAGACCCTGGTGCACA
TTTCCAACATCCTGGCTAAGCAGGACATCAAACGCACGCCACACCAGCTG
CGCAATAAACTAAGGCTGCTCTGCAAGCGTCATCGAGAGGCCAAGGAGCA
CGGGCTAGATAATGTACGCATTCTGCCCTCGCACTTTGAGCTTTTCG

BS07764.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10494-PB 1335 CG10494-RB 1..911 17..927 4555 100 Plus
CG10494-PA 1572 CG10494-RA 238..1148 17..927 4555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10494-RA 1794 CG10494-RA 358..1288 17..947 4610 99.8 Plus
CG10494-RB 2160 CG10494-RB 343..1273 17..947 4610 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21517981..21518398 686..269 2090 100 Minus
2R 25286936 2R 21518457..21518709 269..17 1265 100 Minus
2R 25286936 2R 21517661..21517923 947..685 1255 98.5 Minus
Blast to na_te.dros performed on 2015-02-12 05:55:27 has no hits.

BS07764.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:03 Download gff for BS07764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-PA 234..1168 12..947 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:16:49 Download gff for BS07764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-PA 234..1168 12..947 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:59:59 Download gff for BS07764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-RB 339..1273 12..947 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:50:43 Download gff for BS07764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10494-RB 339..1273 12..947 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:50:43 Download gff for BS07764.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21517661..21517921 687..947 99 <- Minus
2R 21517981..21518397 270..686 100 <- Minus
2R 21518457..21518713 12..269 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:59:59 Download gff for BS07764.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17405166..17405426 687..947 99 <- Minus
arm_2R 17405486..17405902 270..686 100 <- Minus
arm_2R 17405962..17406218 12..269 99   Minus

BS07764.complete Sequence

1367 bp (1367 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635976

> BS07764.complete
GAAGTTATCAGTCGACATGGTGTCCAGAGAAATGGCCCGGCGGAACTGCC
CCAAGAGTCCAAAGCATCTGAGAGTCAAGTTCCATCAGATGCGGCGTCAG
TATGCGAGAGCTCGGAATGGCGGCGAACCATTCGAGCACTTTGAGGCGGT
GCACGAGTTGATGCAGGGAGAAGATGTATCTGATCTGGATGAAGAGGCGC
TAGAGAGTGACAGCGATATGGAGGCCGACGAGGACCAGTCCGGCATGATC
TCAGAAACCGAAGGGGACGATGCTTTGGATGCCTCAGGATCTTCAGTTAA
CATCGTCGCCCGCTGCAAGTGGGCAGAGGGCGAAGTGGACCTCCTCCTAG
ACCTGATCCACACACTTGGACTGCGAGCAGCTTTGCTGCAAAAGCGCAAT
GCCAAGGTCTTCAAGCTGCTGTCCAAGGAGATGGCAAAACGCAACTGCCA
CAAGGGTGCTGAGAAGCTGCGCATCAAGTTCCAGCAGCTGCGGCGATTGT
ACAACAAGGTCAAGAACGGCACGGGGAAAACGTTCGAGCATTTTGAGGCG
ATGCGACTGGTCCTGGATCCCACCGAAGAGGAGGCGGCCGCAGATGCTGA
AGCGGAAGCCCATCTGAGCAGCGCAAGCGATAGTGATTTCAATGACAGTG
ACGAGGAAGAGGGTGATGCATCACAGAGAAGCGGAGCGCACTTTTGGACA
GACGAAGAGGTTGATTCGTTTCTACTCATCATTCGGGACAATGGTTTCTT
TCGCGCCTTGGATGGCTCAAGGAAGCGCAACTTCCAGACCCTGGTGCACA
TTTCCAACATCCTGGCTAAGCAGGACATCAAACGCACGCCACACCAGCTG
CGCAATAAACTAAGGCTGCTCTGCAAGCGTCATCGAGAGGCCAAGGAGCA
CGGGCTAGATAATGTACGCATTCTGCCTCGCCACTTTGAGCTTTTCGATG
AACTGATTCAGGCGCCGCGGGAGAACAGAGAAAGTGCCATCAGCAGGCTC
ATTCGCATCAGCAAGCCTTCCTTTCTCAAGCCGCCAGGCAAACCAAGCGT
TCCGCTGGAAAGTGACAGCGACAACTCCAGCTCCACCTGCGATCTCCTAA
GAGCGGCAGCCGATAGCGAGGACTACGTGGACGCCATCGAGATGGAGGCT
GAACCAACGCCGATTGAAGCACTCACTGCAATCATAGAAGGTCAAAAGCA
GCTGCTTGCGCAGATCAAAACTACCAACGAAAGCTTCTTGCGGCAGCAAC
GCGAGCAGCAGCATCAATTTTTGGAACAAGTATCGGAACTGATGCATCGA
GATCGAGAGGAGACCCTGCGCAGGATCAGCGAAATGCTGCAACCGAAGTA
AAAGCTTTCTAGACCAT

