Clone Sequence Records
BS07771.3prime Sequence
824 bp (785 high quality bases) assembled on 2006-01-06
> BS07771.3prime
ATGGTCTAGAAAGCTTTTACGTTTCATATACCTCAGAGCTTATCCTATCG
GTTTGGGAATAAGTCGAAGAAACTGTACCGGAATATTCTGCAGAATTCGT
GGCGGGCTCTGTGGGGGATTCTGGAGTCAAATTTGGTGTACACGCTACAT
TGGAATCTTGAACGGATTCCGTTTCGGAATCACCACCAGAACATGTGGTG
GAGTCCGAGAAAGAACTTGCGTTAGAATTTGCTGGGTGTTCTGCATGAAA
ATTTACTTCAGTACCAGATCCGTTTTTGCAATCCGTAAAGGAATCTATTG
ATGTGGTTGTAGAGGAGGATTCAGAAGAATCCAAATCGGAATCAAAAACG
GAATGGTTTTTAGCAAGCAAATCCAAATCCAACTCGACTGCCGAAGTATA
AAAGGTCTGTTTCACATTAGGAGCGGCATCCAAATCTTCGGTAGAACTTG
TACCTCCAACAGCACAGTTATATTCTCCAGGCTCCTTCAAATCTTCCGCG
GAATTTTCTGATGTCCATGATTCGTTTACCGTCAGTGCATCACCAATTTC
ATATTCCATATGGTCCTTCATTATCAATCGAGCTACAAAGCTTTTAGGTG
AATTTTGTATTTGCCGCAGATAGCGAAAAAATACATCTGGGGAGAGATCG
GAGTCACCGTTTGCATTGAAAAGTGATAAATATGGACACTGTGGATCCTG
AGCCCAGCGCCGATTGCCGCGTATTATAGATTCTGACTGAAAGGTTTCCG
TATAATATTCGAATTGGCTCAGCATCGCATTGTGTAGAAAGTGGCATAGG
ACATTCGCAAGTTCTGGTCGGAGA
BS07771.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10752-PA | 1620 | CG10752-RA | 813..1620 | 824..17 | 4040 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:50:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10752-RA | 1774 | CG10752-RA | 923..1730 | 824..17 | 4040 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:50:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12952730..12953537 | 17..824 | 4040 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 03:50:23 has no hits.
BS07771.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:16 Download gff for
BS07771.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-PA | 814..1620 | 17..823 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:17:08 Download gff for
BS07771.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-PA | 814..1620 | 17..823 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:53:42 Download gff for
BS07771.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 924..1739 | 5..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:56:26 Download gff for
BS07771.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 924..1739 | 5..823 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:56:26 Download gff for
BS07771.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12952721..12953536 | 5..823 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:53:42 Download gff for
BS07771.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12945821..12946636 | 5..823 | 99 | | Plus |
BS07771.5prime Sequence
891 bp (804 high quality bases) assembled on 2006-01-06
> BS07771.5prime
GAAGTTATCAGTCGACATGGATGTATCCCAGTCAGATGGCCCAACAGAAA
ATGAGGCTGGCGGAATGAAGAACATTACACATCAGTTCGAGTTCATGTCT
AATAGGTTGAAGGAGCATATGAAATACAACATCCTCCGTAACGCTGTGTT
TTACAAGAAGATTCCCCTGCAGAAGAAACTAAAACTTGCCCTTGAAAGAA
ATATCGGTCCCCATGCCTATATAATAGTTAACGATACAATCTACAAGTGC
CAAGTGTTCGTACTCCGCATCTACTGCAAGCTGTTTACCAACAACCTCAA
GCGGGGTGACATAGTCAAGTTTCCCAGGGACGCGATGAGCAATGAGTGCT
TTGAATTGGCCTATACCTGGATGACTAATAATGCGATACATTTGCCACGT
GACAAGATAATAAATTTGCTCGCGGCCGCAAAATGTTTGCAGTGCATTCC
CTTGATCAAGCGCATCTTTGAGTTTCTTAACGACTACCGAACCCATTGCG
AACTTTTTTCATTTAGCTGCTATTTGAAGGCCAAAGATATGGGTATGACC
CAGGTAGCCGACATGATGGTGTCCAGAGTGACCAAGTCCTTCCTGGTACT
AGTGTCCAATGGACAGTTCATTAAGATGGATATCGACGGCGCGTGCACTC
TGCTGAGATCGAGACACTTGGCTGTACAAAACGAGATCGAGATTTTTTAT
TCAGCTCTGCTCTGGCTAATATCAAACTATGAGATGCGCATAAAATACAT
TCCACGTGTTTTGAGCTTGGTAAGATTTCTTATGATTCCAGCCGTATTTA
TTCTTCAATGGACGAGCAATCTTAAAGATCTCCGACCAGAACTTGCGAAT
GTCCTATGCCACTTTCTACACAATGCGATGCTGAGCCAATT
BS07771.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10752-PA | 1620 | CG10752-RA | 1..875 | 17..891 | 4375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:06:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10752-RA | 1774 | CG10752-RA | 111..985 | 17..891 | 4375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:05:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12953863..12954537 | 691..17 | 3375 | 100 | Minus |
| 3L | 28110227 | 3L | 12953475..12953676 | 891..690 | 1010 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:06:00 has no hits.