BS07764.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10494-RA 1572 CG10494-PA 238..1572 17..1351 6675 100 Plus
CG10494-RB 1335 CG10494-PB 1..1335 17..1351 6675 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG10494-RA 1794 CG10494-RA 358..1692 17..1351 6675 100 Plus
CG10494-RB 2160 CG10494-RB 343..1677 17..1351 6675 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21517257..21517923 1351..685 3335 100 Minus
2R 25286936 2R 21517981..21518398 686..269 2090 100 Minus
2R 25286936 2R 21518457..21518709 269..17 1265 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:10:39 has no hits.

BS07764.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:17 Download gff for BS07764.complete
Subject Subject Range Query Range Percent Splice Strand
CG10494-RA 234..1572 12..1351 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:45:02 Download gff for BS07764.complete
Subject Subject Range Query Range Percent Splice Strand
CG10494-RA 335..1673 12..1351 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:41:14 Download gff for BS07764.complete
Subject Subject Range Query Range Percent Splice Strand
CG10494-RB 343..1675 17..1349 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:17 Download gff for BS07764.complete
Subject Subject Range Query Range Percent Splice Strand
CG10494-RA 335..1673 12..1351 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:46:36 Download gff for BS07764.complete
Subject Subject Range Query Range Percent Splice Strand
CG10494-RB 343..1675 17..1349 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:36 Download gff for BS07764.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21518457..21518709 17..269 100   Minus
2R 21517259..21517921 687..1349 100 <- Minus
2R 21517981..21518397 270..686 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:41:14 Download gff for BS07764.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17405962..17406214 17..269 100   Minus
arm_2R 17404764..17405426 687..1349 100 <- Minus
arm_2R 17405486..17405902 270..686 100 <- Minus

BS07764.pep Sequence

Translation from 16 to 1350

> BS07764.pep
MVSREMARRNCPKSPKHLRVKFHQMRRQYARARNGGEPFEHFEAVHELMQ
GEDVSDLDEEALESDSDMEADEDQSGMISETEGDDALDASGSSVNIVARC
KWAEGEVDLLLDLIHTLGLRAALLQKRNAKVFKLLSKEMAKRNCHKGAEK
LRIKFQQLRRLYNKVKNGTGKTFEHFEAMRLVLDPTEEEAAADAEAEAHL
SSASDSDFNDSDEEEGDASQRSGAHFWTDEEVDSFLLIIRDNGFFRALDG
SRKRNFQTLVHISNILAKQDIKRTPHQLRNKLRLLCKRHREAKEHGLDNV
RILPRHFELFDELIQAPRENRESAISRLIRISKPSFLKPPGKPSVPLESD
SDNSSSTCDLLRAAADSEDYVDAIEMEAEPTPIEALTAIIEGQKQLLAQI
KTTNESFLRQQREQQHQFLEQVSELMHRDREETLRRISEMLQPK*

BS07764.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG10494-PA 523 CG10494-PA 80..523 1..444 2265 100 Plus
CG10494-PB 444 CG10494-PB 1..444 1..444 2265 100 Plus
CG10494-PA 523 CG10494-PA 28..271 83..324 298 34.8 Plus