BS07771.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:17 Download gff for
BS07771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-PA | 1..875 | 17..891 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:17:09 Download gff for
BS07771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-PA | 1..875 | 17..891 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:54:25 Download gff for
BS07771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 107..985 | 9..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:54:03 Download gff for
BS07771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 107..985 | 9..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:54:03 Download gff for
BS07771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12953475..12953674 | 692..891 | 100 | <- | Minus |
| 3L | 12953863..12954541 | 9..691 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:54:25 Download gff for
BS07771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12946575..12946774 | 692..891 | 100 | <- | Minus |
| arm_3L | 12946963..12947641 | 9..691 | 99 | | Minus |
BS07771.complete Sequence
1652 bp assembled on 2007-10-17
GenBank Submission: FJ635980
> BS07771.complete
GAAGTTATCAGTCGACATGGATGTATCCCAGTCAGATGGCCCAACAGAAA
ATGAGGCTGGCGGAATGAAGAACATTACACATCAGTTCGAGTTCATGTCT
AATAGGTTGAAGGAGCATATGAAATACAACATCCTCCGTAACGCTGTGTT
TTACAAGAAGATTCCCCTGCAGAAGAAACTAAAACTTGCCCTTGAAAGAA
ATATCGGTCCCCATGCCTATATAATAGTTAACGATACAATCTACAAGTGC
CAAGTGTTCGTACTCCGCATCTACTGCAAGCTGTTTACCAACAACCTCAA
GCGGGGTGACATAGTCAAGTTTCCCAGGGACGCGATGAGCAATGAGTGCT
TTGAATTGGCCTATACCTGGATGACTAATAATGCGATACATTTGCCACGT
GACAAGATAATAAATTTGCTCGCGGCCGCAAAATGTTTGCAGTGCATTCC
CTTGATCAAGCGCATCTTTGAGTTTCTTAACGACTACCGAACCCATTGCG
AACTTTTTTCATTTAGCTGCTATTTGAAGGCCAAAGATATGGGTATGACC
CAGGTAGCCGACATGATGGTGTCCAGAGTGACCAAGTCCTTCCTGGTACT
AGTGTCCAATGGACAGTTCATTAAGATGGATATCGACGGCGCGTGCACTC
TGCTGAGATCGAGACACTTGGCTGTACAAAACGAGATCGAGATTTTTTAT
TCAGCTCTGCTCTGGCTAATATCAAACTATGAGATGCGCATAAAATACAT
TCCACGTGTTTTGAGCTTGGTAAGATTTCTTATGATTCCAGCCGTATTTA
TTCTTCAATGGACGAGCAATCTTAAAGATCTCCGACCAGAACTTGCGAAT
GTCCTATGCCACTTTCTACACAATGCGATGCTGAGCCAATTCGAATATTA
TACGGAAACCTTTCAGTCAGAATCTATAATACGCGGCAATCGGCGCTGGG
CTCAGGATCCACAGTGTCCATATTTATCACTTTTCAATGCAAACGGTGAC
TCCGATCTCTCCCCAGATGTATTTTTTCGCTATCTGCGGCAAATACAAAA
TTCACCTAAAAGCTTTGTAGCTCGATTGATAATGAAGGACCATATGGAAT
ATGAAATTGGTGATGCACTGACGGTAAACGAATCATGGACATCAGAAAAT
TCCGCGGAAGATTTGAAGGAGCCTGGAGAATATAACTGTGCTGTTGGAGG
TACAAGTTCTACCGAAGATTTGGATGCCGCTCCTAATGTGAAACAGACCT
TTTATACTTCGGCAGTCGAGTTGGATTTGGATTTGCTTGCTAAAAACCAT
TCCGTTTTTGATTCCGATTTGGATTCTTCTGAATCCTCCTCTACAACCAC
ATCAATAGATTCCTTTACGGATTGCAAAAACGGATCTGGTACTGAAGTAA
ATTTTCATGCAGAACACCCAGCAAATTCTAACGCAAGTTCTTTCTCGGAC
TCCACCACATGTTCTGGTGGTGATTCCGAAACGGAATCCGTTCAAGATTC
CAATGTAGCGTGTACACCAAATTTGACTCCAGAATCCCCCACAGAGCCCG
CCACGAATTCTGCAGAATATTCCGGTACAGTTTCTTCGACTTATTCCCAA
ACCGATAGGATAAGCTCTGAGGTATATGAAACGTAAAAGCTTTCTAGACC
AT
BS07771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:33:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10752-RA | 1620 | CG10752-PA | 1..1620 | 17..1636 | 8100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:33:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10752-RA | 1774 | CG10752-RA | 111..1730 | 17..1636 | 8100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:33:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12952730..12953676 | 1636..690 | 4735 | 100 | Minus |
| 3L | 28110227 | 3L | 12953863..12954537 | 691..17 | 3375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:33:02 has no hits.
BS07771.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:08:08 Download gff for
BS07771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 1..1620 | 17..1636 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:37:41 Download gff for
BS07771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 22..1654 | 9..1648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:25 Download gff for
BS07771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 111..1728 | 17..1634 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:42:43 Download gff for
BS07771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 26..1643 | 17..1634 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:35 Download gff for
BS07771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10752-RA | 111..1728 | 17..1634 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:35 Download gff for
BS07771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12952732..12953674 | 692..1634 | 100 | <- | Minus |
| 3L | 12953863..12954537 | 17..691 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:25 Download gff for
BS07771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12945832..12946774 | 692..1634 | 100 | <- | Minus |
| arm_3L | 12946963..12947637 | 17..691 | 100 | | Minus |
BS07771.pep Sequence
Translation from 16 to 1635
> BS07771.pep
MDVSQSDGPTENEAGGMKNITHQFEFMSNRLKEHMKYNILRNAVFYKKIP
LQKKLKLALERNIGPHAYIIVNDTIYKCQVFVLRIYCKLFTNNLKRGDIV
KFPRDAMSNECFELAYTWMTNNAIHLPRDKIINLLAAAKCLQCIPLIKRI
FEFLNDYRTHCELFSFSCYLKAKDMGMTQVADMMVSRVTKSFLVLVSNGQ
FIKMDIDGACTLLRSRHLAVQNEIEIFYSALLWLISNYEMRIKYIPRVLS
LVRFLMIPAVFILQWTSNLKDLRPELANVLCHFLHNAMLSQFEYYTETFQ
SESIIRGNRRWAQDPQCPYLSLFNANGDSDLSPDVFFRYLRQIQNSPKSF
VARLIMKDHMEYEIGDALTVNESWTSENSAEDLKEPGEYNCAVGGTSSTE
DLDAAPNVKQTFYTSAVELDLDLLAKNHSVFDSDLDSSESSSTTTSIDSF
TDCKNGSGTEVNFHAEHPANSNASSFSDSTTCSGGDSETESVQDSNVACT
PNLTPESPTEPATNSAEYSGTVSSTYSQTDRISSEVYET*
BS07771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:16:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10752-PA | 539 | CG10752-PA | 1..539 | 1..539 | 2816 | 100 | Plus |
| CG12857-PA | 440 | CG12857-PA | 104..419 | 55..358 | 244 | 22.6 | Plus |
| CG30357-PA | 451 | CG30357-PA | 110..423 | 48..350 | 217 | 21.3 | Plus |
| CG9970-PA | 484 | CG9970-PA | 141..344 | 59..262 | 196 | 29 | Plus |
| CG12857-PB | 293 | CG12857-PB | 104..277 | 55..227 | 168 | 25.3 | Plus |
